RNA–Protein interactions for RNA: ENST00000561379.1

IPO4-219, Transcript of importin 4, humanhuman

TSL 4

Gene IPO4, Length 624 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IPO4-219ENST00000561379 NISCHQ9Y2I1 1504 aa37.29■■■■□ 3.56
IPO4-219ENST00000561379 ABCC9O60706 1549 aa33.63■■■□□ 2.97
IPO4-219ENST00000561379 CCDC180Q9P1Z9 1646 aa33.53■■■□□ 2.96
IPO4-219ENST00000561379 RB1CC1Q8TDY2 1594 aa31.96■■■□□ 2.71
IPO4-219ENST00000561379 NACADO15069 1562 aa31.7■■■□□ 2.67
IPO4-219ENST00000561379 DCAF8L2P0C7V8 631 aa31.58■■■□□ 2.65
IPO4-219ENST00000561379 DNAJC5BQ9UF47 199 aa31.58■■■□□ 2.65
IPO4-219ENST00000561379 PABPN1Q86U42 306 aaKnown RBP eCLIP31.29■■■□□ 2.66e-8■■■□□ 17
IPO4-219ENST00000561379 UNC13AQ9UPW8 1703 aa31.26■■■□□ 2.59
IPO4-219ENST00000561379 MYO15BQ96JP2 1530 aa31.2■■■□□ 2.59
IPO4-219ENST00000561379 BICRAQ9NZM4 1560 aa31■■■□□ 2.55
IPO4-219ENST00000561379 ZCCHC6Q5VYS8 1495 aaKnown RBP30.89■■■□□ 2.53
IPO4-219ENST00000561379 DCAF1Q9Y4B6 1507 aa30.78■■■□□ 2.52
IPO4-219ENST00000561379 SCRIBQ14160 1630 aa30.57■■■□□ 2.48
IPO4-219ENST00000561379 SHROOM4Q9ULL8 1493 aa30.57■■■□□ 2.48
IPO4-219ENST00000561379 CC2D2AQ9P2K1 1620 aa30.36■■■□□ 2.45
IPO4-219ENST00000561379 CECR2Q9BXF3 1484 aa30.29■■■□□ 2.44
IPO4-219ENST00000561379 EIF4G1Q04637 1599 aaKnown RBP30.27■■■□□ 2.44
IPO4-219ENST00000561379 NCAPD3P42695 1498 aa29.25■■■□□ 2.27
IPO4-219ENST00000561379 ATAD2BQ9ULI0 1458 aa29.16■■■□□ 2.26
IPO4-219ENST00000561379 SMARCA4P51532 1647 aa29.13■■■□□ 2.25
IPO4-219ENST00000561379 SMARCA2P51531 1590 aa29.09■■■□□ 2.25
IPO4-219ENST00000561379 DNAJC5Q9H3Z4 198 aa29.07■■■□□ 2.24
IPO4-219ENST00000561379 ERCC6Q03468 1493 aa29.05■■■□□ 2.24
IPO4-219ENST00000561379 HMGXB3Q12766 1538 aa29.04■■■□□ 2.24
IPO4-219ENST00000561379 CUX2O14529 1486 aa28.99■■■□□ 2.23
IPO4-219ENST00000561379 BAZ1AQ9NRL2 1556 aaPredicted RBP28.97■■■□□ 2.23
IPO4-219ENST00000561379 BAZ1BQ9UIG0 1483 aaKnown RBP28.9■■■□□ 2.22
IPO4-219ENST00000561379 NESP48681 1621 aa28.85■■■□□ 2.21
IPO4-219ENST00000561379 PEG3Q9GZU2 1588 aa28.81■■■□□ 2.2
IPO4-219ENST00000561379 MROH2BQ7Z745 1585 aa28.75■■■□□ 2.19
IPO4-219ENST00000561379 LAMC3Q9Y6N6 1575 aa28.63■■■□□ 2.17
IPO4-219ENST00000561379 THOC2Q8NI27 1593 aaKnown RBP28.58■■■□□ 2.17
IPO4-219ENST00000561379 KIF21AQ7Z4S6 1674 aa28.5■■■□□ 2.15
IPO4-219ENST00000561379 PDS5BQ9NTI5 1447 aa28.47■■■□□ 2.15
IPO4-219ENST00000561379 WIZO95785 1651 aa28.42■■■□□ 2.14
IPO4-219ENST00000561379 CADPSQ9ULU8 1353 aa28.37■■■□□ 2.13
IPO4-219ENST00000561379 MRC2Q9UBG0 1479 aa28.23■■■□□ 2.11
IPO4-219ENST00000561379 WDR62O43379 1518 aa28.16■■■□□ 2.1
IPO4-219ENST00000561379 CEP164Q9UPV0 1460 aa28.11■■■□□ 2.09
IPO4-219ENST00000561379 RSF1Q96T23 1441 aaPredicted RBP28.09■■■□□ 2.09
IPO4-219ENST00000561379 FANCD2Q9BXW9 1451 aa28.06■■■□□ 2.08
IPO4-219ENST00000561379 TOP2AP11388 1531 aaKnown RBP28.04■■■□□ 2.08
IPO4-219ENST00000561379 CFTRP13569 1480 aa28.02■■■□□ 2.08
IPO4-219ENST00000561379 URB2Q14146 1524 aaKnown RBP27.83■■■□□ 2.05
IPO4-219ENST00000561379 TRIM41Q8WV44 630 aa27.82■■■□□ 2.04
IPO4-219ENST00000561379 PRDM2Q13029 1718 aa27.79■■■□□ 2.04
IPO4-219ENST00000561379 CCDC88BA6NC98 1476 aa27.71■■■□□ 2.03
IPO4-219ENST00000561379 OSCARQ8IYS5 282 aa27.67■■■□□ 2.02
IPO4-219ENST00000561379 IFT140Q96RY7 1462 aa27.55■■■□□ 2
IPO4-219ENST00000561379 TOPBP1Q92547 1522 aa27.52■■■□□ 2
IPO4-219ENST00000561379 ZNF608Q9ULD9 1512 aaPredicted RBP27.51■■□□□ 1.99
IPO4-219ENST00000561379 ABCC8Q09428 1581 aa27.45■■□□□ 1.99
IPO4-219ENST00000561379 DNMBPQ6XZF7 1577 aa27.42■■□□□ 1.98
IPO4-219ENST00000561379 EIF4G3O43432 1585 aaKnown RBP27.37■■□□□ 1.97
IPO4-219ENST00000561379 RIMBP3CA6NJZ7 1639 aa27.34■■□□□ 1.97
IPO4-219ENST00000561379 RIMBP3BA6NNM3 1639 aa27.34■■□□□ 1.97
IPO4-219ENST00000561379 RIMBP3Q9UFD9 1639 aa27.34■■□□□ 1.97
IPO4-219ENST00000561379 TARBP1Q13395 1621 aaKnown RBP27.27■■□□□ 1.96
IPO4-219ENST00000561379 AQRO60306 1485 aaKnown RBP eCLIP27.25■■□□□ 1.95
IPO4-219ENST00000561379 POLA1P09884 1462 aaPredicted RBP27.23■■□□□ 1.95
IPO4-219ENST00000561379 ARHGEF11O15085 1522 aa27.22■■□□□ 1.95
IPO4-219ENST00000561379 CHD1O14646 1710 aa27.21■■□□□ 1.95
IPO4-219ENST00000561379 RAD54L2Q9Y4B4 1467 aa27.14■■□□□ 1.94
IPO4-219ENST00000561379 FBLN2P98095 1184 aa27.13■■□□□ 1.93
IPO4-219ENST00000561379 SOGA1O94964 1423 aa27.11■■□□□ 1.93
IPO4-219ENST00000561379 TDRD9Q8NDG6 1382 aaKnown RBP27.08■■□□□ 1.93
IPO4-219ENST00000561379 FGD5Q6ZNL6 1462 aa27.06■■□□□ 1.92
IPO4-219ENST00000561379 CYB5RLQ6IPT4 315 aa27.04■■□□□ 1.92
IPO4-219ENST00000561379 CUX1P39880 1505 aa27■■□□□ 1.91
IPO4-219ENST00000561379 WDR97A6NE52 1622 aa26.99■■□□□ 1.91
IPO4-219ENST00000561379 SNAPC4Q5SXM2 1469 aa26.98■■□□□ 1.91
IPO4-219ENST00000561379 ARAP1Q96P48 1450 aa26.94■■□□□ 1.9
IPO4-219ENST00000561379 MAGI1Q96QZ7 1491 aaPredicted RBP26.89■■□□□ 1.9
IPO4-219ENST00000561379 CHMP7Q8WUX9 453 aaPredicted RBP26.89■■□□□ 1.9
IPO4-219ENST00000561379 GRIN2BQ13224 1484 aa26.88■■□□□ 1.89
IPO4-219ENST00000561379 SYNJ1O43426 1573 aa26.85■■□□□ 1.89
IPO4-219ENST00000561379 SUPT5HO00267 1087 aaKnown RBP26.85■■□□□ 1.89
IPO4-219ENST00000561379 CLASP1Q7Z460 1538 aa26.85■■□□□ 1.89
IPO4-219ENST00000561379 PBRM1Q86U86 1689 aa26.81■■□□□ 1.88
IPO4-219ENST00000561379 SYNJ2O15056 1496 aa26.81■■□□□ 1.88
IPO4-219ENST00000561379 TRHP20396 242 aaPredicted RBP26.8■■□□□ 1.88
IPO4-219ENST00000561379 GAPVD1Q14C86 1478 aa26.78■■□□□ 1.88
IPO4-219ENST00000561379 ABCA10Q8WWZ4 1543 aa26.73■■□□□ 1.87
IPO4-219ENST00000561379 ABCA5Q8WWZ7 1642 aa26.71■■□□□ 1.87
IPO4-219ENST00000561379 WRNQ14191 1432 aaPredicted RBP eCLIP26.61■■□□□ 1.85
IPO4-219ENST00000561379 BIVM-ERCC5R4GMW8 1640 aa26.57■■□□□ 1.84
IPO4-219ENST00000561379 TOP2BQ02880 1626 aa26.56■■□□□ 1.84
IPO4-219ENST00000561379 GRIN2AQ12879 1464 aa26.55■■□□□ 1.84
IPO4-219ENST00000561379 ADAMTS12P58397 1594 aa26.53■■□□□ 1.84
IPO4-219ENST00000561379 CEP170Q5SW79 1584 aa26.46■■□□□ 1.83
IPO4-219ENST00000561379 FHAD1B1AJZ9 1412 aa26.44■■□□□ 1.82
IPO4-219ENST00000561379 NUP160Q12769 1436 aa26.44■■□□□ 1.82
IPO4-219ENST00000561379 ERCC6L2Q5T890 1561 aa26.44■■□□□ 1.82
IPO4-219ENST00000561379 ERICH3Q5RHP9 1530 aa26.39■■□□□ 1.82
IPO4-219ENST00000561379 SHROOM2Q13796 1616 aa26.34■■□□□ 1.81
IPO4-219ENST00000561379 PRG4Q92954 1404 aaPredicted RBP26.22■■□□□ 1.79
IPO4-219ENST00000561379 JPH4Q96JJ6 628 aa26.18■■□□□ 1.78
IPO4-219ENST00000561379 RUSC2Q8N2Y8 1516 aa26.15■■□□□ 1.78
IPO4-219ENST00000561379 AEBP2Q6ZN18 517 aaPredicted RBP26.09■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms