RNA–Protein interactions for RNA: ENST00000507273.5

RACK1-216, Transcript of receptor for activated C kinase 1, humanhuman

TSL 2

Gene RACK1, Length 358 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACK1-216ENST00000507273 NISCHQ9Y2I1 1504 aa20.79■□□□□ 0.92
RACK1-216ENST00000507273 CCDC180Q9P1Z9 1646 aa18.58■□□□□ 0.56
RACK1-216ENST00000507273 ABCC9O60706 1549 aa18.27■□□□□ 0.51
RACK1-216ENST00000507273 RB1CC1Q8TDY2 1594 aa17.5■□□□□ 0.39
RACK1-216ENST00000507273 NACADO15069 1562 aa17.46■□□□□ 0.39
RACK1-216ENST00000507273 MYO15BQ96JP2 1530 aa17.32■□□□□ 0.36
RACK1-216ENST00000507273 ZCCHC6Q5VYS8 1495 aaKnown RBP17.31■□□□□ 0.36
RACK1-216ENST00000507273 DCAF8L2P0C7V8 631 aa17.3■□□□□ 0.36
RACK1-216ENST00000507273 UNC13AQ9UPW8 1703 aa17.24■□□□□ 0.35
RACK1-216ENST00000507273 DCAF1Q9Y4B6 1507 aa17.21■□□□□ 0.34
RACK1-216ENST00000507273 BICRAQ9NZM4 1560 aa17.07■□□□□ 0.32
RACK1-216ENST00000507273 PABPN1Q86U42 306 aaKnown RBP eCLIP17.02■□□□□ 0.32
RACK1-216ENST00000507273 DNAJC5BQ9UF47 199 aa16.95■□□□□ 0.3
RACK1-216ENST00000507273 SCRIBQ14160 1630 aa16.92■□□□□ 0.3
RACK1-216ENST00000507273 SHROOM4Q9ULL8 1493 aa16.79■□□□□ 0.28
RACK1-216ENST00000507273 EIF4G1Q04637 1599 aaKnown RBP16.58■□□□□ 0.24
RACK1-216ENST00000507273 CC2D2AQ9P2K1 1620 aa16.56■□□□□ 0.24
RACK1-216ENST00000507273 CECR2Q9BXF3 1484 aa16.42■□□□□ 0.22
RACK1-216ENST00000507273 SMARCA4P51532 1647 aa16.19■□□□□ 0.18
RACK1-216ENST00000507273 NCAPD3P42695 1498 aa16.11■□□□□ 0.17
RACK1-216ENST00000507273 ATAD2BQ9ULI0 1458 aa16.11■□□□□ 0.17
RACK1-216ENST00000507273 BAZ1AQ9NRL2 1556 aaPredicted RBP16.1■□□□□ 0.17
RACK1-216ENST00000507273 SMARCA2P51531 1590 aa16.06■□□□□ 0.16
RACK1-216ENST00000507273 PEG3Q9GZU2 1588 aa16.04■□□□□ 0.16
RACK1-216ENST00000507273 MROH2BQ7Z745 1585 aa16.04■□□□□ 0.16
RACK1-216ENST00000507273 HMGXB3Q12766 1538 aa16.04■□□□□ 0.16
RACK1-216ENST00000507273 BAZ1BQ9UIG0 1483 aaKnown RBP15.93■□□□□ 0.14
RACK1-216ENST00000507273 WIZO95785 1651 aa15.88■□□□□ 0.13
RACK1-216ENST00000507273 NESP48681 1621 aa15.8■□□□□ 0.12
RACK1-216ENST00000507273 RSF1Q96T23 1441 aaPredicted RBP15.78■□□□□ 0.12
RACK1-216ENST00000507273 LAMC3Q9Y6N6 1575 aa15.71■□□□□ 0.11
RACK1-216ENST00000507273 ERCC6Q03468 1493 aa15.71■□□□□ 0.1
RACK1-216ENST00000507273 TOP2AP11388 1531 aaKnown RBP15.67■□□□□ 0.1
RACK1-216ENST00000507273 KIF21AQ7Z4S6 1674 aa15.65■□□□□ 0.1
RACK1-216ENST00000507273 CUX2O14529 1486 aa15.64■□□□□ 0.09
RACK1-216ENST00000507273 THOC2Q8NI27 1593 aaKnown RBP15.62■□□□□ 0.09
RACK1-216ENST00000507273 CADPSQ9ULU8 1353 aa15.62■□□□□ 0.09
RACK1-216ENST00000507273 PDS5BQ9NTI5 1447 aa15.56■□□□□ 0.08
RACK1-216ENST00000507273 CFTRP13569 1480 aa15.52■□□□□ 0.08
RACK1-216ENST00000507273 CCDC88BA6NC98 1476 aa15.47■□□□□ 0.07
RACK1-216ENST00000507273 PRDM2Q13029 1718 aa15.46■□□□□ 0.07
RACK1-216ENST00000507273 MRC2Q9UBG0 1479 aa15.45■□□□□ 0.06
RACK1-216ENST00000507273 WDR62O43379 1518 aa15.44■□□□□ 0.06
RACK1-216ENST00000507273 FANCD2Q9BXW9 1451 aa15.44■□□□□ 0.06
RACK1-216ENST00000507273 CEP164Q9UPV0 1460 aa15.42■□□□□ 0.06
RACK1-216ENST00000507273 URB2Q14146 1524 aaKnown RBP15.34■□□□□ 0.05
RACK1-216ENST00000507273 DNAJC5Q9H3Z4 198 aa15.32■□□□□ 0.04
RACK1-216ENST00000507273 TOPBP1Q92547 1522 aa15.2■□□□□ 0.02
RACK1-216ENST00000507273 DNMBPQ6XZF7 1577 aa15.17■□□□□ 0.02
RACK1-216ENST00000507273 SUPT5HO00267 1087 aaKnown RBP15.17■□□□□ 0.02
RACK1-216ENST00000507273 ABCC8Q09428 1581 aa15.14■□□□□ 0.01
RACK1-216ENST00000507273 IFT140Q96RY7 1462 aa15.11■□□□□ 0.01
RACK1-216ENST00000507273 ZNF608Q9ULD9 1512 aaPredicted RBP15.1■□□□□ 0.01
RACK1-216ENST00000507273 TARBP1Q13395 1621 aaKnown RBP15.09■□□□□ 0.01
RACK1-216ENST00000507273 POLA1P09884 1462 aaPredicted RBP15.07■□□□□ 0
RACK1-216ENST00000507273 CUX1P39880 1505 aa15.05■□□□□ -0
RACK1-216ENST00000507273 EIF4G3O43432 1585 aaKnown RBP15.04■□□□□ -0
RACK1-216ENST00000507273 RAD54L2Q9Y4B4 1467 aa15.01□□□□□ -0.01
RACK1-216ENST00000507273 FGD5Q6ZNL6 1462 aa15□□□□□ -0.01
RACK1-216ENST00000507273 AQRO60306 1485 aaKnown RBP eCLIP14.97□□□□□ -0.012e-11■■■■■ 35.2
RACK1-216ENST00000507273 WDR97A6NE52 1622 aa14.96□□□□□ -0.01
RACK1-216ENST00000507273 SOGA1O94964 1423 aa14.95□□□□□ -0.02
RACK1-216ENST00000507273 OSCARQ8IYS5 282 aa14.91□□□□□ -0.02
RACK1-216ENST00000507273 CHD1O14646 1710 aa14.91□□□□□ -0.02
RACK1-216ENST00000507273 BIVM-ERCC5R4GMW8 1640 aa14.9□□□□□ -0.02
RACK1-216ENST00000507273 TDRD9Q8NDG6 1382 aaKnown RBP14.89□□□□□ -0.03
RACK1-216ENST00000507273 SYNJ1O43426 1573 aa14.89□□□□□ -0.03
RACK1-216ENST00000507273 TOP2BQ02880 1626 aa14.88□□□□□ -0.03
RACK1-216ENST00000507273 ABCA10Q8WWZ4 1543 aa14.85□□□□□ -0.03
RACK1-216ENST00000507273 ABCA5Q8WWZ7 1642 aa14.84□□□□□ -0.03
RACK1-216ENST00000507273 WRNQ14191 1432 aaPredicted RBP eCLIP14.84□□□□□ -0.03
RACK1-216ENST00000507273 PBRM1Q86U86 1689 aa14.84□□□□□ -0.03
RACK1-216ENST00000507273 SNAPC4Q5SXM2 1469 aa14.82□□□□□ -0.04
RACK1-216ENST00000507273 GRIN2BQ13224 1484 aa14.81□□□□□ -0.04
RACK1-216ENST00000507273 GAPVD1Q14C86 1478 aa14.8□□□□□ -0.04
RACK1-216ENST00000507273 RIMBP3CA6NJZ7 1639 aa14.79□□□□□ -0.04
RACK1-216ENST00000507273 RIMBP3BA6NNM3 1639 aa14.79□□□□□ -0.04
RACK1-216ENST00000507273 MAGI1Q96QZ7 1491 aaPredicted RBP14.79□□□□□ -0.04
RACK1-216ENST00000507273 RIMBP3Q9UFD9 1639 aa14.79□□□□□ -0.04
RACK1-216ENST00000507273 ARHGEF11O15085 1522 aa14.74□□□□□ -0.05
RACK1-216ENST00000507273 SYNJ2O15056 1496 aa14.74□□□□□ -0.05
RACK1-216ENST00000507273 CLASP1Q7Z460 1538 aa14.73□□□□□ -0.05
RACK1-216ENST00000507273 FBLN2P98095 1184 aa14.72□□□□□ -0.05
RACK1-216ENST00000507273 TRIM41Q8WV44 630 aa14.7□□□□□ -0.06
RACK1-216ENST00000507273 ADAMTS12P58397 1594 aa14.69□□□□□ -0.06
RACK1-216ENST00000507273 CHMP7Q8WUX9 453 aaPredicted RBP14.68□□□□□ -0.06
RACK1-216ENST00000507273 ERICH3Q5RHP9 1530 aa14.66□□□□□ -0.06
RACK1-216ENST00000507273 GRIN2AQ12879 1464 aa14.63□□□□□ -0.07
RACK1-216ENST00000507273 ARAP1Q96P48 1450 aa14.63□□□□□ -0.07
RACK1-216ENST00000507273 CEP170Q5SW79 1584 aa14.61□□□□□ -0.07
RACK1-216ENST00000507273 FHAD1B1AJZ9 1412 aa14.61□□□□□ -0.07
RACK1-216ENST00000507273 NUP160Q12769 1436 aa14.59□□□□□ -0.07
RACK1-216ENST00000507273 CYB5RLQ6IPT4 315 aa14.55□□□□□ -0.08
RACK1-216ENST00000507273 SHROOM2Q13796 1616 aa14.55□□□□□ -0.08
RACK1-216ENST00000507273 ERCC6L2Q5T890 1561 aa14.53□□□□□ -0.08
RACK1-216ENST00000507273 KIF27Q86VH2 1401 aa14.52□□□□□ -0.08
RACK1-216ENST00000507273 IGF1RP08069 1367 aa14.52□□□□□ -0.08
RACK1-216ENST00000507273 CUL7Q14999 1698 aa14.51□□□□□ -0.09
RACK1-216ENST00000507273 RUSC2Q8N2Y8 1516 aa14.49□□□□□ -0.09
RACK1-216ENST00000507273 CARMIL1Q5VZK9 1371 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms