RNA–Protein interactions for RNA: ENST00000496634.2

AP002990.1-202, humanhuman

APPRIS P1 TSL 2 BASIC

Gene AP002990.1, Length 5,064 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP002990.1-202ENST00000496634 NISCHQ9Y2I1 1504 aa26.56■■□□□ 1.84
AP002990.1-202ENST00000496634 DCAF8L2P0C7V8 631 aa26.46■■□□□ 1.83
AP002990.1-202ENST00000496634 SUPT5HO00267 1087 aaKnown RBP25.01■■□□□ 1.59
AP002990.1-202ENST00000496634 SHROOM4Q9ULL8 1493 aa24.87■■□□□ 1.57
AP002990.1-202ENST00000496634 EHMT2Q96KQ7 1210 aa23.88■■□□□ 1.41
AP002990.1-202ENST00000496634 FAM9AQ8IZU1 332 aaPredicted RBP23.5■■□□□ 1.35
AP002990.1-202ENST00000496634 APLP2Q06481 763 aa23.39■■□□□ 1.33
AP002990.1-202ENST00000496634 TRIM41Q8WV44 630 aa23.25■■□□□ 1.31
AP002990.1-202ENST00000496634 TTBK1Q5TCY1 1321 aaPredicted RBP23.01■■□□□ 1.27
AP002990.1-202ENST00000496634 RANGAP1P46060 587 aaPredicted RBP22.98■■□□□ 1.27
AP002990.1-202ENST00000496634 PCGF6Q9BYE7 350 aa22.9■■□□□ 1.26
AP002990.1-202ENST00000496634 UBTFP17480 764 aaKnown RBP22.85■■□□□ 1.25
AP002990.1-202ENST00000496634 ABCC9O60706 1549 aa22.81■■□□□ 1.24
AP002990.1-202ENST00000496634 ATP1B4Q9UN42 357 aaPredicted RBP22.72■■□□□ 1.23
AP002990.1-202ENST00000496634 PABPN1Q86U42 306 aaKnown RBP eCLIP22.5■■□□□ 1.19
AP002990.1-202ENST00000496634 CCER1Q8TC90 406 aaPredicted RBP22.47■■□□□ 1.19
AP002990.1-202ENST00000496634 CHIC1Q5VXU3 224 aa22.47■■□□□ 1.19
AP002990.1-202ENST00000496634 ZEB1P37275 1124 aaPredicted RBP22.41■■□□□ 1.18
AP002990.1-202ENST00000496634 PPARGC1BQ86YN6 1023 aaKnown RBP22.33■■□□□ 1.17
AP002990.1-202ENST00000496634 LOC105371045A0A1W2PR82 267 aa22.27■■□□□ 1.16
AP002990.1-202ENST00000496634 PELP1Q8IZL8 1130 aaKnown RBP22.27■■□□□ 1.16
AP002990.1-202ENST00000496634 TRIM26Q12899 539 aaPredicted RBP22.15■■□□□ 1.14
AP002990.1-202ENST00000496634 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.05■■□□□ 1.12
AP002990.1-202ENST00000496634 HNRNPUL2Q1KMD3 747 aaKnown RBP22.05■■□□□ 1.12
AP002990.1-202ENST00000496634 ZCCHC6Q5VYS8 1495 aaKnown RBP22.01■■□□□ 1.11
AP002990.1-202ENST00000496634 ITGAEP38570 1179 aa21.97■■□□□ 1.11
AP002990.1-202ENST00000496634 CCDC180Q9P1Z9 1646 aa21.95■■□□□ 1.1
AP002990.1-202ENST00000496634 CENPBP07199 599 aaPredicted RBP21.94■■□□□ 1.1
AP002990.1-202ENST00000496634 SCRIBQ14160 1630 aa21.85■■□□□ 1.09
AP002990.1-202ENST00000496634 MYT1LQ9UL68 1186 aa21.8■■□□□ 1.08
AP002990.1-202ENST00000496634 HRCP23327 699 aa21.69■■□□□ 1.06
AP002990.1-202ENST00000496634 YTHDC1Q96MU7 727 aaKnown RBP21.62■■□□□ 1.05
AP002990.1-202ENST00000496634 FAM50AQ14320 339 aaKnown RBP21.54■■□□□ 1.04
AP002990.1-202ENST00000496634 CSRNP3Q8WYN3 585 aa21.53■■□□□ 1.04
AP002990.1-202ENST00000496634 FBLN2P98095 1184 aa21.52■■□□□ 1.04
AP002990.1-202ENST00000496634 NEFLP07196 543 aa21.48■■□□□ 1.03
AP002990.1-202ENST00000496634 POLR3GLQ9BT43 218 aa21.46■■□□□ 1.03
AP002990.1-202ENST00000496634 RB1CC1Q8TDY2 1594 aa21.45■■□□□ 1.03
AP002990.1-202ENST00000496634 P3H3Q8IVL6 736 aa21.33■■□□□ 1.01
AP002990.1-202ENST00000496634 TRIM52Q96A61 297 aa21.32■■□□□ 1
AP002990.1-202ENST00000496634 NACADO15069 1562 aa21.31■■□□□ 1
AP002990.1-202ENST00000496634 ERICH6Q7L0X2 663 aa21.24■□□□□ 0.99
AP002990.1-202ENST00000496634 CNGB1Q14028 1251 aaPredicted RBP21.21■□□□□ 0.99
AP002990.1-202ENST00000496634 ARID3CA6NKF2 412 aa21.19■□□□□ 0.98
AP002990.1-202ENST00000496634 NEUROD1Q13562 356 aa21.18■□□□□ 0.98
AP002990.1-202ENST00000496634 RSF1Q96T23 1441 aaPredicted RBP21.17■□□□□ 0.98
AP002990.1-202ENST00000496634 DIEXFQ68CQ4 756 aaKnown RBP21.1■□□□□ 0.97
AP002990.1-202ENST00000496634 DCAF1Q9Y4B6 1507 aa21.06■□□□□ 0.96
AP002990.1-202ENST00000496634 SLC4A1APQ9BWU0 796 aaKnown RBP21.05■□□□□ 0.96
AP002990.1-202ENST00000496634 CDK11AQ9UQ88 783 aaPredicted RBP21.05■□□□□ 0.96
AP002990.1-202ENST00000496634 ZNF777Q9ULD5 760 aaPredicted RBP20.98■□□□□ 0.95
AP002990.1-202ENST00000496634 ZNF326Q5BKZ1 582 aaKnown RBP20.98■□□□□ 0.95
AP002990.1-202ENST00000496634 BAZ1BQ9UIG0 1483 aaKnown RBP20.95■□□□□ 0.95
AP002990.1-202ENST00000496634 BAZ1AQ9NRL2 1556 aaPredicted RBP20.86■□□□□ 0.93
AP002990.1-202ENST00000496634 CECR2Q9BXF3 1484 aa20.83■□□□□ 0.93
AP002990.1-202ENST00000496634 WRNQ14191 1432 aaPredicted RBP eCLIP20.82■□□□□ 0.92
AP002990.1-202ENST00000496634 CHMP7Q8WUX9 453 aaPredicted RBP20.81■□□□□ 0.92
AP002990.1-202ENST00000496634 ZNF316A6NFI3 1004 aaPredicted RBP20.79■□□□□ 0.92
AP002990.1-202ENST00000496634 EEA1Q15075 1411 aa20.79■□□□□ 0.92
AP002990.1-202ENST00000496634 CLIP1P30622 1438 aa20.77■□□□□ 0.92
AP002990.1-202ENST00000496634 ANP32CO43423 234 aa20.76■□□□□ 0.91
AP002990.1-202ENST00000496634 NPM1P06748 294 aaKnown RBP eCLIP20.75■□□□□ 0.91
AP002990.1-202ENST00000496634 GOLGA3Q08378 1498 aa20.69■□□□□ 0.9
AP002990.1-202ENST00000496634 MTUS2Q5JR59 1369 aa20.68■□□□□ 0.9
AP002990.1-202ENST00000496634 MYO15BQ96JP2 1530 aa20.66■□□□□ 0.9
AP002990.1-202ENST00000496634 KIF27Q86VH2 1401 aa20.65■□□□□ 0.9
AP002990.1-202ENST00000496634 CHIC2Q9UKJ5 165 aa20.64■□□□□ 0.89
AP002990.1-202ENST00000496634 DAXXQ9UER7 740 aaPredicted RBP20.63■□□□□ 0.89
AP002990.1-202ENST00000496634 CEP162Q5TB80 1403 aa20.61■□□□□ 0.89
AP002990.1-202ENST00000496634 TONSLQ96HA7 1378 aa20.61■□□□□ 0.89
AP002990.1-202ENST00000496634 BCANQ96GW7 911 aa20.6■□□□□ 0.89
AP002990.1-202ENST00000496634 MROH2BQ7Z745 1585 aa20.56■□□□□ 0.88
AP002990.1-202ENST00000496634 ESF1Q9H501 851 aaKnown RBP20.56■□□□□ 0.88
AP002990.1-202ENST00000496634 TSPY4P0CV99 314 aa20.55■□□□□ 0.88
AP002990.1-202ENST00000496634 TSPY10P0CW01 314 aa20.55■□□□□ 0.88
AP002990.1-202ENST00000496634 CEP164Q9UPV0 1460 aa20.53■□□□□ 0.88
AP002990.1-202ENST00000496634 TNIKQ9UKE5 1360 aa20.52■□□□□ 0.87
AP002990.1-202ENST00000496634 CHGAP10645 457 aaKnown RBP20.5■□□□□ 0.87
AP002990.1-202ENST00000496634 ERCC6Q03468 1493 aa20.49■□□□□ 0.87
AP002990.1-202ENST00000496634 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.48■□□□□ 0.87
AP002990.1-202ENST00000496634 CLSPNQ9HAW4 1339 aa20.46■□□□□ 0.87
AP002990.1-202ENST00000496634 PLEKHD1A6NEE1 506 aa20.44■□□□□ 0.86
AP002990.1-202ENST00000496634 STAG3Q9UJ98 1225 aa20.44■□□□□ 0.86
AP002990.1-202ENST00000496634 CCDC88BA6NC98 1476 aa20.44■□□□□ 0.86
AP002990.1-202ENST00000496634 SMARCA2P51531 1590 aa20.42■□□□□ 0.86
AP002990.1-202ENST00000496634 KCNH8Q96L42 1107 aa20.4■□□□□ 0.86
AP002990.1-202ENST00000496634 RRP7BPQ9NSQ0 103 aa20.37■□□□□ 0.85
AP002990.1-202ENST00000496634 GTF3C3Q9Y5Q9 886 aa20.37■□□□□ 0.85
AP002990.1-202ENST00000496634 CUX2O14529 1486 aa20.36■□□□□ 0.85
AP002990.1-202ENST00000496634 SOGA1O94964 1423 aa20.36■□□□□ 0.85
AP002990.1-202ENST00000496634 NEFMP07197 916 aa20.35■□□□□ 0.85
AP002990.1-202ENST00000496634 CARMIL1Q5VZK9 1371 aa20.33■□□□□ 0.85
AP002990.1-202ENST00000496634 DDX10Q13206 875 aaKnown RBP20.32■□□□□ 0.84
AP002990.1-202ENST00000496634 PLPPR3Q6T4P5 718 aa20.32■□□□□ 0.84
AP002990.1-202ENST00000496634 CFDP1Q9UEE9 299 aaPredicted RBP20.28■□□□□ 0.84
AP002990.1-202ENST00000496634 KDM2AQ9Y2K7 1162 aa20.28■□□□□ 0.84
AP002990.1-202ENST00000496634 ABCC8Q09428 1581 aa20.25■□□□□ 0.83
AP002990.1-202ENST00000496634 TOP2AP11388 1531 aaKnown RBP20.25■□□□□ 0.83
AP002990.1-202ENST00000496634 CANXP27824 592 aaKnown RBP20.24■□□□□ 0.83
AP002990.1-202ENST00000496634 PDS5BQ9NTI5 1447 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms