RNA–Protein interactions for RNA: ENST00000535011.6

CALU-205, Transcript of calumenin, humanhuman

TSL 1 (best) BASIC

Gene CALU, Length 3,210 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALU-205ENST00000535011 NISCHQ9Y2I1 1504 aa33.78■■■■□ 3
CALU-205ENST00000535011 SHROOM4Q9ULL8 1493 aa29.78■■■□□ 2.36
CALU-205ENST00000535011 DCAF8L2P0C7V8 631 aa29.3■■■□□ 2.28
CALU-205ENST00000535011 SUPT5HO00267 1087 aaKnown RBP29.1■■■□□ 2.25
CALU-205ENST00000535011 ZCCHC6Q5VYS8 1495 aaKnown RBP28.46■■■□□ 2.15
CALU-205ENST00000535011 CCDC180Q9P1Z9 1646 aa28.35■■■□□ 2.13
CALU-205ENST00000535011 CHIC1Q5VXU3 224 aa27.71■■■□□ 2.03
CALU-205ENST00000535011 MYO15BQ96JP2 1530 aa27.62■■■□□ 2.01
CALU-205ENST00000535011 ABCC9O60706 1549 aa27.4■■□□□ 1.98
CALU-205ENST00000535011 SCRIBQ14160 1630 aa27.35■■□□□ 1.97
CALU-205ENST00000535011 LOC105371045A0A1W2PR82 267 aa27.31■■□□□ 1.96
CALU-205ENST00000535011 EHMT2Q96KQ7 1210 aa27.29■■□□□ 1.96
CALU-205ENST00000535011 PCGF6Q9BYE7 350 aa27.23■■□□□ 1.95
CALU-205ENST00000535011 DCAF1Q9Y4B6 1507 aa27.21■■□□□ 1.95
CALU-205ENST00000535011 FAM9AQ8IZU1 332 aaPredicted RBP27.09■■□□□ 1.93
CALU-205ENST00000535011 PPARGC1BQ86YN6 1023 aaKnown RBP26.89■■□□□ 1.89
CALU-205ENST00000535011 RSF1Q96T23 1441 aaPredicted RBP26.86■■□□□ 1.89
CALU-205ENST00000535011 TRIM41Q8WV44 630 aa26.78■■□□□ 1.88
CALU-205ENST00000535011 CECR2Q9BXF3 1484 aa26.74■■□□□ 1.87
CALU-205ENST00000535011 RB1CC1Q8TDY2 1594 aa26.68■■□□□ 1.86
CALU-205ENST00000535011 HRCP23327 699 aa26.67■■□□□ 1.86
CALU-205ENST00000535011 MROH2BQ7Z745 1585 aa26.49■■□□□ 1.83
CALU-205ENST00000535011 PABPN1Q86U42 306 aaKnown RBP eCLIP26.48■■□□□ 1.83
CALU-205ENST00000535011 NACADO15069 1562 aa26.42■■□□□ 1.82
CALU-205ENST00000535011 WIZO95785 1651 aa26.35■■□□□ 1.81
CALU-205ENST00000535011 TTBK1Q5TCY1 1321 aaPredicted RBP26.28■■□□□ 1.8
CALU-205ENST00000535011 TRIM26Q12899 539 aaPredicted RBP26.15■■□□□ 1.78
CALU-205ENST00000535011 ABCC8Q09428 1581 aa25.93■■□□□ 1.74
CALU-205ENST00000535011 BAZ1AQ9NRL2 1556 aaPredicted RBP25.9■■□□□ 1.74
CALU-205ENST00000535011 RANGAP1P46060 587 aaPredicted RBP25.8■■□□□ 1.72
CALU-205ENST00000535011 CCDC88BA6NC98 1476 aa25.79■■□□□ 1.72
CALU-205ENST00000535011 UNC13AQ9UPW8 1703 aa25.78■■□□□ 1.72
CALU-205ENST00000535011 SMARCA4P51532 1647 aa25.75■■□□□ 1.71
CALU-205ENST00000535011 UBTFP17480 764 aaKnown RBP25.69■■□□□ 1.7
CALU-205ENST00000535011 SOGA1O94964 1423 aa25.66■■□□□ 1.7
CALU-205ENST00000535011 TOP2AP11388 1531 aaKnown RBP25.64■■□□□ 1.7
CALU-205ENST00000535011 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.64■■□□□ 1.69
CALU-205ENST00000535011 SMARCA2P51531 1590 aa25.59■■□□□ 1.69
CALU-205ENST00000535011 RUSC2Q8N2Y8 1516 aa25.58■■□□□ 1.69
CALU-205ENST00000535011 BICRAQ9NZM4 1560 aa25.52■■□□□ 1.68
CALU-205ENST00000535011 EIF4G1Q04637 1599 aaKnown RBP25.49■■□□□ 1.67
CALU-205ENST00000535011 CCER1Q8TC90 406 aaPredicted RBP25.43■■□□□ 1.66
CALU-205ENST00000535011 CSRNP3Q8WYN3 585 aa25.42■■□□□ 1.66
CALU-205ENST00000535011 CEP162Q5TB80 1403 aa25.35■■□□□ 1.65
CALU-205ENST00000535011 WRNQ14191 1432 aaPredicted RBP eCLIP25.3■■□□□ 1.64
CALU-205ENST00000535011 BAZ1BQ9UIG0 1483 aaKnown RBP25.27■■□□□ 1.64
CALU-205ENST00000535011 ZEB1P37275 1124 aaPredicted RBP25.25■■□□□ 1.63
CALU-205ENST00000535011 ATAD2BQ9ULI0 1458 aa25.23■■□□□ 1.63
CALU-205ENST00000535011 HNRNPUL2Q1KMD3 747 aaKnown RBP25.18■■□□□ 1.62
CALU-205ENST00000535011 SYNJ1O43426 1573 aa25.14■■□□□ 1.61
CALU-205ENST00000535011 TNIKQ9UKE5 1360 aa25.08■■□□□ 1.61
CALU-205ENST00000535011 GOLGA3Q08378 1498 aa25.02■■□□□ 1.6
CALU-205ENST00000535011 SCAF1Q9H7N4 1312 aaKnown RBP24.96■■□□□ 1.59
CALU-205ENST00000535011 APLP2Q06481 763 aa24.95■■□□□ 1.59
CALU-205ENST00000535011 RAPGEF2Q9Y4G8 1499 aa24.95■■□□□ 1.59
CALU-205ENST00000535011 YTHDC1Q96MU7 727 aaKnown RBP24.94■■□□□ 1.58
CALU-205ENST00000535011 CLIP1P30622 1438 aa24.92■■□□□ 1.58
CALU-205ENST00000535011 PEG3Q9GZU2 1588 aa24.9■■□□□ 1.58
CALU-205ENST00000535011 EEA1Q15075 1411 aa24.9■■□□□ 1.58
CALU-205ENST00000535011 CEP164Q9UPV0 1460 aa24.84■■□□□ 1.57
CALU-205ENST00000535011 DIEXFQ68CQ4 756 aaKnown RBP24.8■■□□□ 1.56
CALU-205ENST00000535011 ITGAEP38570 1179 aa24.77■■□□□ 1.56
CALU-205ENST00000535011 NEUROD1Q13562 356 aa24.71■■□□□ 1.55
CALU-205ENST00000535011 ATP1B4Q9UN42 357 aaPredicted RBP24.67■■□□□ 1.54
CALU-205ENST00000535011 KANK4Q5T7N3 995 aaPredicted RBP24.65■■□□□ 1.54
CALU-205ENST00000535011 P3H3Q8IVL6 736 aa24.65■■□□□ 1.54
CALU-205ENST00000535011 VPS8Q8N3P4 1428 aa24.62■■□□□ 1.53
CALU-205ENST00000535011 CUX1P39880 1505 aa24.61■■□□□ 1.53
CALU-205ENST00000535011 TOP2BQ02880 1626 aa24.59■■□□□ 1.53
CALU-205ENST00000535011 KIF21BO75037 1637 aa24.58■■□□□ 1.53
CALU-205ENST00000535011 GTF3C3Q9Y5Q9 886 aa24.58■■□□□ 1.53
CALU-205ENST00000535011 NCAPD3P42695 1498 aa24.57■■□□□ 1.52
CALU-205ENST00000535011 ACIN1Q9UKV3 1341 aaKnown RBP24.49■■□□□ 1.51
CALU-205ENST00000535011 KIF27Q86VH2 1401 aa24.48■■□□□ 1.51
CALU-205ENST00000535011 CUX2O14529 1486 aa24.47■■□□□ 1.51
CALU-205ENST00000535011 DNAJC5BQ9UF47 199 aa24.43■■□□□ 1.5
CALU-205ENST00000535011 HMGXB3Q12766 1538 aa24.43■■□□□ 1.5
CALU-205ENST00000535011 ARAP1Q96P48 1450 aa24.42■■□□□ 1.5
CALU-205ENST00000535011 CFTRP13569 1480 aa24.42■■□□□ 1.5
CALU-205ENST00000535011 ZNF316A6NFI3 1004 aaPredicted RBP24.4■■□□□ 1.5
CALU-205ENST00000535011 CENPBP07199 599 aaPredicted RBP24.4■■□□□ 1.5
CALU-205ENST00000535011 PRXQ9BXM0 1461 aa24.39■■□□□ 1.5
CALU-205ENST00000535011 BIVM-ERCC5R4GMW8 1640 aa24.37■■□□□ 1.49
CALU-205ENST00000535011 CADPSQ9ULU8 1353 aa24.33■■□□□ 1.49
CALU-205ENST00000535011 NESP48681 1621 aa24.33■■□□□ 1.48
CALU-205ENST00000535011 MIER1Q8N108 512 aa24.31■■□□□ 1.48
CALU-205ENST00000535011 CC2D2AQ9P2K1 1620 aa24.29■■□□□ 1.48
CALU-205ENST00000535011 FGD5Q6ZNL6 1462 aa24.28■■□□□ 1.48
CALU-205ENST00000535011 FAM50AQ14320 339 aaKnown RBP24.27■■□□□ 1.48
CALU-205ENST00000535011 IGF1RP08069 1367 aa24.27■■□□□ 1.47
CALU-205ENST00000535011 RAD54L2Q9Y4B4 1467 aa24.26■■□□□ 1.47
CALU-205ENST00000535011 CARMIL1Q5VZK9 1371 aa24.24■■□□□ 1.47
CALU-205ENST00000535011 ARHGAP35Q9NRY4 1499 aa24.23■■□□□ 1.47
CALU-205ENST00000535011 ERICH3Q5RHP9 1530 aa24.19■■□□□ 1.46
CALU-205ENST00000535011 ARID3CA6NKF2 412 aa24.18■■□□□ 1.46
CALU-205ENST00000535011 FANCD2Q9BXW9 1451 aa24.17■■□□□ 1.46
CALU-205ENST00000535011 DHX57Q6P158 1386 aaKnown RBP24.09■■□□□ 1.45
CALU-205ENST00000535011 TDRD9Q8NDG6 1382 aaKnown RBP24.09■■□□□ 1.45
CALU-205ENST00000535011 FHOD3Q2V2M9 1422 aa24.09■■□□□ 1.45
CALU-205ENST00000535011 CCNB3Q8WWL7 1395 aa24.07■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms