Protein–RNA interactions for Protein: Q8N7C3

TRIML2, Probable E3 ubiquitin-protein ligase TRIML2, humanhuman

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIML2Q8N7C3 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRIML2Q8N7C3 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC15.87■□□□□ 0.13
TRIML2Q8N7C3 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRIML2Q8N7C3 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRIML2Q8N7C3 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRIML2Q8N7C3 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRIML2Q8N7C3 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRIML2Q8N7C3 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC15.87■□□□□ 0.13
TRIML2Q8N7C3 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
TRIML2Q8N7C3 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC15.87■□□□□ 0.13
TRIML2Q8N7C3 MIR3652-201ENST00000579335 131 ntBASIC15.87■□□□□ 0.13
TRIML2Q8N7C3 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC15.87■□□□□ 0.13
TRIML2Q8N7C3 AF228730.7-201ENST00000641842 219 ntBASIC15.87■□□□□ 0.13
TRIML2Q8N7C3 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TRIML2Q8N7C3 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRIML2Q8N7C3 AC022532.1-201ENST00000624563 1728 ntBASIC15.87■□□□□ 0.13
TRIML2Q8N7C3 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRIML2Q8N7C3 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRIML2Q8N7C3 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRIML2Q8N7C3 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC15.87■□□□□ 0.13
TRIML2Q8N7C3 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRIML2Q8N7C3 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC15.87■□□□□ 0.13
TRIML2Q8N7C3 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TRIML2Q8N7C3 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRIML2Q8N7C3 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC15.87■□□□□ 0.13
TRIML2Q8N7C3 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRIML2Q8N7C3 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRIML2Q8N7C3 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC15.87■□□□□ 0.13
TRIML2Q8N7C3 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC15.87■□□□□ 0.13
TRIML2Q8N7C3 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TRIML2Q8N7C3 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRIML2Q8N7C3 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
TRIML2Q8N7C3 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRIML2Q8N7C3 FAM45BP-202ENST00000592932 1624 ntBASIC15.86■□□□□ 0.13
TRIML2Q8N7C3 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TRIML2Q8N7C3 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
TRIML2Q8N7C3 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
TRIML2Q8N7C3 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TRIML2Q8N7C3 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TRIML2Q8N7C3 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRIML2Q8N7C3 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRIML2Q8N7C3 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC15.86■□□□□ 0.13
TRIML2Q8N7C3 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC15.86■□□□□ 0.13
TRIML2Q8N7C3 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
TRIML2Q8N7C3 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC15.86■□□□□ 0.13
TRIML2Q8N7C3 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRIML2Q8N7C3 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRIML2Q8N7C3 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
TRIML2Q8N7C3 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
TRIML2Q8N7C3 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRIML2Q8N7C3 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
TRIML2Q8N7C3 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC15.86■□□□□ 0.13
TRIML2Q8N7C3 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRIML2Q8N7C3 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC15.86■□□□□ 0.13
TRIML2Q8N7C3 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRIML2Q8N7C3 HLA-DQB2-231ENST00000435145 2026 ntBASIC15.86■□□□□ 0.13
TRIML2Q8N7C3 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRIML2Q8N7C3 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRIML2Q8N7C3 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRIML2Q8N7C3 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TRIML2Q8N7C3 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRIML2Q8N7C3 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TRIML2Q8N7C3 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC15.86■□□□□ 0.13
TRIML2Q8N7C3 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC15.86■□□□□ 0.13
TRIML2Q8N7C3 SCARNA2-201ENST00000458748 420 ntBASIC15.86■□□□□ 0.13
TRIML2Q8N7C3 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC15.86■□□□□ 0.13
TRIML2Q8N7C3 TPM1-218ENST00000559281 851 ntTSL 5 BASIC15.86■□□□□ 0.13
TRIML2Q8N7C3 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC15.86■□□□□ 0.13
TRIML2Q8N7C3 AL732292.2-201ENST00000609649 430 ntBASIC15.86■□□□□ 0.13
TRIML2Q8N7C3 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC15.86■□□□□ 0.13
TRIML2Q8N7C3 AL355877.3-201ENST00000622820 899 ntBASIC15.86■□□□□ 0.13
TRIML2Q8N7C3 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
TRIML2Q8N7C3 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC15.86■□□□□ 0.13
TRIML2Q8N7C3 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRIML2Q8N7C3 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRIML2Q8N7C3 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC15.86■□□□□ 0.13
TRIML2Q8N7C3 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRIML2Q8N7C3 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRIML2Q8N7C3 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TRIML2Q8N7C3 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC15.86■□□□□ 0.13
TRIML2Q8N7C3 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TRIML2Q8N7C3 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC15.86■□□□□ 0.13
TRIML2Q8N7C3 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC15.86■□□□□ 0.13
TRIML2Q8N7C3 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC15.86■□□□□ 0.13
TRIML2Q8N7C3 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC15.86■□□□□ 0.13
TRIML2Q8N7C3 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC15.86■□□□□ 0.13
TRIML2Q8N7C3 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRIML2Q8N7C3 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRIML2Q8N7C3 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
TRIML2Q8N7C3 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRIML2Q8N7C3 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC15.85■□□□□ 0.13
TRIML2Q8N7C3 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC15.85■□□□□ 0.13
TRIML2Q8N7C3 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRIML2Q8N7C3 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRIML2Q8N7C3 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRIML2Q8N7C3 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC15.85■□□□□ 0.13
TRIML2Q8N7C3 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC15.85■□□□□ 0.13
TRIML2Q8N7C3 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC15.85■□□□□ 0.13
TRIML2Q8N7C3 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRIML2Q8N7C3 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC15.85■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms