RNA–Protein interactions for RNA: ENST00000420578.6

CYB561D1-204, Transcript of cytochrome b561 family member D1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CYB561D1, Length 3,326 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561D1-204ENST00000420578 NISCHQ9Y2I1 1504 aa26.89■■□□□ 1.9
CYB561D1-204ENST00000420578 HRCP23327 699 aa25.58■■□□□ 1.69
CYB561D1-204ENST00000420578 PELP1Q8IZL8 1130 aaKnown RBP25.24■■□□□ 1.63
CYB561D1-204ENST00000420578 PPARGC1BQ86YN6 1023 aaKnown RBP25.23■■□□□ 1.63
CYB561D1-204ENST00000420578 PCGF6Q9BYE7 350 aa25.15■■□□□ 1.62
CYB561D1-204ENST00000420578 SUPT5HO00267 1087 aaKnown RBP24.95■■□□□ 1.58
CYB561D1-204ENST00000420578 SHROOM4Q9ULL8 1493 aa24.8■■□□□ 1.56
CYB561D1-204ENST00000420578 SCAF1Q9H7N4 1312 aaKnown RBP24.42■■□□□ 1.5
CYB561D1-204ENST00000420578 MYO15BQ96JP2 1530 aa24.34■■□□□ 1.49
CYB561D1-204ENST00000420578 MYT1Q01538 1121 aa24.34■■□□□ 1.49
CYB561D1-204ENST00000420578 CHIC1Q5VXU3 224 aa24.32■■□□□ 1.48
CYB561D1-204ENST00000420578 TRIM26Q12899 539 aaPredicted RBP24.05■■□□□ 1.44
CYB561D1-204ENST00000420578 LOC105371045A0A1W2PR82 267 aa24■■□□□ 1.43
CYB561D1-204ENST00000420578 ZEB1P37275 1124 aaPredicted RBP23.98■■□□□ 1.43
CYB561D1-204ENST00000420578 DCAF1Q9Y4B6 1507 aa23.85■■□□□ 1.41
CYB561D1-204ENST00000420578 ACIN1Q9UKV3 1341 aaKnown RBP23.76■■□□□ 1.39
CYB561D1-204ENST00000420578 NEUROD1Q13562 356 aa23.71■■□□□ 1.39
CYB561D1-204ENST00000420578 GTF3C3Q9Y5Q9 886 aa23.71■■□□□ 1.39
CYB561D1-204ENST00000420578 CENPBP07199 599 aaPredicted RBP23.58■■□□□ 1.37
CYB561D1-204ENST00000420578 CCDC180Q9P1Z9 1646 aa23.52■■□□□ 1.36
CYB561D1-204ENST00000420578 DCAF8L2P0C7V8 631 aa23.36■■□□□ 1.33
CYB561D1-204ENST00000420578 EHMT2Q96KQ7 1210 aa23.29■■□□□ 1.32
CYB561D1-204ENST00000420578 DIEXFQ68CQ4 756 aaKnown RBP23.27■■□□□ 1.32
CYB561D1-204ENST00000420578 CCER1Q8TC90 406 aaPredicted RBP23.22■■□□□ 1.31
CYB561D1-204ENST00000420578 YTHDC1Q96MU7 727 aaKnown RBP23.2■■□□□ 1.3
CYB561D1-204ENST00000420578 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.18■■□□□ 1.3
CYB561D1-204ENST00000420578 FAM9AQ8IZU1 332 aaPredicted RBP23.18■■□□□ 1.3
CYB561D1-204ENST00000420578 ABCC9O60706 1549 aa22.91■■□□□ 1.26
CYB561D1-204ENST00000420578 TRIM41Q8WV44 630 aa22.9■■□□□ 1.26
CYB561D1-204ENST00000420578 ZCCHC6Q5VYS8 1495 aaKnown RBP22.86■■□□□ 1.25
CYB561D1-204ENST00000420578 BCL11AQ9H165 835 aa22.82■■□□□ 1.24
CYB561D1-204ENST00000420578 TTBK1Q5TCY1 1321 aaPredicted RBP22.79■■□□□ 1.24
CYB561D1-204ENST00000420578 ZNF316A6NFI3 1004 aaPredicted RBP22.67■■□□□ 1.22
CYB561D1-204ENST00000420578 MIER1Q8N108 512 aa22.6■■□□□ 1.21
CYB561D1-204ENST00000420578 ANP32EQ9BTT0 268 aa22.59■■□□□ 1.21
CYB561D1-204ENST00000420578 CSRNP3Q8WYN3 585 aa22.41■■□□□ 1.18
CYB561D1-204ENST00000420578 SUPT16HQ9Y5B9 1047 aaKnown RBP22.35■■□□□ 1.17
CYB561D1-204ENST00000420578 TSHZ2Q9NRE2 1034 aa22.34■■□□□ 1.17
CYB561D1-204ENST00000420578 BCANQ96GW7 911 aa22.18■■□□□ 1.14
CYB561D1-204ENST00000420578 CLSPNQ9HAW4 1339 aa22.14■■□□□ 1.13
CYB561D1-204ENST00000420578 HNRNPUL2Q1KMD3 747 aaKnown RBP22.11■■□□□ 1.13
CYB561D1-204ENST00000420578 PRKCSHP14314 528 aaPredicted RBP22.04■■□□□ 1.12
CYB561D1-204ENST00000420578 RSF1Q96T23 1441 aaPredicted RBP21.92■■□□□ 1.1
CYB561D1-204ENST00000420578 ERICH6Q7L0X2 663 aa21.88■■□□□ 1.09
CYB561D1-204ENST00000420578 FKBP8Q14318 412 aa21.88■■□□□ 1.09
CYB561D1-204ENST00000420578 RBM19Q9Y4C8 960 aaKnown RBP21.84■■□□□ 1.09
CYB561D1-204ENST00000420578 UBTFP17480 764 aaKnown RBP21.83■■□□□ 1.09
CYB561D1-204ENST00000420578 RB1CC1Q8TDY2 1594 aa21.83■■□□□ 1.08
CYB561D1-204ENST00000420578 PABPN1Q86U42 306 aaKnown RBP eCLIP21.82■■□□□ 1.08
CYB561D1-204ENST00000420578 NEFLP07196 543 aa21.8■■□□□ 1.08
CYB561D1-204ENST00000420578 ITGAEP38570 1179 aa21.75■■□□□ 1.07
CYB561D1-204ENST00000420578 CEP162Q5TB80 1403 aa21.71■■□□□ 1.07
CYB561D1-204ENST00000420578 WRNQ14191 1432 aaPredicted RBP eCLIP21.66■■□□□ 1.06
CYB561D1-204ENST00000420578 KCNH8Q96L42 1107 aa21.65■■□□□ 1.06
CYB561D1-204ENST00000420578 APLP2Q06481 763 aa21.62■■□□□ 1.05
CYB561D1-204ENST00000420578 MSH5O43196 834 aa21.58■■□□□ 1.04
CYB561D1-204ENST00000420578 RANGAP1P46060 587 aaPredicted RBP21.52■■□□□ 1.03
CYB561D1-204ENST00000420578 DEKP35659 375 aaKnown RBP21.47■■□□□ 1.03
CYB561D1-204ENST00000420578 TNIKQ9UKE5 1360 aa21.46■■□□□ 1.03
CYB561D1-204ENST00000420578 SCRIBQ14160 1630 aa21.45■■□□□ 1.02
CYB561D1-204ENST00000420578 TRIM52Q96A61 297 aa21.45■■□□□ 1.02
CYB561D1-204ENST00000420578 NACADO15069 1562 aa21.43■■□□□ 1.02
CYB561D1-204ENST00000420578 ANO8Q9HCE9 1232 aaPredicted RBP21.43■■□□□ 1.02
CYB561D1-204ENST00000420578 CDK11AQ9UQ88 783 aaPredicted RBP21.42■■□□□ 1.02
CYB561D1-204ENST00000420578 DDX10Q13206 875 aaKnown RBP21.37■■□□□ 1.01
CYB561D1-204ENST00000420578 MYT1LQ9UL68 1186 aa21.35■■□□□ 1.01
CYB561D1-204ENST00000420578 NBR1Q14596 966 aa21.32■■□□□ 1
CYB561D1-204ENST00000420578 IRX6P78412 446 aaPredicted RBP21.32■■□□□ 1
CYB561D1-204ENST00000420578 SOGA1O94964 1423 aa21.32■■□□□ 1
CYB561D1-204ENST00000420578 FANCIQ9NVI1 1328 aa21.3■■□□□ 1
CYB561D1-204ENST00000420578 CCDC88BA6NC98 1476 aa21.29■■□□□ 1
CYB561D1-204ENST00000420578 DHX57Q6P158 1386 aaKnown RBP21.25■□□□□ 0.99
CYB561D1-204ENST00000420578 ABCC8Q09428 1581 aa21.23■□□□□ 0.99
CYB561D1-204ENST00000420578 CECR2Q9BXF3 1484 aa21.22■□□□□ 0.99
CYB561D1-204ENST00000420578 CCDC136Q96JN2 1154 aa21.21■□□□□ 0.99
CYB561D1-204ENST00000420578 SALL2Q9Y467 1007 aaPredicted RBP21.19■□□□□ 0.98
CYB561D1-204ENST00000420578 ANP32CO43423 234 aa21.16■□□□□ 0.98
CYB561D1-204ENST00000420578 HIRIP3Q9BW71 556 aaPredicted RBP21.15■□□□□ 0.98
CYB561D1-204ENST00000420578 RTN4Q9NQC3 1192 aaKnown RBP21.14■□□□□ 0.97
CYB561D1-204ENST00000420578 GOLGA3Q08378 1498 aa21.13■□□□□ 0.97
CYB561D1-204ENST00000420578 RUSC2Q8N2Y8 1516 aa21.13■□□□□ 0.97
CYB561D1-204ENST00000420578 MROH2BQ7Z745 1585 aa21.13■□□□□ 0.97
CYB561D1-204ENST00000420578 CLIP1P30622 1438 aa21.12■□□□□ 0.97
CYB561D1-204ENST00000420578 RTL5Q5HYW3 569 aaPredicted RBP21.11■□□□□ 0.97
CYB561D1-204ENST00000420578 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.06■□□□□ 0.96
CYB561D1-204ENST00000420578 HNRNPUQ00839 825 aaKnown RBP eCLIP21.05■□□□□ 0.96
CYB561D1-204ENST00000420578 NOP58Q9Y2X3 529 aaKnown RBP21.05■□□□□ 0.96
CYB561D1-204ENST00000420578 WIZO95785 1651 aa21.04■□□□□ 0.96
CYB561D1-204ENST00000420578 EEA1Q15075 1411 aa21.03■□□□□ 0.96
CYB561D1-204ENST00000420578 VPS8Q8N3P4 1428 aa21.01■□□□□ 0.95
CYB561D1-204ENST00000420578 ERICH6BQ5W0A0 696 aa20.98■□□□□ 0.95
CYB561D1-204ENST00000420578 IL27Q8NEV9 243 aa20.97■□□□□ 0.95
CYB561D1-204ENST00000420578 CCER2I3L3R5 266 aa20.96■□□□□ 0.95
CYB561D1-204ENST00000420578 PAK3O75914 559 aaPredicted RBP20.95■□□□□ 0.94
CYB561D1-204ENST00000420578 UNC13AQ9UPW8 1703 aa20.95■□□□□ 0.94
CYB561D1-204ENST00000420578 B4GALNT3Q6L9W6 998 aa20.94■□□□□ 0.94
CYB561D1-204ENST00000420578 DNAJC5BQ9UF47 199 aa20.92■□□□□ 0.94
CYB561D1-204ENST00000420578 PPP4R2Q9NY27 417 aa20.92■□□□□ 0.94
CYB561D1-204ENST00000420578 SIN3AQ96ST3 1273 aa20.9■□□□□ 0.94
CYB561D1-204ENST00000420578 PPP1R15AO75807 674 aaPredicted RBP20.89■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms