RNA–Protein interactions for RNA: ENST00000405646.5

MTA1-202, Transcript of metastasis associated 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MTA1, Length 2,709 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTA1-202ENST00000405646 NISCHQ9Y2I1 1504 aa27.46■■□□□ 1.99
MTA1-202ENST00000405646 PELP1Q8IZL8 1130 aaKnown RBP26.91■■□□□ 1.9
MTA1-202ENST00000405646 MYT1Q01538 1121 aa26.6■■□□□ 1.85
MTA1-202ENST00000405646 TTBK1Q5TCY1 1321 aaPredicted RBP25.7■■□□□ 1.7
MTA1-202ENST00000405646 HRCP23327 699 aa25.38■■□□□ 1.65
MTA1-202ENST00000405646 PRKCSHP14314 528 aaPredicted RBP24.81■■□□□ 1.56
MTA1-202ENST00000405646 PPARGC1BQ86YN6 1023 aaKnown RBP24.54■■□□□ 1.52
MTA1-202ENST00000405646 ERICH6Q7L0X2 663 aa24.49■■□□□ 1.51
MTA1-202ENST00000405646 APLP2Q06481 763 aa24.42■■□□□ 1.5
MTA1-202ENST00000405646 CCDC180Q9P1Z9 1646 aa24.39■■□□□ 1.5
MTA1-202ENST00000405646 SLC24A1O60721 1099 aa24.38■■□□□ 1.49
MTA1-202ENST00000405646 PCGF6Q9BYE7 350 aa24.27■■□□□ 1.48
MTA1-202ENST00000405646 MYO15BQ96JP2 1530 aa24.16■■□□□ 1.46
MTA1-202ENST00000405646 DCAF1Q9Y4B6 1507 aa24.14■■□□□ 1.45
MTA1-202ENST00000405646 SCAF1Q9H7N4 1312 aaKnown RBP24.14■■□□□ 1.45
MTA1-202ENST00000405646 BCL11AQ9H165 835 aa24.13■■□□□ 1.45
MTA1-202ENST00000405646 CHIC1Q5VXU3 224 aa23.92■■□□□ 1.42
MTA1-202ENST00000405646 SUPT5HO00267 1087 aaKnown RBP23.91■■□□□ 1.42
MTA1-202ENST00000405646 ZEB1P37275 1124 aaPredicted RBP23.9■■□□□ 1.42
MTA1-202ENST00000405646 SHROOM4Q9ULL8 1493 aa23.88■■□□□ 1.41
MTA1-202ENST00000405646 FAM9AQ8IZU1 332 aaPredicted RBP23.78■■□□□ 1.4
MTA1-202ENST00000405646 TRIM26Q12899 539 aaPredicted RBP23.67■■□□□ 1.38
MTA1-202ENST00000405646 ABCC9O60706 1549 aa23.62■■□□□ 1.37
MTA1-202ENST00000405646 ACIN1Q9UKV3 1341 aaKnown RBP23.52■■□□□ 1.36
MTA1-202ENST00000405646 ZCCHC6Q5VYS8 1495 aaKnown RBP23.48■■□□□ 1.35
MTA1-202ENST00000405646 DAXXQ9UER7 740 aaPredicted RBP23.44■■□□□ 1.34
MTA1-202ENST00000405646 CENPBP07199 599 aaPredicted RBP23.43■■□□□ 1.34
MTA1-202ENST00000405646 NEUROD1Q13562 356 aa23.24■■□□□ 1.31
MTA1-202ENST00000405646 LOC105371045A0A1W2PR82 267 aa23.23■■□□□ 1.31
MTA1-202ENST00000405646 GTF3C3Q9Y5Q9 886 aa23.17■■□□□ 1.3
MTA1-202ENST00000405646 RB1CC1Q8TDY2 1594 aa23.01■■□□□ 1.27
MTA1-202ENST00000405646 NACADO15069 1562 aa22.92■■□□□ 1.26
MTA1-202ENST00000405646 EIF5BO60841 1220 aaKnown RBP22.92■■□□□ 1.26
MTA1-202ENST00000405646 ANP32EQ9BTT0 268 aa22.91■■□□□ 1.26
MTA1-202ENST00000405646 DIEXFQ68CQ4 756 aaKnown RBP22.73■■□□□ 1.23
MTA1-202ENST00000405646 CSRNP3Q8WYN3 585 aa22.55■■□□□ 1.2
MTA1-202ENST00000405646 CLSPNQ9HAW4 1339 aa22.55■■□□□ 1.2
MTA1-202ENST00000405646 UBE2Q2Q8WVN8 375 aa22.54■■□□□ 1.2
MTA1-202ENST00000405646 DCAF8L2P0C7V8 631 aa22.52■■□□□ 1.2
MTA1-202ENST00000405646 TRIM41Q8WV44 630 aa22.5■■□□□ 1.19
MTA1-202ENST00000405646 CCER1Q8TC90 406 aaPredicted RBP22.37■■□□□ 1.17
MTA1-202ENST00000405646 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.37■■□□□ 1.17
MTA1-202ENST00000405646 UNC13AQ9UPW8 1703 aa22.3■■□□□ 1.16
MTA1-202ENST00000405646 ANO8Q9HCE9 1232 aaPredicted RBP22.28■■□□□ 1.16
MTA1-202ENST00000405646 ZNF316A6NFI3 1004 aaPredicted RBP22.27■■□□□ 1.16
MTA1-202ENST00000405646 PLEKHG5O94827 1062 aa22.25■■□□□ 1.15
MTA1-202ENST00000405646 YTHDC1Q96MU7 727 aaKnown RBP22.18■■□□□ 1.14
MTA1-202ENST00000405646 BICRAQ9NZM4 1560 aa22.13■■□□□ 1.13
MTA1-202ENST00000405646 TSHZ2Q9NRE2 1034 aa22.11■■□□□ 1.13
MTA1-202ENST00000405646 RSF1Q96T23 1441 aaPredicted RBP22.1■■□□□ 1.13
MTA1-202ENST00000405646 SUPT16HQ9Y5B9 1047 aaKnown RBP22.05■■□□□ 1.12
MTA1-202ENST00000405646 PODXL2Q9NZ53 605 aa22.05■■□□□ 1.12
MTA1-202ENST00000405646 WRNQ14191 1432 aaPredicted RBP eCLIP22.02■■□□□ 1.129e-6■■■■■ 50.1
MTA1-202ENST00000405646 PABPN1Q86U42 306 aaKnown RBP eCLIP22.02■■□□□ 1.126e-7■■□□□ 13.9
MTA1-202ENST00000405646 MIER1Q8N108 512 aa22■■□□□ 1.11
MTA1-202ENST00000405646 DNAJC5BQ9UF47 199 aa22■■□□□ 1.11
MTA1-202ENST00000405646 EHMT2Q96KQ7 1210 aa21.99■■□□□ 1.11
MTA1-202ENST00000405646 PKNOX2Q96KN3 472 aa21.95■■□□□ 1.1
MTA1-202ENST00000405646 SCRIBQ14160 1630 aa21.89■■□□□ 1.1
MTA1-202ENST00000405646 ERICH6BQ5W0A0 696 aa21.84■■□□□ 1.09
MTA1-202ENST00000405646 SALL2Q9Y467 1007 aaPredicted RBP21.76■■□□□ 1.07
MTA1-202ENST00000405646 MYT1LQ9UL68 1186 aa21.71■■□□□ 1.07
MTA1-202ENST00000405646 EIF4G1Q04637 1599 aaKnown RBP21.64■■□□□ 1.05
MTA1-202ENST00000405646 CEP162Q5TB80 1403 aa21.61■■□□□ 1.05
MTA1-202ENST00000405646 CC2D2AQ9P2K1 1620 aa21.61■■□□□ 1.05
MTA1-202ENST00000405646 NCBP3Q53F19 620 aaKnown RBP21.57■■□□□ 1.04
MTA1-202ENST00000405646 CCDC136Q96JN2 1154 aa21.57■■□□□ 1.04
MTA1-202ENST00000405646 TNIKQ9UKE5 1360 aa21.55■■□□□ 1.04
MTA1-202ENST00000405646 RBM19Q9Y4C8 960 aaKnown RBP21.51■■□□□ 1.03
MTA1-202ENST00000405646 CECR2Q9BXF3 1484 aa21.47■■□□□ 1.03
MTA1-202ENST00000405646 NEFLP07196 543 aa21.46■■□□□ 1.03
MTA1-202ENST00000405646 FANCIQ9NVI1 1328 aa21.42■■□□□ 1.02
MTA1-202ENST00000405646 EEA1Q15075 1411 aa21.41■■□□□ 1.02
MTA1-202ENST00000405646 BAZ1AQ9NRL2 1556 aaPredicted RBP21.37■■□□□ 1.01
MTA1-202ENST00000405646 MROH2BQ7Z745 1585 aa21.34■■□□□ 1.01
MTA1-202ENST00000405646 RANGAP1P46060 587 aaPredicted RBP21.34■■□□□ 1.01
MTA1-202ENST00000405646 ARXQ96QS3 562 aa21.32■■□□□ 1
MTA1-202ENST00000405646 MSH5O43196 834 aa21.32■■□□□ 1
MTA1-202ENST00000405646 DEKP35659 375 aaKnown RBP21.31■■□□□ 1
MTA1-202ENST00000405646 CUX2O14529 1486 aa21.31■■□□□ 1
MTA1-202ENST00000405646 WIZO95785 1651 aa21.3■■□□□ 1
MTA1-202ENST00000405646 PDIA4P13667 645 aaKnown RBP21.26■□□□□ 0.99
MTA1-202ENST00000405646 CCDC88BA6NC98 1476 aa21.25■□□□□ 0.99
MTA1-202ENST00000405646 BCANQ96GW7 911 aa21.24■□□□□ 0.99
MTA1-202ENST00000405646 GOLGA3Q08378 1498 aa21.24■□□□□ 0.99
MTA1-202ENST00000405646 PDE4CQ08493 712 aa21.24■□□□□ 0.99
MTA1-202ENST00000405646 FKBP8Q14318 412 aa21.22■□□□□ 0.99
MTA1-202ENST00000405646 ABCC8Q09428 1581 aa21.21■□□□□ 0.99
MTA1-202ENST00000405646 KLHL34Q8N239 644 aa21.21■□□□□ 0.99
MTA1-202ENST00000405646 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.17■□□□□ 0.98
MTA1-202ENST00000405646 HNRNPUL2Q1KMD3 747 aaKnown RBP21.16■□□□□ 0.98
MTA1-202ENST00000405646 SOGA1O94964 1423 aa21.15■□□□□ 0.98
MTA1-202ENST00000405646 DHX57Q6P158 1386 aaKnown RBP21.12■□□□□ 0.97
MTA1-202ENST00000405646 DNAJC5Q9H3Z4 198 aa21.09■□□□□ 0.97
MTA1-202ENST00000405646 FGD1P98174 961 aa21.08■□□□□ 0.97
MTA1-202ENST00000405646 VPS8Q8N3P4 1428 aa21.08■□□□□ 0.97
MTA1-202ENST00000405646 KIF21BO75037 1637 aa21.08■□□□□ 0.96
MTA1-202ENST00000405646 KCNH8Q96L42 1107 aa21.07■□□□□ 0.96
MTA1-202ENST00000405646 TOP2AP11388 1531 aaKnown RBP21.05■□□□□ 0.96
MTA1-202ENST00000405646 GLIPR1L2Q4G1C9 344 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms