RNA–Protein interactions for RNA: ENST00000371486.3

CPT2-201, Transcript of carnitine palmitoyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPT2, Length 3,094 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPT2-201ENST00000371486 NISCHQ9Y2I1 1504 aa33.79■■■■□ 3
CPT2-201ENST00000371486 CCDC180Q9P1Z9 1646 aa29■■■□□ 2.23
CPT2-201ENST00000371486 ZCCHC6Q5VYS8 1495 aaKnown RBP28.43■■■□□ 2.14
CPT2-201ENST00000371486 SHROOM4Q9ULL8 1493 aa28.42■■■□□ 2.14
CPT2-201ENST00000371486 DCAF8L2P0C7V8 631 aa28.38■■■□□ 2.13
CPT2-201ENST00000371486 DCAF1Q9Y4B6 1507 aa27.66■■■□□ 2.02
CPT2-201ENST00000371486 ABCC9O60706 1549 aa27.6■■■□□ 2.01
CPT2-201ENST00000371486 SUPT5HO00267 1087 aaKnown RBP27.53■■■□□ 2
CPT2-201ENST00000371486 SCRIBQ14160 1630 aa27.16■■□□□ 1.94
CPT2-201ENST00000371486 MYO15BQ96JP2 1530 aa27.1■■□□□ 1.93
CPT2-201ENST00000371486 NACADO15069 1562 aa27■■□□□ 1.91
CPT2-201ENST00000371486 RB1CC1Q8TDY2 1594 aa26.74■■□□□ 1.87
CPT2-201ENST00000371486 RSF1Q96T23 1441 aaPredicted RBP26.48■■□□□ 1.83
CPT2-201ENST00000371486 CECR2Q9BXF3 1484 aa26.46■■□□□ 1.83
CPT2-201ENST00000371486 CHIC1Q5VXU3 224 aa26.36■■□□□ 1.81
CPT2-201ENST00000371486 UNC13AQ9UPW8 1703 aa26.34■■□□□ 1.81
CPT2-201ENST00000371486 PABPN1Q86U42 306 aaKnown RBP eCLIP26.29■■□□□ 1.8
CPT2-201ENST00000371486 MROH2BQ7Z745 1585 aa26.27■■□□□ 1.8
CPT2-201ENST00000371486 WIZO95785 1651 aa26.1■■□□□ 1.77
CPT2-201ENST00000371486 BICRAQ9NZM4 1560 aa26.05■■□□□ 1.76
CPT2-201ENST00000371486 BAZ1AQ9NRL2 1556 aaPredicted RBP25.99■■□□□ 1.75
CPT2-201ENST00000371486 SMARCA4P51532 1647 aa25.88■■□□□ 1.73
CPT2-201ENST00000371486 PCGF6Q9BYE7 350 aa25.78■■□□□ 1.72
CPT2-201ENST00000371486 PPARGC1BQ86YN6 1023 aaKnown RBP25.66■■□□□ 1.7
CPT2-201ENST00000371486 HRCP23327 699 aa25.65■■□□□ 1.7
CPT2-201ENST00000371486 TRIM41Q8WV44 630 aa25.65■■□□□ 1.7
CPT2-201ENST00000371486 TOP2AP11388 1531 aaKnown RBP25.62■■□□□ 1.69
CPT2-201ENST00000371486 LOC105371045A0A1W2PR82 267 aa25.62■■□□□ 1.69
CPT2-201ENST00000371486 CCDC88BA6NC98 1476 aa25.54■■□□□ 1.68
CPT2-201ENST00000371486 FAM9AQ8IZU1 332 aaPredicted RBP25.5■■□□□ 1.67
CPT2-201ENST00000371486 SMARCA2P51531 1590 aa25.48■■□□□ 1.67
CPT2-201ENST00000371486 PELP1Q8IZL8 1130 aaKnown RBP25.42■■□□□ 1.66
CPT2-201ENST00000371486 ATAD2BQ9ULI0 1458 aa25.4■■□□□ 1.66
CPT2-201ENST00000371486 PEG3Q9GZU2 1588 aa25.37■■□□□ 1.65
CPT2-201ENST00000371486 EIF4G1Q04637 1599 aaKnown RBP25.36■■□□□ 1.65
CPT2-201ENST00000371486 EHMT2Q96KQ7 1210 aa25.35■■□□□ 1.65
CPT2-201ENST00000371486 BAZ1BQ9UIG0 1483 aaKnown RBP25.3■■□□□ 1.64
CPT2-201ENST00000371486 ABCC8Q09428 1581 aa25.28■■□□□ 1.64
CPT2-201ENST00000371486 NCAPD3P42695 1498 aa25■■□□□ 1.59
CPT2-201ENST00000371486 HMGXB3Q12766 1538 aa24.92■■□□□ 1.58
CPT2-201ENST00000371486 WRNQ14191 1432 aaPredicted RBP eCLIP24.9■■□□□ 1.58
CPT2-201ENST00000371486 SOGA1O94964 1423 aa24.9■■□□□ 1.58
CPT2-201ENST00000371486 MYT1Q01538 1121 aa24.89■■□□□ 1.58
CPT2-201ENST00000371486 RUSC2Q8N2Y8 1516 aa24.83■■□□□ 1.57
CPT2-201ENST00000371486 SYNJ1O43426 1573 aa24.81■■□□□ 1.56
CPT2-201ENST00000371486 CC2D2AQ9P2K1 1620 aa24.81■■□□□ 1.56
CPT2-201ENST00000371486 CSRNP3Q8WYN3 585 aa24.67■■□□□ 1.54
CPT2-201ENST00000371486 TRIM26Q12899 539 aaPredicted RBP24.67■■□□□ 1.54
CPT2-201ENST00000371486 CFTRP13569 1480 aa24.62■■□□□ 1.53
CPT2-201ENST00000371486 UBTFP17480 764 aaKnown RBP24.56■■□□□ 1.52
CPT2-201ENST00000371486 EEA1Q15075 1411 aa24.54■■□□□ 1.52
CPT2-201ENST00000371486 TOP2BQ02880 1626 aa24.53■■□□□ 1.52
CPT2-201ENST00000371486 DNAJC5BQ9UF47 199 aa24.5■■□□□ 1.51
CPT2-201ENST00000371486 CADPSQ9ULU8 1353 aa24.5■■□□□ 1.51
CPT2-201ENST00000371486 CUX1P39880 1505 aa24.49■■□□□ 1.51
CPT2-201ENST00000371486 BIVM-ERCC5R4GMW8 1640 aa24.44■■□□□ 1.5
CPT2-201ENST00000371486 CEP162Q5TB80 1403 aa24.41■■□□□ 1.5
CPT2-201ENST00000371486 TNIKQ9UKE5 1360 aa24.4■■□□□ 1.5
CPT2-201ENST00000371486 GOLGA3Q08378 1498 aa24.39■■□□□ 1.49
CPT2-201ENST00000371486 SCAF1Q9H7N4 1312 aaKnown RBP24.38■■□□□ 1.49
CPT2-201ENST00000371486 NESP48681 1621 aa24.38■■□□□ 1.49
CPT2-201ENST00000371486 RANGAP1P46060 587 aaPredicted RBP24.36■■□□□ 1.49
CPT2-201ENST00000371486 PRDM2Q13029 1718 aa24.33■■□□□ 1.48
CPT2-201ENST00000371486 TTBK1Q5TCY1 1321 aaPredicted RBP24.33■■□□□ 1.48
CPT2-201ENST00000371486 CEP164Q9UPV0 1460 aa24.32■■□□□ 1.48
CPT2-201ENST00000371486 RAPGEF2Q9Y4G8 1499 aa24.31■■□□□ 1.48
CPT2-201ENST00000371486 FANCD2Q9BXW9 1451 aa24.27■■□□□ 1.48
CPT2-201ENST00000371486 KIF21BO75037 1637 aa24.26■■□□□ 1.47
CPT2-201ENST00000371486 KIF27Q86VH2 1401 aa24.18■■□□□ 1.46
CPT2-201ENST00000371486 FGD5Q6ZNL6 1462 aa24.17■■□□□ 1.46
CPT2-201ENST00000371486 CUX2O14529 1486 aa24.14■■□□□ 1.46
CPT2-201ENST00000371486 CLIP1P30622 1438 aa24.11■■□□□ 1.45
CPT2-201ENST00000371486 PRXQ9BXM0 1461 aa24.1■■□□□ 1.45
CPT2-201ENST00000371486 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.1■■□□□ 1.45
CPT2-201ENST00000371486 ZEB1P37275 1124 aaPredicted RBP24.08■■□□□ 1.45
CPT2-201ENST00000371486 RAD54L2Q9Y4B4 1467 aa24.05■■□□□ 1.44
CPT2-201ENST00000371486 LAMC3Q9Y6N6 1575 aa24.04■■□□□ 1.44
CPT2-201ENST00000371486 TOPBP1Q92547 1522 aa24.03■■□□□ 1.44
CPT2-201ENST00000371486 IGF1RP08069 1367 aa24.01■■□□□ 1.43
CPT2-201ENST00000371486 DNMBPQ6XZF7 1577 aa24■■□□□ 1.43
CPT2-201ENST00000371486 ERICH3Q5RHP9 1530 aa23.99■■□□□ 1.43
CPT2-201ENST00000371486 POLA1P09884 1462 aaPredicted RBP23.98■■□□□ 1.43
CPT2-201ENST00000371486 URB2Q14146 1524 aaKnown RBP23.96■■□□□ 1.43
CPT2-201ENST00000371486 PDS5BQ9NTI5 1447 aa23.94■■□□□ 1.42
CPT2-201ENST00000371486 CCER1Q8TC90 406 aaPredicted RBP23.92■■□□□ 1.42
CPT2-201ENST00000371486 KIF21AQ7Z4S6 1674 aa23.91■■□□□ 1.42
CPT2-201ENST00000371486 CARMIL1Q5VZK9 1371 aa23.9■■□□□ 1.42
CPT2-201ENST00000371486 VPS8Q8N3P4 1428 aa23.89■■□□□ 1.41
CPT2-201ENST00000371486 ABCA10Q8WWZ4 1543 aa23.83■■□□□ 1.41
CPT2-201ENST00000371486 TDRD9Q8NDG6 1382 aaKnown RBP23.83■■□□□ 1.4
CPT2-201ENST00000371486 NEUROD1Q13562 356 aa23.82■■□□□ 1.4
CPT2-201ENST00000371486 APLP2Q06481 763 aa23.81■■□□□ 1.4
CPT2-201ENST00000371486 ARAP1Q96P48 1450 aa23.8■■□□□ 1.4
CPT2-201ENST00000371486 GTF3C3Q9Y5Q9 886 aa23.76■■□□□ 1.39
CPT2-201ENST00000371486 ACIN1Q9UKV3 1341 aaKnown RBP23.74■■□□□ 1.39
CPT2-201ENST00000371486 ARHGAP35Q9NRY4 1499 aa23.73■■□□□ 1.39
CPT2-201ENST00000371486 P3H3Q8IVL6 736 aa23.71■■□□□ 1.39
CPT2-201ENST00000371486 WDR97A6NE52 1622 aa23.66■■□□□ 1.38
CPT2-201ENST00000371486 KANK4Q5T7N3 995 aaPredicted RBP23.65■■□□□ 1.38
CPT2-201ENST00000371486 GAPVD1Q14C86 1478 aa23.64■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 221.4 ms