RNA–Protein interactions for RNA: ENST00000395997.3

SALL4-203, Transcript of spalt like transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene SALL4, Length 1,918 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SALL4-203ENST00000395997 NISCHQ9Y2I1 1504 aa34.37■■■■□ 3.09
SALL4-203ENST00000395997 CCDC180Q9P1Z9 1646 aa29.44■■■□□ 2.3
SALL4-203ENST00000395997 ZCCHC6Q5VYS8 1495 aaKnown RBP29.06■■■□□ 2.24
SALL4-203ENST00000395997 SHROOM4Q9ULL8 1493 aa28.8■■■□□ 2.2
SALL4-203ENST00000395997 DCAF1Q9Y4B6 1507 aa28.35■■■□□ 2.13
SALL4-203ENST00000395997 SUPT5HO00267 1087 aaKnown RBP28.15■■■□□ 2.1
SALL4-203ENST00000395997 DCAF8L2P0C7V8 631 aa28.1■■■□□ 2.09
SALL4-203ENST00000395997 MYO15BQ96JP2 1530 aa27.63■■■□□ 2.01
SALL4-203ENST00000395997 CHIC1Q5VXU3 224 aa27.47■■□□□ 1.99
SALL4-203ENST00000395997 ABCC9O60706 1549 aa27.38■■□□□ 1.97
SALL4-203ENST00000395997 SCRIBQ14160 1630 aa27.31■■□□□ 1.96
SALL4-203ENST00000395997 NACADO15069 1562 aa27.19■■□□□ 1.94
SALL4-203ENST00000395997 RSF1Q96T23 1441 aaPredicted RBP27.07■■□□□ 1.92
SALL4-203ENST00000395997 RB1CC1Q8TDY2 1594 aa26.8■■□□□ 1.88
SALL4-203ENST00000395997 CECR2Q9BXF3 1484 aa26.73■■□□□ 1.87
SALL4-203ENST00000395997 MROH2BQ7Z745 1585 aa26.65■■□□□ 1.86
SALL4-203ENST00000395997 LOC105371045A0A1W2PR82 267 aa26.53■■□□□ 1.84
SALL4-203ENST00000395997 WIZO95785 1651 aa26.51■■□□□ 1.83
SALL4-203ENST00000395997 UNC13AQ9UPW8 1703 aa26.43■■□□□ 1.82
SALL4-203ENST00000395997 BAZ1AQ9NRL2 1556 aaPredicted RBP26.41■■□□□ 1.82
SALL4-203ENST00000395997 TRIM41Q8WV44 630 aa26.33■■□□□ 1.81
SALL4-203ENST00000395997 HRCP23327 699 aa26.27■■□□□ 1.8
SALL4-203ENST00000395997 PCGF6Q9BYE7 350 aa26.26■■□□□ 1.79
SALL4-203ENST00000395997 SMARCA4P51532 1647 aa26.22■■□□□ 1.79
SALL4-203ENST00000395997 EIF4G1Q04637 1599 aaKnown RBP26.21■■□□□ 1.79
SALL4-203ENST00000395997 TOP2AP11388 1531 aaKnown RBP26.14■■□□□ 1.78
SALL4-203ENST00000395997 BICRAQ9NZM4 1560 aa26.06■■□□□ 1.76
SALL4-203ENST00000395997 SMARCA2P51531 1590 aa25.99■■□□□ 1.75
SALL4-203ENST00000395997 FAM9AQ8IZU1 332 aaPredicted RBP25.96■■□□□ 1.75
SALL4-203ENST00000395997 CCDC88BA6NC98 1476 aa25.96■■□□□ 1.75
SALL4-203ENST00000395997 TRIM26Q12899 539 aaPredicted RBP25.94■■□□□ 1.74
SALL4-203ENST00000395997 PEG3Q9GZU2 1588 aa25.84■■□□□ 1.73
SALL4-203ENST00000395997 PABPN1Q86U42 306 aaKnown RBP eCLIP25.79■■□□□ 1.72
SALL4-203ENST00000395997 ABCC8Q09428 1581 aa25.77■■□□□ 1.72
SALL4-203ENST00000395997 PPARGC1BQ86YN6 1023 aaKnown RBP25.61■■□□□ 1.69
SALL4-203ENST00000395997 EHMT2Q96KQ7 1210 aa25.61■■□□□ 1.69
SALL4-203ENST00000395997 ATAD2BQ9ULI0 1458 aa25.55■■□□□ 1.68
SALL4-203ENST00000395997 SOGA1O94964 1423 aa25.48■■□□□ 1.67
SALL4-203ENST00000395997 EEA1Q15075 1411 aa25.45■■□□□ 1.66
SALL4-203ENST00000395997 BAZ1BQ9UIG0 1483 aaKnown RBP25.41■■□□□ 1.66
SALL4-203ENST00000395997 WRNQ14191 1432 aaPredicted RBP eCLIP25.39■■□□□ 1.66
SALL4-203ENST00000395997 RUSC2Q8N2Y8 1516 aa25.38■■□□□ 1.65
SALL4-203ENST00000395997 TNIKQ9UKE5 1360 aa25.33■■□□□ 1.65
SALL4-203ENST00000395997 SYNJ1O43426 1573 aa25.32■■□□□ 1.64
SALL4-203ENST00000395997 ZEB1P37275 1124 aaPredicted RBP25.31■■□□□ 1.64
SALL4-203ENST00000395997 CSRNP3Q8WYN3 585 aa25.31■■□□□ 1.64
SALL4-203ENST00000395997 CEP162Q5TB80 1403 aa25.29■■□□□ 1.64
SALL4-203ENST00000395997 GOLGA3Q08378 1498 aa25.19■■□□□ 1.62
SALL4-203ENST00000395997 HMGXB3Q12766 1538 aa25.16■■□□□ 1.62
SALL4-203ENST00000395997 KIF21BO75037 1637 aa25.15■■□□□ 1.62
SALL4-203ENST00000395997 NCAPD3P42695 1498 aa25.14■■□□□ 1.62
SALL4-203ENST00000395997 TOP2BQ02880 1626 aa25.09■■□□□ 1.61
SALL4-203ENST00000395997 CEP164Q9UPV0 1460 aa25.09■■□□□ 1.61
SALL4-203ENST00000395997 BIVM-ERCC5R4GMW8 1640 aa25.05■■□□□ 1.6
SALL4-203ENST00000395997 UBTFP17480 764 aaKnown RBP25.05■■□□□ 1.6
SALL4-203ENST00000395997 RAPGEF2Q9Y4G8 1499 aa24.89■■□□□ 1.58
SALL4-203ENST00000395997 CFTRP13569 1480 aa24.86■■□□□ 1.57
SALL4-203ENST00000395997 CLIP1P30622 1438 aa24.85■■□□□ 1.57
SALL4-203ENST00000395997 CUX1P39880 1505 aa24.84■■□□□ 1.57
SALL4-203ENST00000395997 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.83■■□□□ 1.57
SALL4-203ENST00000395997 PRDM2Q13029 1718 aa24.8■■□□□ 1.56
SALL4-203ENST00000395997 ERICH3Q5RHP9 1530 aa24.78■■□□□ 1.56
SALL4-203ENST00000395997 PRXQ9BXM0 1461 aa24.77■■□□□ 1.56
SALL4-203ENST00000395997 VPS8Q8N3P4 1428 aa24.77■■□□□ 1.56
SALL4-203ENST00000395997 TTBK1Q5TCY1 1321 aaPredicted RBP24.75■■□□□ 1.55
SALL4-203ENST00000395997 CCER1Q8TC90 406 aaPredicted RBP24.74■■□□□ 1.55
SALL4-203ENST00000395997 KIF27Q86VH2 1401 aa24.62■■□□□ 1.53
SALL4-203ENST00000395997 CADPSQ9ULU8 1353 aa24.57■■□□□ 1.52
SALL4-203ENST00000395997 ARAP1Q96P48 1450 aa24.54■■□□□ 1.52
SALL4-203ENST00000395997 CC2D2AQ9P2K1 1620 aa24.54■■□□□ 1.52
SALL4-203ENST00000395997 APLP2Q06481 763 aa24.44■■□□□ 1.5
SALL4-203ENST00000395997 RANGAP1P46060 587 aaPredicted RBP24.43■■□□□ 1.5
SALL4-203ENST00000395997 IGF1RP08069 1367 aa24.39■■□□□ 1.5
SALL4-203ENST00000395997 CUX2O14529 1486 aa24.39■■□□□ 1.49
SALL4-203ENST00000395997 FGD5Q6ZNL6 1462 aa24.38■■□□□ 1.49
SALL4-203ENST00000395997 ARHGAP35Q9NRY4 1499 aa24.37■■□□□ 1.49
SALL4-203ENST00000395997 HNRNPUL2Q1KMD3 747 aaKnown RBP24.35■■□□□ 1.49
SALL4-203ENST00000395997 FANCD2Q9BXW9 1451 aa24.3■■□□□ 1.48
SALL4-203ENST00000395997 KANK4Q5T7N3 995 aaPredicted RBP24.27■■□□□ 1.48
SALL4-203ENST00000395997 CARMIL1Q5VZK9 1371 aa24.25■■□□□ 1.47
SALL4-203ENST00000395997 DNMBPQ6XZF7 1577 aa24.25■■□□□ 1.47
SALL4-203ENST00000395997 RRBP1Q9P2E9 1410 aaKnown RBP24.22■■□□□ 1.47
SALL4-203ENST00000395997 DIEXFQ68CQ4 756 aaKnown RBP24.2■■□□□ 1.46
SALL4-203ENST00000395997 TOPBP1Q92547 1522 aa24.17■■□□□ 1.46
SALL4-203ENST00000395997 ABCA10Q8WWZ4 1543 aa24.17■■□□□ 1.46
SALL4-203ENST00000395997 NESP48681 1621 aa24.15■■□□□ 1.46
SALL4-203ENST00000395997 MAP3K1Q13233 1512 aa24.15■■□□□ 1.46
SALL4-203ENST00000395997 POLA1P09884 1462 aaPredicted RBP24.14■■□□□ 1.45
SALL4-203ENST00000395997 ZNF316A6NFI3 1004 aaPredicted RBP24.13■■□□□ 1.45
SALL4-203ENST00000395997 RAD54L2Q9Y4B4 1467 aa24.11■■□□□ 1.45
SALL4-203ENST00000395997 LAMC3Q9Y6N6 1575 aa24.1■■□□□ 1.45
SALL4-203ENST00000395997 TIAM1Q13009 1591 aa24.09■■□□□ 1.45
SALL4-203ENST00000395997 CLSPNQ9HAW4 1339 aa24.07■■□□□ 1.44
SALL4-203ENST00000395997 WDR97A6NE52 1622 aa24.05■■□□□ 1.44
SALL4-203ENST00000395997 DHX57Q6P158 1386 aaKnown RBP24.05■■□□□ 1.44
SALL4-203ENST00000395997 CUL7Q14999 1698 aa24.04■■□□□ 1.44
SALL4-203ENST00000395997 CCNB3Q8WWL7 1395 aa24.03■■□□□ 1.44
SALL4-203ENST00000395997 SCAF1Q9H7N4 1312 aaKnown RBP24.01■■□□□ 1.43
SALL4-203ENST00000395997 URB2Q14146 1524 aaKnown RBP24■■□□□ 1.43
SALL4-203ENST00000395997 CFAP43Q8NDM7 1665 aa23.98■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 198.8 ms