RNA–Protein interactions for RNA: ENST00000358540.6

PTPN5-201, Transcript of protein tyrosine phosphatase, non-receptor type 5, humanhuman

TSL 1 (best) BASIC

Gene PTPN5, Length 3,135 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN5-201ENST00000358540 NISCHQ9Y2I1 1504 aa34.23■■■■□ 3.07
PTPN5-201ENST00000358540 CCDC180Q9P1Z9 1646 aa29.24■■■□□ 2.27
PTPN5-201ENST00000358540 SHROOM4Q9ULL8 1493 aa29.04■■■□□ 2.24
PTPN5-201ENST00000358540 ZCCHC6Q5VYS8 1495 aaKnown RBP28.86■■■□□ 2.21
PTPN5-201ENST00000358540 DCAF8L2P0C7V8 631 aa28.74■■■□□ 2.19
PTPN5-201ENST00000358540 SUPT5HO00267 1087 aaKnown RBP28.23■■■□□ 2.11
PTPN5-201ENST00000358540 DCAF1Q9Y4B6 1507 aa28■■■□□ 2.07
PTPN5-201ENST00000358540 ABCC9O60706 1549 aa27.7■■■□□ 2.02
PTPN5-201ENST00000358540 SCRIBQ14160 1630 aa27.48■■□□□ 1.99
PTPN5-201ENST00000358540 MYO15BQ96JP2 1530 aa27.34■■□□□ 1.97
PTPN5-201ENST00000358540 NACADO15069 1562 aa27.19■■□□□ 1.94
PTPN5-201ENST00000358540 CHIC1Q5VXU3 224 aa27.13■■□□□ 1.93
PTPN5-201ENST00000358540 RSF1Q96T23 1441 aaPredicted RBP26.94■■□□□ 1.9
PTPN5-201ENST00000358540 RB1CC1Q8TDY2 1594 aa26.87■■□□□ 1.89
PTPN5-201ENST00000358540 CECR2Q9BXF3 1484 aa26.81■■□□□ 1.88
PTPN5-201ENST00000358540 MROH2BQ7Z745 1585 aa26.64■■□□□ 1.85
PTPN5-201ENST00000358540 WIZO95785 1651 aa26.46■■□□□ 1.83
PTPN5-201ENST00000358540 PABPN1Q86U42 306 aaKnown RBP eCLIP26.44■■□□□ 1.82
PTPN5-201ENST00000358540 UNC13AQ9UPW8 1703 aa26.43■■□□□ 1.82
PTPN5-201ENST00000358540 LOC105371045A0A1W2PR82 267 aa26.38■■□□□ 1.81
PTPN5-201ENST00000358540 BAZ1AQ9NRL2 1556 aaPredicted RBP26.31■■□□□ 1.8
PTPN5-201ENST00000358540 TRIM41Q8WV44 630 aa26.27■■□□□ 1.8
PTPN5-201ENST00000358540 BICRAQ9NZM4 1560 aa26.17■■□□□ 1.78
PTPN5-201ENST00000358540 SMARCA4P51532 1647 aa26.17■■□□□ 1.78
PTPN5-201ENST00000358540 FAM9AQ8IZU1 332 aaPredicted RBP26.14■■□□□ 1.78
PTPN5-201ENST00000358540 EHMT2Q96KQ7 1210 aa26.01■■□□□ 1.75
PTPN5-201ENST00000358540 TOP2AP11388 1531 aaKnown RBP26■■□□□ 1.75
PTPN5-201ENST00000358540 CCDC88BA6NC98 1476 aa25.92■■□□□ 1.74
PTPN5-201ENST00000358540 HRCP23327 699 aa25.89■■□□□ 1.73
PTPN5-201ENST00000358540 PCGF6Q9BYE7 350 aa25.86■■□□□ 1.73
PTPN5-201ENST00000358540 SMARCA2P51531 1590 aa25.85■■□□□ 1.73
PTPN5-201ENST00000358540 EIF4G1Q04637 1599 aaKnown RBP25.82■■□□□ 1.72
PTPN5-201ENST00000358540 ABCC8Q09428 1581 aa25.74■■□□□ 1.71
PTPN5-201ENST00000358540 ATAD2BQ9ULI0 1458 aa25.64■■□□□ 1.7
PTPN5-201ENST00000358540 PEG3Q9GZU2 1588 aa25.62■■□□□ 1.69
PTPN5-201ENST00000358540 BAZ1BQ9UIG0 1483 aaKnown RBP25.56■■□□□ 1.68
PTPN5-201ENST00000358540 PPARGC1BQ86YN6 1023 aaKnown RBP25.47■■□□□ 1.67
PTPN5-201ENST00000358540 SOGA1O94964 1423 aa25.41■■□□□ 1.66
PTPN5-201ENST00000358540 TRIM26Q12899 539 aaPredicted RBP25.38■■□□□ 1.65
PTPN5-201ENST00000358540 WRNQ14191 1432 aaPredicted RBP eCLIP25.34■■□□□ 1.65
PTPN5-201ENST00000358540 RUSC2Q8N2Y8 1516 aa25.32■■□□□ 1.64
PTPN5-201ENST00000358540 SYNJ1O43426 1573 aa25.22■■□□□ 1.63
PTPN5-201ENST00000358540 CSRNP3Q8WYN3 585 aa25.2■■□□□ 1.63
PTPN5-201ENST00000358540 NCAPD3P42695 1498 aa25.18■■□□□ 1.62
PTPN5-201ENST00000358540 UBTFP17480 764 aaKnown RBP25.13■■□□□ 1.61
PTPN5-201ENST00000358540 HMGXB3Q12766 1538 aa25.12■■□□□ 1.61
PTPN5-201ENST00000358540 EEA1Q15075 1411 aa25.07■■□□□ 1.6
PTPN5-201ENST00000358540 CEP162Q5TB80 1403 aa25.04■■□□□ 1.6
PTPN5-201ENST00000358540 TTBK1Q5TCY1 1321 aaPredicted RBP25.04■■□□□ 1.6
PTPN5-201ENST00000358540 PELP1Q8IZL8 1130 aaKnown RBP25.02■■□□□ 1.6
PTPN5-201ENST00000358540 TNIKQ9UKE5 1360 aa24.99■■□□□ 1.59
PTPN5-201ENST00000358540 GOLGA3Q08378 1498 aa24.95■■□□□ 1.58
PTPN5-201ENST00000358540 TOP2BQ02880 1626 aa24.89■■□□□ 1.58
PTPN5-201ENST00000358540 RANGAP1P46060 587 aaPredicted RBP24.88■■□□□ 1.57
PTPN5-201ENST00000358540 CFTRP13569 1480 aa24.87■■□□□ 1.57
PTPN5-201ENST00000358540 CC2D2AQ9P2K1 1620 aa24.85■■□□□ 1.57
PTPN5-201ENST00000358540 CEP164Q9UPV0 1460 aa24.85■■□□□ 1.57
PTPN5-201ENST00000358540 CUX1P39880 1505 aa24.82■■□□□ 1.56
PTPN5-201ENST00000358540 RAPGEF2Q9Y4G8 1499 aa24.8■■□□□ 1.56
PTPN5-201ENST00000358540 BIVM-ERCC5R4GMW8 1640 aa24.78■■□□□ 1.56
PTPN5-201ENST00000358540 KIF21BO75037 1637 aa24.76■■□□□ 1.55
PTPN5-201ENST00000358540 CADPSQ9ULU8 1353 aa24.72■■□□□ 1.55
PTPN5-201ENST00000358540 CLIP1P30622 1438 aa24.68■■□□□ 1.54
PTPN5-201ENST00000358540 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.59■■□□□ 1.53
PTPN5-201ENST00000358540 KIF27Q86VH2 1401 aa24.58■■□□□ 1.53
PTPN5-201ENST00000358540 SCAF1Q9H7N4 1312 aaKnown RBP24.56■■□□□ 1.52
PTPN5-201ENST00000358540 PRXQ9BXM0 1461 aa24.55■■□□□ 1.52
PTPN5-201ENST00000358540 ZEB1P37275 1124 aaPredicted RBP24.53■■□□□ 1.52
PTPN5-201ENST00000358540 PRDM2Q13029 1718 aa24.53■■□□□ 1.52
PTPN5-201ENST00000358540 NESP48681 1621 aa24.53■■□□□ 1.52
PTPN5-201ENST00000358540 DNAJC5BQ9UF47 199 aa24.52■■□□□ 1.52
PTPN5-201ENST00000358540 CUX2O14529 1486 aa24.5■■□□□ 1.51
PTPN5-201ENST00000358540 FANCD2Q9BXW9 1451 aa24.49■■□□□ 1.51
PTPN5-201ENST00000358540 VPS8Q8N3P4 1428 aa24.48■■□□□ 1.51
PTPN5-201ENST00000358540 FGD5Q6ZNL6 1462 aa24.47■■□□□ 1.51
PTPN5-201ENST00000358540 CCER1Q8TC90 406 aaPredicted RBP24.45■■□□□ 1.5
PTPN5-201ENST00000358540 ERICH3Q5RHP9 1530 aa24.45■■□□□ 1.5
PTPN5-201ENST00000358540 APLP2Q06481 763 aa24.42■■□□□ 1.5
PTPN5-201ENST00000358540 IGF1RP08069 1367 aa24.37■■□□□ 1.49
PTPN5-201ENST00000358540 RAD54L2Q9Y4B4 1467 aa24.33■■□□□ 1.49
PTPN5-201ENST00000358540 ARAP1Q96P48 1450 aa24.32■■□□□ 1.48
PTPN5-201ENST00000358540 HNRNPUL2Q1KMD3 747 aaKnown RBP24.31■■□□□ 1.48
PTPN5-201ENST00000358540 CARMIL1Q5VZK9 1371 aa24.27■■□□□ 1.48
PTPN5-201ENST00000358540 TOPBP1Q92547 1522 aa24.27■■□□□ 1.48
PTPN5-201ENST00000358540 DNMBPQ6XZF7 1577 aa24.24■■□□□ 1.47
PTPN5-201ENST00000358540 POLA1P09884 1462 aaPredicted RBP24.24■■□□□ 1.47
PTPN5-201ENST00000358540 KANK4Q5T7N3 995 aaPredicted RBP24.2■■□□□ 1.46
PTPN5-201ENST00000358540 ARHGAP35Q9NRY4 1499 aa24.2■■□□□ 1.46
PTPN5-201ENST00000358540 URB2Q14146 1524 aaKnown RBP24.16■■□□□ 1.46
PTPN5-201ENST00000358540 LAMC3Q9Y6N6 1575 aa24.16■■□□□ 1.46
PTPN5-201ENST00000358540 P3H3Q8IVL6 736 aa24.13■■□□□ 1.45
PTPN5-201ENST00000358540 ABCA10Q8WWZ4 1543 aa24.12■■□□□ 1.45
PTPN5-201ENST00000358540 PDS5BQ9NTI5 1447 aa24.08■■□□□ 1.45
PTPN5-201ENST00000358540 TDRD9Q8NDG6 1382 aaKnown RBP24.08■■□□□ 1.45
PTPN5-201ENST00000358540 MYT1Q01538 1121 aa24.04■■□□□ 1.44
PTPN5-201ENST00000358540 KIF21AQ7Z4S6 1674 aa24.01■■□□□ 1.43
PTPN5-201ENST00000358540 ATP1B4Q9UN42 357 aaPredicted RBP24■■□□□ 1.43
PTPN5-201ENST00000358540 ACIN1Q9UKV3 1341 aaKnown RBP23.93■■□□□ 1.42
PTPN5-201ENST00000358540 FHOD3Q2V2M9 1422 aa23.92■■□□□ 1.42
PTPN5-201ENST00000358540 ITGAEP38570 1179 aa23.9■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms