RNA–Protein interactions for RNA: ENST00000307767.12

TVP23B-201, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TVP23B, Length 2,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-201ENST00000307767 NISCHQ9Y2I1 1504 aa36.03■■■■□ 3.36
TVP23B-201ENST00000307767 CCDC180Q9P1Z9 1646 aa30.92■■■□□ 2.54
TVP23B-201ENST00000307767 ZCCHC6Q5VYS8 1495 aaKnown RBP30.4■■■□□ 2.46
TVP23B-201ENST00000307767 SHROOM4Q9ULL8 1493 aa30■■■□□ 2.39
TVP23B-201ENST00000307767 DCAF1Q9Y4B6 1507 aa29.69■■■□□ 2.34
TVP23B-201ENST00000307767 DCAF8L2P0C7V8 631 aa29.62■■■□□ 2.33
TVP23B-201ENST00000307767 SUPT5HO00267 1087 aaKnown RBP29.15■■■□□ 2.26
TVP23B-201ENST00000307767 MYO15BQ96JP2 1530 aa29.07■■■□□ 2.24
TVP23B-201ENST00000307767 ABCC9O60706 1549 aa28.91■■■□□ 2.22
TVP23B-201ENST00000307767 SCRIBQ14160 1630 aa28.71■■■□□ 2.19
TVP23B-201ENST00000307767 NACADO15069 1562 aa28.7■■■□□ 2.19
TVP23B-201ENST00000307767 RSF1Q96T23 1441 aaPredicted RBP28.29■■■□□ 2.12
TVP23B-201ENST00000307767 RB1CC1Q8TDY2 1594 aa28.28■■■□□ 2.12
TVP23B-201ENST00000307767 CHIC1Q5VXU3 224 aa28.28■■■□□ 2.12
TVP23B-201ENST00000307767 CECR2Q9BXF3 1484 aa28.09■■■□□ 2.09
TVP23B-201ENST00000307767 MROH2BQ7Z745 1585 aa27.95■■■□□ 2.06
TVP23B-201ENST00000307767 UNC13AQ9UPW8 1703 aa27.84■■■□□ 2.05
TVP23B-201ENST00000307767 WIZO95785 1651 aa27.71■■■□□ 2.03
TVP23B-201ENST00000307767 BAZ1AQ9NRL2 1556 aaPredicted RBP27.68■■■□□ 2.02
TVP23B-201ENST00000307767 BICRAQ9NZM4 1560 aa27.63■■■□□ 2.01
TVP23B-201ENST00000307767 SMARCA4P51532 1647 aa27.52■■■□□ 2
TVP23B-201ENST00000307767 PABPN1Q86U42 306 aaKnown RBP eCLIP27.48■■□□□ 1.99
TVP23B-201ENST00000307767 TOP2AP11388 1531 aaKnown RBP27.35■■□□□ 1.97
TVP23B-201ENST00000307767 LOC105371045A0A1W2PR82 267 aa27.31■■□□□ 1.96
TVP23B-201ENST00000307767 EIF4G1Q04637 1599 aaKnown RBP27.27■■□□□ 1.96
TVP23B-201ENST00000307767 TRIM41Q8WV44 630 aa27.26■■□□□ 1.95
TVP23B-201ENST00000307767 CCDC88BA6NC98 1476 aa27.19■■□□□ 1.94
TVP23B-201ENST00000307767 SMARCA2P51531 1590 aa27.18■■□□□ 1.94
TVP23B-201ENST00000307767 PEG3Q9GZU2 1588 aa27.14■■□□□ 1.94
TVP23B-201ENST00000307767 ATAD2BQ9ULI0 1458 aa26.97■■□□□ 1.91
TVP23B-201ENST00000307767 FAM9AQ8IZU1 332 aaPredicted RBP26.91■■□□□ 1.9
TVP23B-201ENST00000307767 ABCC8Q09428 1581 aa26.85■■□□□ 1.89
TVP23B-201ENST00000307767 BAZ1BQ9UIG0 1483 aaKnown RBP26.77■■□□□ 1.88
TVP23B-201ENST00000307767 PCGF6Q9BYE7 350 aa26.64■■□□□ 1.86
TVP23B-201ENST00000307767 NCAPD3P42695 1498 aa26.59■■□□□ 1.85
TVP23B-201ENST00000307767 EHMT2Q96KQ7 1210 aa26.56■■□□□ 1.84
TVP23B-201ENST00000307767 SOGA1O94964 1423 aa26.53■■□□□ 1.84
TVP23B-201ENST00000307767 HMGXB3Q12766 1538 aa26.53■■□□□ 1.84
TVP23B-201ENST00000307767 WRNQ14191 1432 aaPredicted RBP eCLIP26.52■■□□□ 1.84
TVP23B-201ENST00000307767 RUSC2Q8N2Y8 1516 aa26.45■■□□□ 1.82
TVP23B-201ENST00000307767 SYNJ1O43426 1573 aa26.44■■□□□ 1.82
TVP23B-201ENST00000307767 HRCP23327 699 aa26.38■■□□□ 1.81
TVP23B-201ENST00000307767 TRIM26Q12899 539 aaPredicted RBP26.37■■□□□ 1.81
TVP23B-201ENST00000307767 EEA1Q15075 1411 aa26.36■■□□□ 1.81
TVP23B-201ENST00000307767 CSRNP3Q8WYN3 585 aa26.3■■□□□ 1.8
TVP23B-201ENST00000307767 CFTRP13569 1480 aa26.2■■□□□ 1.78
TVP23B-201ENST00000307767 TNIKQ9UKE5 1360 aa26.19■■□□□ 1.78
TVP23B-201ENST00000307767 TOP2BQ02880 1626 aa26.19■■□□□ 1.78
TVP23B-201ENST00000307767 BIVM-ERCC5R4GMW8 1640 aa26.13■■□□□ 1.77
TVP23B-201ENST00000307767 CEP162Q5TB80 1403 aa26.12■■□□□ 1.77
TVP23B-201ENST00000307767 CC2D2AQ9P2K1 1620 aa26.11■■□□□ 1.77
TVP23B-201ENST00000307767 GOLGA3Q08378 1498 aa26.1■■□□□ 1.77
TVP23B-201ENST00000307767 CUX1P39880 1505 aa26.06■■□□□ 1.76
TVP23B-201ENST00000307767 KIF21BO75037 1637 aa26.03■■□□□ 1.76
TVP23B-201ENST00000307767 CEP164Q9UPV0 1460 aa26.02■■□□□ 1.76
TVP23B-201ENST00000307767 UBTFP17480 764 aaKnown RBP25.99■■□□□ 1.75
TVP23B-201ENST00000307767 CADPSQ9ULU8 1353 aa25.97■■□□□ 1.75
TVP23B-201ENST00000307767 PPARGC1BQ86YN6 1023 aaKnown RBP25.97■■□□□ 1.75
TVP23B-201ENST00000307767 RAPGEF2Q9Y4G8 1499 aa25.91■■□□□ 1.74
TVP23B-201ENST00000307767 PRDM2Q13029 1718 aa25.9■■□□□ 1.74
TVP23B-201ENST00000307767 PRXQ9BXM0 1461 aa25.82■■□□□ 1.72
TVP23B-201ENST00000307767 CLIP1P30622 1438 aa25.75■■□□□ 1.71
TVP23B-201ENST00000307767 KIF27Q86VH2 1401 aa25.74■■□□□ 1.71
TVP23B-201ENST00000307767 ERICH3Q5RHP9 1530 aa25.73■■□□□ 1.71
TVP23B-201ENST00000307767 FANCD2Q9BXW9 1451 aa25.68■■□□□ 1.7
TVP23B-201ENST00000307767 NESP48681 1621 aa25.65■■□□□ 1.7
TVP23B-201ENST00000307767 FGD5Q6ZNL6 1462 aa25.63■■□□□ 1.69
TVP23B-201ENST00000307767 VPS8Q8N3P4 1428 aa25.61■■□□□ 1.69
TVP23B-201ENST00000307767 DNAJC5BQ9UF47 199 aa25.6■■□□□ 1.69
TVP23B-201ENST00000307767 CUX2O14529 1486 aa25.59■■□□□ 1.69
TVP23B-201ENST00000307767 IGF1RP08069 1367 aa25.58■■□□□ 1.69
TVP23B-201ENST00000307767 TTBK1Q5TCY1 1321 aaPredicted RBP25.57■■□□□ 1.68
TVP23B-201ENST00000307767 ZEB1P37275 1124 aaPredicted RBP25.52■■□□□ 1.68
TVP23B-201ENST00000307767 DNMBPQ6XZF7 1577 aa25.5■■□□□ 1.67
TVP23B-201ENST00000307767 ARAP1Q96P48 1450 aa25.48■■□□□ 1.67
TVP23B-201ENST00000307767 RANGAP1P46060 587 aaPredicted RBP25.48■■□□□ 1.67
TVP23B-201ENST00000307767 TOPBP1Q92547 1522 aa25.48■■□□□ 1.67
TVP23B-201ENST00000307767 LAMC3Q9Y6N6 1575 aa25.48■■□□□ 1.67
TVP23B-201ENST00000307767 POLA1P09884 1462 aaPredicted RBP25.43■■□□□ 1.66
TVP23B-201ENST00000307767 RAD54L2Q9Y4B4 1467 aa25.42■■□□□ 1.66
TVP23B-201ENST00000307767 CARMIL1Q5VZK9 1371 aa25.39■■□□□ 1.65
TVP23B-201ENST00000307767 ABCA10Q8WWZ4 1543 aa25.39■■□□□ 1.65
TVP23B-201ENST00000307767 URB2Q14146 1524 aaKnown RBP25.38■■□□□ 1.65
TVP23B-201ENST00000307767 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.36■■□□□ 1.65
TVP23B-201ENST00000307767 ARHGAP35Q9NRY4 1499 aa25.36■■□□□ 1.65
TVP23B-201ENST00000307767 PDS5BQ9NTI5 1447 aa25.28■■□□□ 1.64
TVP23B-201ENST00000307767 APLP2Q06481 763 aa25.23■■□□□ 1.63
TVP23B-201ENST00000307767 WDR97A6NE52 1622 aa25.21■■□□□ 1.63
TVP23B-201ENST00000307767 CCER1Q8TC90 406 aaPredicted RBP25.21■■□□□ 1.63
TVP23B-201ENST00000307767 KANK4Q5T7N3 995 aaPredicted RBP25.2■■□□□ 1.62
TVP23B-201ENST00000307767 KIF21AQ7Z4S6 1674 aa25.19■■□□□ 1.62
TVP23B-201ENST00000307767 ABCA5Q8WWZ7 1642 aa25.12■■□□□ 1.61
TVP23B-201ENST00000307767 TDRD9Q8NDG6 1382 aaKnown RBP25.11■■□□□ 1.61
TVP23B-201ENST00000307767 CUL7Q14999 1698 aa25.1■■□□□ 1.61
TVP23B-201ENST00000307767 HNRNPUL2Q1KMD3 747 aaKnown RBP25.07■■□□□ 1.6
TVP23B-201ENST00000307767 TARBP1Q13395 1621 aaKnown RBP25.05■■□□□ 1.6
TVP23B-201ENST00000307767 GAPVD1Q14C86 1478 aa25.04■■□□□ 1.6
TVP23B-201ENST00000307767 MAP3K1Q13233 1512 aa24.99■■□□□ 1.59
TVP23B-201ENST00000307767 RRBP1Q9P2E9 1410 aaKnown RBP24.98■■□□□ 1.59
TVP23B-201ENST00000307767 MRC2Q9UBG0 1479 aa24.95■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms