RNA–Protein interactions for RNA: ENST00000442747.5

SHISA5-208, Transcript of shisa family member 5, humanhuman

TSL 2 BASIC

Gene SHISA5, Length 2,250 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA5-208ENST00000442747 NISCHQ9Y2I1 1504 aa35.25■■■■□ 3.23
SHISA5-208ENST00000442747 CCDC180Q9P1Z9 1646 aa30.96■■■□□ 2.55
SHISA5-208ENST00000442747 ABCC9O60706 1549 aa30.12■■■□□ 2.41
SHISA5-208ENST00000442747 DCAF8L2P0C7V8 631 aa29.53■■■□□ 2.32
SHISA5-208ENST00000442747 ZCCHC6Q5VYS8 1495 aaKnown RBP29.5■■■□□ 2.31
SHISA5-208ENST00000442747 SHROOM4Q9ULL8 1493 aa29.46■■■□□ 2.31
SHISA5-208ENST00000442747 NACADO15069 1562 aa29.1■■■□□ 2.25
SHISA5-208ENST00000442747 DCAF1Q9Y4B6 1507 aa29.09■■■□□ 2.25
SHISA5-208ENST00000442747 MYO15BQ96JP2 1530 aa29.04■■■□□ 2.24
SHISA5-208ENST00000442747 RB1CC1Q8TDY2 1594 aa29.02■■■□□ 2.24
SHISA5-208ENST00000442747 SUPT5HO00267 1087 aaKnown RBP28.71■■■□□ 2.19
SHISA5-208ENST00000442747 SCRIBQ14160 1630 aa28.45■■■□□ 2.14
SHISA5-208ENST00000442747 PABPN1Q86U42 306 aaKnown RBP eCLIP28.34■■■□□ 2.13
SHISA5-208ENST00000442747 UNC13AQ9UPW8 1703 aa28.3■■■□□ 2.12
SHISA5-208ENST00000442747 BICRAQ9NZM4 1560 aa28.16■■■□□ 2.1
SHISA5-208ENST00000442747 CHIC1Q5VXU3 224 aa27.75■■■□□ 2.03
SHISA5-208ENST00000442747 RSF1Q96T23 1441 aaPredicted RBP27.51■■■□□ 2
SHISA5-208ENST00000442747 CECR2Q9BXF3 1484 aa27.5■■□□□ 1.99
SHISA5-208ENST00000442747 EIF4G1Q04637 1599 aaKnown RBP27.39■■□□□ 1.98
SHISA5-208ENST00000442747 DNAJC5BQ9UF47 199 aa27.36■■□□□ 1.97
SHISA5-208ENST00000442747 BAZ1AQ9NRL2 1556 aaPredicted RBP27.25■■□□□ 1.95
SHISA5-208ENST00000442747 MROH2BQ7Z745 1585 aa27.21■■□□□ 1.95
SHISA5-208ENST00000442747 SMARCA4P51532 1647 aa27.2■■□□□ 1.94
SHISA5-208ENST00000442747 CC2D2AQ9P2K1 1620 aa27.17■■□□□ 1.94
SHISA5-208ENST00000442747 ATAD2BQ9ULI0 1458 aa27.02■■□□□ 1.92
SHISA5-208ENST00000442747 WIZO95785 1651 aa26.99■■□□□ 1.91
SHISA5-208ENST00000442747 SMARCA2P51531 1590 aa26.93■■□□□ 1.9
SHISA5-208ENST00000442747 NCAPD3P42695 1498 aa26.92■■□□□ 1.9
SHISA5-208ENST00000442747 LOC105371045A0A1W2PR82 267 aa26.9■■□□□ 1.9
SHISA5-208ENST00000442747 PEG3Q9GZU2 1588 aa26.89■■□□□ 1.9
SHISA5-208ENST00000442747 BAZ1BQ9UIG0 1483 aaKnown RBP26.8■■□□□ 1.88
SHISA5-208ENST00000442747 TRIM41Q8WV44 630 aa26.78■■□□□ 1.88
SHISA5-208ENST00000442747 HMGXB3Q12766 1538 aa26.74■■□□□ 1.87
SHISA5-208ENST00000442747 TOP2AP11388 1531 aaKnown RBP26.6■■□□□ 1.85
SHISA5-208ENST00000442747 FAM9AQ8IZU1 332 aaPredicted RBP26.53■■□□□ 1.84
SHISA5-208ENST00000442747 PCGF6Q9BYE7 350 aa26.45■■□□□ 1.83
SHISA5-208ENST00000442747 CCDC88BA6NC98 1476 aa26.45■■□□□ 1.82
SHISA5-208ENST00000442747 EHMT2Q96KQ7 1210 aa26.3■■□□□ 1.8
SHISA5-208ENST00000442747 ABCC8Q09428 1581 aa26.24■■□□□ 1.79
SHISA5-208ENST00000442747 CADPSQ9ULU8 1353 aa26.21■■□□□ 1.79
SHISA5-208ENST00000442747 NESP48681 1621 aa26.2■■□□□ 1.78
SHISA5-208ENST00000442747 HRCP23327 699 aa26.19■■□□□ 1.78
SHISA5-208ENST00000442747 CFTRP13569 1480 aa26.11■■□□□ 1.77
SHISA5-208ENST00000442747 TRIM26Q12899 539 aaPredicted RBP26.06■■□□□ 1.76
SHISA5-208ENST00000442747 LAMC3Q9Y6N6 1575 aa26.06■■□□□ 1.76
SHISA5-208ENST00000442747 PDS5BQ9NTI5 1447 aa25.96■■□□□ 1.75
SHISA5-208ENST00000442747 SOGA1O94964 1423 aa25.91■■□□□ 1.74
SHISA5-208ENST00000442747 ERCC6Q03468 1493 aa25.89■■□□□ 1.73
SHISA5-208ENST00000442747 FANCD2Q9BXW9 1451 aa25.88■■□□□ 1.73
SHISA5-208ENST00000442747 WRNQ14191 1432 aaPredicted RBP eCLIP25.85■■□□□ 1.73
SHISA5-208ENST00000442747 RUSC2Q8N2Y8 1516 aa25.81■■□□□ 1.72
SHISA5-208ENST00000442747 CEP164Q9UPV0 1460 aa25.77■■□□□ 1.72
SHISA5-208ENST00000442747 KIF21AQ7Z4S6 1674 aa25.75■■□□□ 1.71
SHISA5-208ENST00000442747 SYNJ1O43426 1573 aa25.75■■□□□ 1.71
SHISA5-208ENST00000442747 CSRNP3Q8WYN3 585 aa25.72■■□□□ 1.71
SHISA5-208ENST00000442747 EEA1Q15075 1411 aa25.72■■□□□ 1.71
SHISA5-208ENST00000442747 PPARGC1BQ86YN6 1023 aaKnown RBP25.72■■□□□ 1.71
SHISA5-208ENST00000442747 PRDM2Q13029 1718 aa25.71■■□□□ 1.71
SHISA5-208ENST00000442747 MRC2Q9UBG0 1479 aa25.63■■□□□ 1.69
SHISA5-208ENST00000442747 CEP162Q5TB80 1403 aa25.6■■□□□ 1.69
SHISA5-208ENST00000442747 TNIKQ9UKE5 1360 aa25.6■■□□□ 1.69
SHISA5-208ENST00000442747 URB2Q14146 1524 aaKnown RBP25.58■■□□□ 1.69
SHISA5-208ENST00000442747 UBTFP17480 764 aaKnown RBP25.56■■□□□ 1.68
SHISA5-208ENST00000442747 THOC2Q8NI27 1593 aaKnown RBP25.55■■□□□ 1.68
SHISA5-208ENST00000442747 GOLGA3Q08378 1498 aa25.52■■□□□ 1.68
SHISA5-208ENST00000442747 TOPBP1Q92547 1522 aa25.49■■□□□ 1.67
SHISA5-208ENST00000442747 WDR62O43379 1518 aa25.49■■□□□ 1.67
SHISA5-208ENST00000442747 CUX1P39880 1505 aa25.48■■□□□ 1.67
SHISA5-208ENST00000442747 TOP2BQ02880 1626 aa25.46■■□□□ 1.67
SHISA5-208ENST00000442747 DNMBPQ6XZF7 1577 aa25.44■■□□□ 1.66
SHISA5-208ENST00000442747 KIF21BO75037 1637 aa25.39■■□□□ 1.66
SHISA5-208ENST00000442747 BIVM-ERCC5R4GMW8 1640 aa25.39■■□□□ 1.65
SHISA5-208ENST00000442747 CUX2O14529 1486 aa25.37■■□□□ 1.65
SHISA5-208ENST00000442747 TTBK1Q5TCY1 1321 aaPredicted RBP25.35■■□□□ 1.65
SHISA5-208ENST00000442747 FGD5Q6ZNL6 1462 aa25.33■■□□□ 1.65
SHISA5-208ENST00000442747 POLA1P09884 1462 aaPredicted RBP25.33■■□□□ 1.64
SHISA5-208ENST00000442747 RAPGEF2Q9Y4G8 1499 aa25.3■■□□□ 1.64
SHISA5-208ENST00000442747 ZEB1P37275 1124 aaPredicted RBP25.29■■□□□ 1.64
SHISA5-208ENST00000442747 RAD54L2Q9Y4B4 1467 aa25.27■■□□□ 1.64
SHISA5-208ENST00000442747 CLIP1P30622 1438 aa25.21■■□□□ 1.63
SHISA5-208ENST00000442747 IFT140Q96RY7 1462 aa25.21■■□□□ 1.63
SHISA5-208ENST00000442747 RANGAP1P46060 587 aaPredicted RBP25.15■■□□□ 1.62
SHISA5-208ENST00000442747 TDRD9Q8NDG6 1382 aaKnown RBP25.14■■□□□ 1.61
SHISA5-208ENST00000442747 TARBP1Q13395 1621 aaKnown RBP25.13■■□□□ 1.61
SHISA5-208ENST00000442747 ZNF608Q9ULD9 1512 aaPredicted RBP25.13■■□□□ 1.61
SHISA5-208ENST00000442747 PRXQ9BXM0 1461 aa25.11■■□□□ 1.61
SHISA5-208ENST00000442747 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.1■■□□□ 1.61
SHISA5-208ENST00000442747 KIF27Q86VH2 1401 aa25.08■■□□□ 1.61
SHISA5-208ENST00000442747 AQRO60306 1485 aaKnown RBP eCLIP25.08■■□□□ 1.61
SHISA5-208ENST00000442747 ABCA10Q8WWZ4 1543 aa25.08■■□□□ 1.61
SHISA5-208ENST00000442747 ERICH3Q5RHP9 1530 aa25.06■■□□□ 1.6
SHISA5-208ENST00000442747 VPS8Q8N3P4 1428 aa25.06■■□□□ 1.6
SHISA5-208ENST00000442747 CCER1Q8TC90 406 aaPredicted RBP25■■□□□ 1.59
SHISA5-208ENST00000442747 GAPVD1Q14C86 1478 aa24.95■■□□□ 1.59
SHISA5-208ENST00000442747 WDR97A6NE52 1622 aa24.95■■□□□ 1.58
SHISA5-208ENST00000442747 EIF4G3O43432 1585 aaKnown RBP24.93■■□□□ 1.58
SHISA5-208ENST00000442747 APLP2Q06481 763 aa24.88■■□□□ 1.57
SHISA5-208ENST00000442747 ABCA5Q8WWZ7 1642 aa24.88■■□□□ 1.57
SHISA5-208ENST00000442747 ARAP1Q96P48 1450 aa24.87■■□□□ 1.57
SHISA5-208ENST00000442747 GRIN2BQ13224 1484 aa24.87■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms