RNA–Protein interactions for RNA: ENST00000413384.6

SLC4A2-202, Transcript of solute carrier family 4 member 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SLC4A2, Length 4,142 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC4A2-202ENST00000413384 NISCHQ9Y2I1 1504 aa29.64■■■□□ 2.33
SLC4A2-202ENST00000413384 DCAF8L2P0C7V8 631 aa27.4■■□□□ 1.98
SLC4A2-202ENST00000413384 SHROOM4Q9ULL8 1493 aa26.65■■□□□ 1.86
SLC4A2-202ENST00000413384 SUPT5HO00267 1087 aaKnown RBP26.54■■□□□ 1.84
SLC4A2-202ENST00000413384 EHMT2Q96KQ7 1210 aa25.66■■□□□ 1.7
SLC4A2-202ENST00000413384 PCGF6Q9BYE7 350 aa25.07■■□□□ 1.6
SLC4A2-202ENST00000413384 CHIC1Q5VXU3 224 aa25.02■■□□□ 1.6
SLC4A2-202ENST00000413384 FAM9AQ8IZU1 332 aaPredicted RBP24.89■■□□□ 1.58
SLC4A2-202ENST00000413384 ZCCHC6Q5VYS8 1495 aaKnown RBP24.87■■□□□ 1.57
SLC4A2-202ENST00000413384 HRCP23327 699 aa24.73■■□□□ 1.55
SLC4A2-202ENST00000413384 LOC105371045A0A1W2PR82 267 aa24.61■■□□□ 1.53
SLC4A2-202ENST00000413384 CCDC180Q9P1Z9 1646 aa24.61■■□□□ 1.53
SLC4A2-202ENST00000413384 TTBK1Q5TCY1 1321 aaPredicted RBP24.6■■□□□ 1.53
SLC4A2-202ENST00000413384 TRIM41Q8WV44 630 aa24.59■■□□□ 1.53
SLC4A2-202ENST00000413384 PPARGC1BQ86YN6 1023 aaKnown RBP24.57■■□□□ 1.52
SLC4A2-202ENST00000413384 TRIM26Q12899 539 aaPredicted RBP24.23■■□□□ 1.47
SLC4A2-202ENST00000413384 RANGAP1P46060 587 aaPredicted RBP24.22■■□□□ 1.47
SLC4A2-202ENST00000413384 MYO15BQ96JP2 1530 aa24.18■■□□□ 1.46
SLC4A2-202ENST00000413384 ABCC9O60706 1549 aa24.03■■□□□ 1.44
SLC4A2-202ENST00000413384 ZEB1P37275 1124 aaPredicted RBP24.02■■□□□ 1.44
SLC4A2-202ENST00000413384 SCRIBQ14160 1630 aa23.87■■□□□ 1.41
SLC4A2-202ENST00000413384 DCAF1Q9Y4B6 1507 aa23.86■■□□□ 1.41
SLC4A2-202ENST00000413384 CCER1Q8TC90 406 aaPredicted RBP23.78■■□□□ 1.4
SLC4A2-202ENST00000413384 UBTFP17480 764 aaKnown RBP23.73■■□□□ 1.39
SLC4A2-202ENST00000413384 RSF1Q96T23 1441 aaPredicted RBP23.69■■□□□ 1.38
SLC4A2-202ENST00000413384 PELP1Q8IZL8 1130 aaKnown RBP23.67■■□□□ 1.38
SLC4A2-202ENST00000413384 APLP2Q06481 763 aa23.63■■□□□ 1.37
SLC4A2-202ENST00000413384 PABPN1Q86U42 306 aaKnown RBP eCLIP23.56■■□□□ 1.367e-9■■■□□ 16.9
SLC4A2-202ENST00000413384 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.44■■□□□ 1.34
SLC4A2-202ENST00000413384 CENPBP07199 599 aaPredicted RBP23.34■■□□□ 1.33
SLC4A2-202ENST00000413384 ATP1B4Q9UN42 357 aaPredicted RBP23.31■■□□□ 1.32
SLC4A2-202ENST00000413384 CECR2Q9BXF3 1484 aa23.29■■□□□ 1.32
SLC4A2-202ENST00000413384 YTHDC1Q96MU7 727 aaKnown RBP23.27■■□□□ 1.32
SLC4A2-202ENST00000413384 NACADO15069 1562 aa23.25■■□□□ 1.31
SLC4A2-202ENST00000413384 RB1CC1Q8TDY2 1594 aa23.23■■□□□ 1.31
SLC4A2-202ENST00000413384 SCAF1Q9H7N4 1312 aaKnown RBP23.18■■□□□ 1.3
SLC4A2-202ENST00000413384 HNRNPUL2Q1KMD3 747 aaKnown RBP23.15■■□□□ 1.3
SLC4A2-202ENST00000413384 CSRNP3Q8WYN3 585 aa23.14■■□□□ 1.3
SLC4A2-202ENST00000413384 MROH2BQ7Z745 1585 aa23.08■■□□□ 1.29
SLC4A2-202ENST00000413384 DIEXFQ68CQ4 756 aaKnown RBP23.04■■□□□ 1.28
SLC4A2-202ENST00000413384 GTF3C3Q9Y5Q9 886 aa23.03■■□□□ 1.28
SLC4A2-202ENST00000413384 ITGAEP38570 1179 aa23.01■■□□□ 1.27
SLC4A2-202ENST00000413384 ACIN1Q9UKV3 1341 aaKnown RBP22.94■■□□□ 1.26
SLC4A2-202ENST00000413384 BAZ1AQ9NRL2 1556 aaPredicted RBP22.9■■□□□ 1.26
SLC4A2-202ENST00000413384 NEUROD1Q13562 356 aa22.88■■□□□ 1.25
SLC4A2-202ENST00000413384 WIZO95785 1651 aa22.84■■□□□ 1.25
SLC4A2-202ENST00000413384 CEP162Q5TB80 1403 aa22.75■■□□□ 1.23
SLC4A2-202ENST00000413384 MYT1Q01538 1121 aa22.72■■□□□ 1.23
SLC4A2-202ENST00000413384 CCDC88BA6NC98 1476 aa22.69■■□□□ 1.22
SLC4A2-202ENST00000413384 ZNF316A6NFI3 1004 aaPredicted RBP22.68■■□□□ 1.22
SLC4A2-202ENST00000413384 SOGA1O94964 1423 aa22.68■■□□□ 1.22
SLC4A2-202ENST00000413384 ABCC8Q09428 1581 aa22.66■■□□□ 1.22
SLC4A2-202ENST00000413384 TNIKQ9UKE5 1360 aa22.65■■□□□ 1.22
SLC4A2-202ENST00000413384 EEA1Q15075 1411 aa22.64■■□□□ 1.21
SLC4A2-202ENST00000413384 WRNQ14191 1432 aaPredicted RBP eCLIP22.63■■□□□ 1.21
SLC4A2-202ENST00000413384 GOLGA3Q08378 1498 aa22.56■■□□□ 1.2
SLC4A2-202ENST00000413384 CLIP1P30622 1438 aa22.53■■□□□ 1.2
SLC4A2-202ENST00000413384 TOP2AP11388 1531 aaKnown RBP22.52■■□□□ 1.2
SLC4A2-202ENST00000413384 CNGB1Q14028 1251 aaPredicted RBP22.5■■□□□ 1.19
SLC4A2-202ENST00000413384 BAZ1BQ9UIG0 1483 aaKnown RBP22.42■■□□□ 1.18
SLC4A2-202ENST00000413384 P3H3Q8IVL6 736 aa22.42■■□□□ 1.18
SLC4A2-202ENST00000413384 SMARCA4P51532 1647 aa22.41■■□□□ 1.18
SLC4A2-202ENST00000413384 CEP164Q9UPV0 1460 aa22.39■■□□□ 1.17
SLC4A2-202ENST00000413384 ARID3CA6NKF2 412 aa22.38■■□□□ 1.17
SLC4A2-202ENST00000413384 FAM50AQ14320 339 aaKnown RBP22.37■■□□□ 1.17
SLC4A2-202ENST00000413384 RUSC2Q8N2Y8 1516 aa22.36■■□□□ 1.17
SLC4A2-202ENST00000413384 MIER1Q8N108 512 aa22.29■■□□□ 1.16
SLC4A2-202ENST00000413384 SMARCA2P51531 1590 aa22.28■■□□□ 1.16
SLC4A2-202ENST00000413384 VPS8Q8N3P4 1428 aa22.14■■□□□ 1.14
SLC4A2-202ENST00000413384 BCANQ96GW7 911 aa22.13■■□□□ 1.13
SLC4A2-202ENST00000413384 ATAD2BQ9ULI0 1458 aa22.13■■□□□ 1.13
SLC4A2-202ENST00000413384 POLR3GLQ9BT43 218 aa22.12■■□□□ 1.13
SLC4A2-202ENST00000413384 KIF27Q86VH2 1401 aa22.09■■□□□ 1.13
SLC4A2-202ENST00000413384 NEFLP07196 543 aa22.08■■□□□ 1.12
SLC4A2-202ENST00000413384 RAPGEF2Q9Y4G8 1499 aa22.05■■□□□ 1.12
SLC4A2-202ENST00000413384 KANK4Q5T7N3 995 aaPredicted RBP22.02■■□□□ 1.12
SLC4A2-202ENST00000413384 FBLN2P98095 1184 aa22.01■■□□□ 1.11
SLC4A2-202ENST00000413384 ERICH6Q7L0X2 663 aa21.92■■□□□ 1.1
SLC4A2-202ENST00000413384 TRIM52Q96A61 297 aa21.89■■□□□ 1.09
SLC4A2-202ENST00000413384 CLSPNQ9HAW4 1339 aa21.88■■□□□ 1.09
SLC4A2-202ENST00000413384 DDX10Q13206 875 aaKnown RBP21.87■■□□□ 1.09
SLC4A2-202ENST00000413384 CCNB3Q8WWL7 1395 aa21.85■■□□□ 1.09
SLC4A2-202ENST00000413384 SYNJ1O43426 1573 aa21.84■■□□□ 1.09
SLC4A2-202ENST00000413384 CUX2O14529 1486 aa21.83■■□□□ 1.09
SLC4A2-202ENST00000413384 ANP32CO43423 234 aa21.83■■□□□ 1.08
SLC4A2-202ENST00000413384 CARMIL1Q5VZK9 1371 aa21.8■■□□□ 1.08
SLC4A2-202ENST00000413384 HIRIP3Q9BW71 556 aaPredicted RBP21.79■■□□□ 1.08
SLC4A2-202ENST00000413384 MYT1LQ9UL68 1186 aa21.77■■□□□ 1.08
SLC4A2-202ENST00000413384 BICRAQ9NZM4 1560 aa21.75■■□□□ 1.07
SLC4A2-202ENST00000413384 EIF4G1Q04637 1599 aaKnown RBP21.74■■□□□ 1.07
SLC4A2-202ENST00000413384 SIN3AQ96ST3 1273 aa21.73■■□□□ 1.07
SLC4A2-202ENST00000413384 KIF21BO75037 1637 aa21.71■■□□□ 1.07
SLC4A2-202ENST00000413384 TONSLQ96HA7 1378 aa21.71■■□□□ 1.07
SLC4A2-202ENST00000413384 FKBP8Q14318 412 aa21.71■■□□□ 1.07
SLC4A2-202ENST00000413384 ZNF326Q5BKZ1 582 aaKnown RBP21.71■■□□□ 1.07
SLC4A2-202ENST00000413384 MTUS2Q5JR59 1369 aa21.7■■□□□ 1.06
SLC4A2-202ENST00000413384 DHX57Q6P158 1386 aaKnown RBP21.68■■□□□ 1.06
SLC4A2-202ENST00000413384 SUPT16HQ9Y5B9 1047 aaKnown RBP21.67■■□□□ 1.06
SLC4A2-202ENST00000413384 CHIC2Q9UKJ5 165 aa21.66■■□□□ 1.06
SLC4A2-202ENST00000413384 UNC13AQ9UPW8 1703 aa21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms