RNA–Protein interactions for RNA: ENST00000302946.12

SLFNL1-201, Transcript of schlafen like 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SLFNL1, Length 1,951 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLFNL1-201ENST00000302946 NISCHQ9Y2I1 1504 aa36.78■■■■□ 3.48
SLFNL1-201ENST00000302946 CCDC180Q9P1Z9 1646 aa32.23■■■□□ 2.75
SLFNL1-201ENST00000302946 ZCCHC6Q5VYS8 1495 aaKnown RBP30.88■■■□□ 2.53
SLFNL1-201ENST00000302946 DCAF1Q9Y4B6 1507 aa30.51■■■□□ 2.47
SLFNL1-201ENST00000302946 ABCC9O60706 1549 aa30.49■■■□□ 2.47
SLFNL1-201ENST00000302946 DCAF8L2P0C7V8 631 aa30.3■■■□□ 2.44
SLFNL1-201ENST00000302946 MYO15BQ96JP2 1530 aa30.24■■■□□ 2.43
SLFNL1-201ENST00000302946 NACADO15069 1562 aa30.06■■■□□ 2.4
SLFNL1-201ENST00000302946 RB1CC1Q8TDY2 1594 aa29.83■■■□□ 2.37
SLFNL1-201ENST00000302946 SHROOM4Q9ULL8 1493 aa29.73■■■□□ 2.35
SLFNL1-201ENST00000302946 SCRIBQ14160 1630 aa29.48■■■□□ 2.31
SLFNL1-201ENST00000302946 UNC13AQ9UPW8 1703 aa29.08■■■□□ 2.25
SLFNL1-201ENST00000302946 BICRAQ9NZM4 1560 aa28.83■■■□□ 2.21
SLFNL1-201ENST00000302946 SUPT5HO00267 1087 aaKnown RBP28.75■■■□□ 2.19
SLFNL1-201ENST00000302946 PABPN1Q86U42 306 aaKnown RBP eCLIP28.66■■■□□ 2.18
SLFNL1-201ENST00000302946 CECR2Q9BXF3 1484 aa28.5■■■□□ 2.15
SLFNL1-201ENST00000302946 BAZ1AQ9NRL2 1556 aaPredicted RBP28.46■■■□□ 2.15
SLFNL1-201ENST00000302946 RSF1Q96T23 1441 aaPredicted RBP28.43■■■□□ 2.14
SLFNL1-201ENST00000302946 MROH2BQ7Z745 1585 aa28.35■■■□□ 2.13
SLFNL1-201ENST00000302946 SMARCA4P51532 1647 aa28.3■■■□□ 2.12
SLFNL1-201ENST00000302946 WIZO95785 1651 aa28.08■■■□□ 2.09
SLFNL1-201ENST00000302946 PEG3Q9GZU2 1588 aa28.02■■■□□ 2.08
SLFNL1-201ENST00000302946 EIF4G1Q04637 1599 aaKnown RBP28.02■■■□□ 2.08
SLFNL1-201ENST00000302946 SMARCA2P51531 1590 aa27.93■■■□□ 2.06
SLFNL1-201ENST00000302946 CHIC1Q5VXU3 224 aa27.9■■■□□ 2.06
SLFNL1-201ENST00000302946 TOP2AP11388 1531 aaKnown RBP27.89■■■□□ 2.06
SLFNL1-201ENST00000302946 ATAD2BQ9ULI0 1458 aa27.89■■■□□ 2.06
SLFNL1-201ENST00000302946 BAZ1BQ9UIG0 1483 aaKnown RBP27.74■■■□□ 2.03
SLFNL1-201ENST00000302946 NCAPD3P42695 1498 aa27.71■■■□□ 2.03
SLFNL1-201ENST00000302946 HMGXB3Q12766 1538 aa27.69■■■□□ 2.02
SLFNL1-201ENST00000302946 CC2D2AQ9P2K1 1620 aa27.62■■■□□ 2.01
SLFNL1-201ENST00000302946 CCDC88BA6NC98 1476 aa27.54■■■□□ 2
SLFNL1-201ENST00000302946 CFTRP13569 1480 aa27.04■■□□□ 1.92
SLFNL1-201ENST00000302946 CADPSQ9ULU8 1353 aa26.98■■□□□ 1.91
SLFNL1-201ENST00000302946 DNAJC5BQ9UF47 199 aa26.95■■□□□ 1.9
SLFNL1-201ENST00000302946 TRIM41Q8WV44 630 aa26.93■■□□□ 1.9
SLFNL1-201ENST00000302946 LOC105371045A0A1W2PR82 267 aa26.91■■□□□ 1.9
SLFNL1-201ENST00000302946 PRDM2Q13029 1718 aa26.89■■□□□ 1.89
SLFNL1-201ENST00000302946 ABCC8Q09428 1581 aa26.86■■□□□ 1.89
SLFNL1-201ENST00000302946 LAMC3Q9Y6N6 1575 aa26.82■■□□□ 1.88
SLFNL1-201ENST00000302946 WRNQ14191 1432 aaPredicted RBP eCLIP26.81■■□□□ 1.88
SLFNL1-201ENST00000302946 NESP48681 1621 aa26.68■■□□□ 1.86
SLFNL1-201ENST00000302946 FANCD2Q9BXW9 1451 aa26.66■■□□□ 1.86
SLFNL1-201ENST00000302946 SYNJ1O43426 1573 aa26.64■■□□□ 1.85
SLFNL1-201ENST00000302946 PDS5BQ9NTI5 1447 aa26.62■■□□□ 1.85
SLFNL1-201ENST00000302946 TOP2BQ02880 1626 aa26.61■■□□□ 1.85
SLFNL1-201ENST00000302946 BIVM-ERCC5R4GMW8 1640 aa26.59■■□□□ 1.85
SLFNL1-201ENST00000302946 CEP164Q9UPV0 1460 aa26.53■■□□□ 1.84
SLFNL1-201ENST00000302946 CUX1P39880 1505 aa26.53■■□□□ 1.84
SLFNL1-201ENST00000302946 FAM9AQ8IZU1 332 aaPredicted RBP26.53■■□□□ 1.84
SLFNL1-201ENST00000302946 EEA1Q15075 1411 aa26.43■■□□□ 1.82
SLFNL1-201ENST00000302946 DNMBPQ6XZF7 1577 aa26.42■■□□□ 1.82
SLFNL1-201ENST00000302946 PCGF6Q9BYE7 350 aa26.42■■□□□ 1.82
SLFNL1-201ENST00000302946 KIF21AQ7Z4S6 1674 aa26.39■■□□□ 1.81
SLFNL1-201ENST00000302946 TOPBP1Q92547 1522 aa26.35■■□□□ 1.81
SLFNL1-201ENST00000302946 SOGA1O94964 1423 aa26.33■■□□□ 1.81
SLFNL1-201ENST00000302946 URB2Q14146 1524 aaKnown RBP26.3■■□□□ 1.8
SLFNL1-201ENST00000302946 FGD5Q6ZNL6 1462 aa26.29■■□□□ 1.8
SLFNL1-201ENST00000302946 MRC2Q9UBG0 1479 aa26.27■■□□□ 1.8
SLFNL1-201ENST00000302946 HRCP23327 699 aa26.24■■□□□ 1.79
SLFNL1-201ENST00000302946 ERCC6Q03468 1493 aa26.23■■□□□ 1.79
SLFNL1-201ENST00000302946 POLA1P09884 1462 aaPredicted RBP26.2■■□□□ 1.78
SLFNL1-201ENST00000302946 RUSC2Q8N2Y8 1516 aa26.19■■□□□ 1.78
SLFNL1-201ENST00000302946 EHMT2Q96KQ7 1210 aa26.18■■□□□ 1.78
SLFNL1-201ENST00000302946 CSRNP3Q8WYN3 585 aa26.18■■□□□ 1.78
SLFNL1-201ENST00000302946 KIF27Q86VH2 1401 aa26.17■■□□□ 1.78
SLFNL1-201ENST00000302946 TRIM26Q12899 539 aaPredicted RBP26.16■■□□□ 1.78
SLFNL1-201ENST00000302946 WDR62O43379 1518 aa26.13■■□□□ 1.77
SLFNL1-201ENST00000302946 ABCA10Q8WWZ4 1543 aa26.11■■□□□ 1.77
SLFNL1-201ENST00000302946 CUX2O14529 1486 aa26.09■■□□□ 1.77
SLFNL1-201ENST00000302946 THOC2Q8NI27 1593 aaKnown RBP26.06■■□□□ 1.76
SLFNL1-201ENST00000302946 RAD54L2Q9Y4B4 1467 aa26.05■■□□□ 1.76
SLFNL1-201ENST00000302946 KIF21BO75037 1637 aa26.02■■□□□ 1.76
SLFNL1-201ENST00000302946 WDR97A6NE52 1622 aa26■■□□□ 1.75
SLFNL1-201ENST00000302946 GOLGA3Q08378 1498 aa25.98■■□□□ 1.75
SLFNL1-201ENST00000302946 TARBP1Q13395 1621 aaKnown RBP25.95■■□□□ 1.74
SLFNL1-201ENST00000302946 IFT140Q96RY7 1462 aa25.94■■□□□ 1.74
SLFNL1-201ENST00000302946 PRXQ9BXM0 1461 aa25.92■■□□□ 1.74
SLFNL1-201ENST00000302946 ERICH3Q5RHP9 1530 aa25.9■■□□□ 1.74
SLFNL1-201ENST00000302946 IGF1RP08069 1367 aa25.9■■□□□ 1.74
SLFNL1-201ENST00000302946 TNIKQ9UKE5 1360 aa25.88■■□□□ 1.73
SLFNL1-201ENST00000302946 ABCA5Q8WWZ7 1642 aa25.88■■□□□ 1.73
SLFNL1-201ENST00000302946 CEP162Q5TB80 1403 aa25.85■■□□□ 1.73
SLFNL1-201ENST00000302946 GAPVD1Q14C86 1478 aa25.84■■□□□ 1.73
SLFNL1-201ENST00000302946 RAPGEF2Q9Y4G8 1499 aa25.83■■□□□ 1.72
SLFNL1-201ENST00000302946 TDRD9Q8NDG6 1382 aaKnown RBP25.82■■□□□ 1.72
SLFNL1-201ENST00000302946 UBTFP17480 764 aaKnown RBP25.8■■□□□ 1.72
SLFNL1-201ENST00000302946 CUL7Q14999 1698 aa25.79■■□□□ 1.72
SLFNL1-201ENST00000302946 CARMIL1Q5VZK9 1371 aa25.79■■□□□ 1.72
SLFNL1-201ENST00000302946 GRIN2BQ13224 1484 aa25.69■■□□□ 1.7
SLFNL1-201ENST00000302946 AQRO60306 1485 aaKnown RBP eCLIP25.69■■□□□ 1.7
SLFNL1-201ENST00000302946 PBRM1Q86U86 1689 aa25.68■■□□□ 1.7
SLFNL1-201ENST00000302946 ZNF608Q9ULD9 1512 aaPredicted RBP25.68■■□□□ 1.7
SLFNL1-201ENST00000302946 EIF4G3O43432 1585 aaKnown RBP25.65■■□□□ 1.7
SLFNL1-201ENST00000302946 PPARGC1BQ86YN6 1023 aaKnown RBP25.62■■□□□ 1.69
SLFNL1-201ENST00000302946 FHAD1B1AJZ9 1412 aa25.59■■□□□ 1.69
SLFNL1-201ENST00000302946 ADAMTS12P58397 1594 aa25.57■■□□□ 1.68
SLFNL1-201ENST00000302946 CLIP1P30622 1438 aa25.53■■□□□ 1.68
SLFNL1-201ENST00000302946 MAGI1Q96QZ7 1491 aaPredicted RBP25.52■■□□□ 1.68
SLFNL1-201ENST00000302946 SNAPC4Q5SXM2 1469 aa25.5■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 91.7 ms