RNA–Protein interactions for RNA: ENST00000637915.1

CTSD-213, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,982 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-213ENST00000637915 NISCHQ9Y2I1 1504 aa36.23■■■■□ 3.39
CTSD-213ENST00000637915 CCDC180Q9P1Z9 1646 aa31.28■■■□□ 2.6
CTSD-213ENST00000637915 ZCCHC6Q5VYS8 1495 aaKnown RBP30.56■■■□□ 2.48
CTSD-213ENST00000637915 SHROOM4Q9ULL8 1493 aa30.07■■■□□ 2.4
CTSD-213ENST00000637915 DCAF1Q9Y4B6 1507 aa29.89■■■□□ 2.38
CTSD-213ENST00000637915 DCAF8L2P0C7V8 631 aa29.81■■■□□ 2.36
CTSD-213ENST00000637915 MYO15BQ96JP2 1530 aa29.3■■■□□ 2.28
CTSD-213ENST00000637915 ABCC9O60706 1549 aa29.18■■■□□ 2.26
CTSD-213ENST00000637915 SUPT5HO00267 1087 aaKnown RBP29.18■■■□□ 2.26
CTSD-213ENST00000637915 NACADO15069 1562 aa28.99■■■□□ 2.23
CTSD-213ENST00000637915 SCRIBQ14160 1630 aa28.96■■■□□ 2.23
CTSD-213ENST00000637915 RB1CC1Q8TDY2 1594 aa28.63■■■□□ 2.17
CTSD-213ENST00000637915 RSF1Q96T23 1441 aaPredicted RBP28.35■■■□□ 2.13
CTSD-213ENST00000637915 CHIC1Q5VXU3 224 aa28.2■■■□□ 2.1
CTSD-213ENST00000637915 UNC13AQ9UPW8 1703 aa28.18■■■□□ 2.1
CTSD-213ENST00000637915 CECR2Q9BXF3 1484 aa28.17■■■□□ 2.1
CTSD-213ENST00000637915 MROH2BQ7Z745 1585 aa28.06■■■□□ 2.08
CTSD-213ENST00000637915 BAZ1AQ9NRL2 1556 aaPredicted RBP27.91■■■□□ 2.06
CTSD-213ENST00000637915 WIZO95785 1651 aa27.88■■■□□ 2.05
CTSD-213ENST00000637915 BICRAQ9NZM4 1560 aa27.83■■■□□ 2.05
CTSD-213ENST00000637915 SMARCA4P51532 1647 aa27.75■■■□□ 2.03
CTSD-213ENST00000637915 PABPN1Q86U42 306 aaKnown RBP eCLIP27.66■■■□□ 2.021e-12■□□□□ 10
CTSD-213ENST00000637915 TOP2AP11388 1531 aaKnown RBP27.54■■■□□ 2
CTSD-213ENST00000637915 EIF4G1Q04637 1599 aaKnown RBP27.36■■□□□ 1.97
CTSD-213ENST00000637915 PEG3Q9GZU2 1588 aa27.35■■□□□ 1.97
CTSD-213ENST00000637915 TRIM41Q8WV44 630 aa27.34■■□□□ 1.97
CTSD-213ENST00000637915 SMARCA2P51531 1590 aa27.33■■□□□ 1.97
CTSD-213ENST00000637915 CCDC88BA6NC98 1476 aa27.3■■□□□ 1.96
CTSD-213ENST00000637915 LOC105371045A0A1W2PR82 267 aa27.2■■□□□ 1.94
CTSD-213ENST00000637915 ATAD2BQ9ULI0 1458 aa27.14■■□□□ 1.93
CTSD-213ENST00000637915 BAZ1BQ9UIG0 1483 aaKnown RBP27.02■■□□□ 1.92
CTSD-213ENST00000637915 ABCC8Q09428 1581 aa26.97■■□□□ 1.91
CTSD-213ENST00000637915 FAM9AQ8IZU1 332 aaPredicted RBP26.93■■□□□ 1.9
CTSD-213ENST00000637915 HMGXB3Q12766 1538 aa26.79■■□□□ 1.88
CTSD-213ENST00000637915 NCAPD3P42695 1498 aa26.77■■□□□ 1.88
CTSD-213ENST00000637915 WRNQ14191 1432 aaPredicted RBP eCLIP26.65■■□□□ 1.86
CTSD-213ENST00000637915 EHMT2Q96KQ7 1210 aa26.59■■□□□ 1.85
CTSD-213ENST00000637915 SYNJ1O43426 1573 aa26.57■■□□□ 1.84
CTSD-213ENST00000637915 SOGA1O94964 1423 aa26.56■■□□□ 1.84
CTSD-213ENST00000637915 PCGF6Q9BYE7 350 aa26.54■■□□□ 1.84
CTSD-213ENST00000637915 EEA1Q15075 1411 aa26.5■■□□□ 1.83
CTSD-213ENST00000637915 RUSC2Q8N2Y8 1516 aa26.45■■□□□ 1.82
CTSD-213ENST00000637915 CC2D2AQ9P2K1 1620 aa26.4■■□□□ 1.82
CTSD-213ENST00000637915 TOP2BQ02880 1626 aa26.37■■□□□ 1.81
CTSD-213ENST00000637915 CFTRP13569 1480 aa26.36■■□□□ 1.81
CTSD-213ENST00000637915 CSRNP3Q8WYN3 585 aa26.35■■□□□ 1.81
CTSD-213ENST00000637915 BIVM-ERCC5R4GMW8 1640 aa26.33■■□□□ 1.81
CTSD-213ENST00000637915 TRIM26Q12899 539 aaPredicted RBP26.33■■□□□ 1.8
CTSD-213ENST00000637915 PRDM2Q13029 1718 aa26.27■■□□□ 1.8
CTSD-213ENST00000637915 TNIKQ9UKE5 1360 aa26.23■■□□□ 1.79
CTSD-213ENST00000637915 GOLGA3Q08378 1498 aa26.22■■□□□ 1.79
CTSD-213ENST00000637915 HRCP23327 699 aa26.2■■□□□ 1.78
CTSD-213ENST00000637915 CUX1P39880 1505 aa26.19■■□□□ 1.78
CTSD-213ENST00000637915 KIF21BO75037 1637 aa26.19■■□□□ 1.78
CTSD-213ENST00000637915 CEP162Q5TB80 1403 aa26.18■■□□□ 1.78
CTSD-213ENST00000637915 CEP164Q9UPV0 1460 aa26.15■■□□□ 1.78
CTSD-213ENST00000637915 CADPSQ9ULU8 1353 aa26.14■■□□□ 1.78
CTSD-213ENST00000637915 UBTFP17480 764 aaKnown RBP26.09■■□□□ 1.77
CTSD-213ENST00000637915 RAPGEF2Q9Y4G8 1499 aa25.98■■□□□ 1.75
CTSD-213ENST00000637915 PPARGC1BQ86YN6 1023 aaKnown RBP25.91■■□□□ 1.74
CTSD-213ENST00000637915 KIF27Q86VH2 1401 aa25.9■■□□□ 1.74
CTSD-213ENST00000637915 PRXQ9BXM0 1461 aa25.89■■□□□ 1.74
CTSD-213ENST00000637915 ERICH3Q5RHP9 1530 aa25.89■■□□□ 1.74
CTSD-213ENST00000637915 FANCD2Q9BXW9 1451 aa25.89■■□□□ 1.73
CTSD-213ENST00000637915 CLIP1P30622 1438 aa25.83■■□□□ 1.73
CTSD-213ENST00000637915 NESP48681 1621 aa25.82■■□□□ 1.72
CTSD-213ENST00000637915 FGD5Q6ZNL6 1462 aa25.81■■□□□ 1.72
CTSD-213ENST00000637915 LAMC3Q9Y6N6 1575 aa25.78■■□□□ 1.72
CTSD-213ENST00000637915 DNMBPQ6XZF7 1577 aa25.74■■□□□ 1.71
CTSD-213ENST00000637915 CUX2O14529 1486 aa25.74■■□□□ 1.71
CTSD-213ENST00000637915 VPS8Q8N3P4 1428 aa25.68■■□□□ 1.7
CTSD-213ENST00000637915 TOPBP1Q92547 1522 aa25.67■■□□□ 1.7
CTSD-213ENST00000637915 DNAJC5BQ9UF47 199 aa25.65■■□□□ 1.7
CTSD-213ENST00000637915 IGF1RP08069 1367 aa25.63■■□□□ 1.69
CTSD-213ENST00000637915 POLA1P09884 1462 aaPredicted RBP25.6■■□□□ 1.69
CTSD-213ENST00000637915 TTBK1Q5TCY1 1321 aaPredicted RBP25.6■■□□□ 1.69
CTSD-213ENST00000637915 RANGAP1P46060 587 aaPredicted RBP25.58■■□□□ 1.69
CTSD-213ENST00000637915 ABCA10Q8WWZ4 1543 aa25.56■■□□□ 1.68
CTSD-213ENST00000637915 URB2Q14146 1524 aaKnown RBP25.56■■□□□ 1.68
CTSD-213ENST00000637915 RAD54L2Q9Y4B4 1467 aa25.55■■□□□ 1.68
CTSD-213ENST00000637915 PDS5BQ9NTI5 1447 aa25.54■■□□□ 1.68
CTSD-213ENST00000637915 ARAP1Q96P48 1450 aa25.54■■□□□ 1.68
CTSD-213ENST00000637915 CARMIL1Q5VZK9 1371 aa25.51■■□□□ 1.67
CTSD-213ENST00000637915 KIF21AQ7Z4S6 1674 aa25.5■■□□□ 1.67
CTSD-213ENST00000637915 ZEB1P37275 1124 aaPredicted RBP25.5■■□□□ 1.67
CTSD-213ENST00000637915 WDR97A6NE52 1622 aa25.46■■□□□ 1.67
CTSD-213ENST00000637915 ARHGAP35Q9NRY4 1499 aa25.42■■□□□ 1.66
CTSD-213ENST00000637915 APLP2Q06481 763 aa25.4■■□□□ 1.66
CTSD-213ENST00000637915 CUL7Q14999 1698 aa25.37■■□□□ 1.65
CTSD-213ENST00000637915 ABCA5Q8WWZ7 1642 aa25.33■■□□□ 1.65
CTSD-213ENST00000637915 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.29■■□□□ 1.64
CTSD-213ENST00000637915 TARBP1Q13395 1621 aaKnown RBP25.26■■□□□ 1.63
CTSD-213ENST00000637915 TDRD9Q8NDG6 1382 aaKnown RBP25.24■■□□□ 1.63
CTSD-213ENST00000637915 GAPVD1Q14C86 1478 aa25.23■■□□□ 1.63
CTSD-213ENST00000637915 CCER1Q8TC90 406 aaPredicted RBP25.22■■□□□ 1.63
CTSD-213ENST00000637915 MRC2Q9UBG0 1479 aa25.21■■□□□ 1.63
CTSD-213ENST00000637915 CTTNBP2Q8WZ74 1663 aa25.21■■□□□ 1.63
CTSD-213ENST00000637915 KANK4Q5T7N3 995 aaPredicted RBP25.16■■□□□ 1.62
CTSD-213ENST00000637915 EFCAB5A4FU69 1503 aa25.12■■□□□ 1.61
CTSD-213ENST00000637915 MAP3K1Q13233 1512 aa25.09■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms