RNA–Protein interactions for RNA: ENST00000616058.4

SUCO-210, Transcript of SUN domain containing ossification factor, humanhuman

TSL 1 (best) BASIC

Gene SUCO, Length 5,495 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUCO-210ENST00000616058 NISCHQ9Y2I1 1504 aa27.19■■□□□ 1.94
SUCO-210ENST00000616058 DCAF8L2P0C7V8 631 aa26.79■■□□□ 1.88
SUCO-210ENST00000616058 SUPT5HO00267 1087 aaKnown RBP25.9■■□□□ 1.74
SUCO-210ENST00000616058 SHROOM4Q9ULL8 1493 aa25.73■■□□□ 1.71
SUCO-210ENST00000616058 EHMT2Q96KQ7 1210 aa24.78■■□□□ 1.56
SUCO-210ENST00000616058 FAM9AQ8IZU1 332 aaPredicted RBP24.33■■□□□ 1.48
SUCO-210ENST00000616058 PCGF6Q9BYE7 350 aa24.22■■□□□ 1.47
SUCO-210ENST00000616058 TTBK1Q5TCY1 1321 aaPredicted RBP23.93■■□□□ 1.42
SUCO-210ENST00000616058 TRIM41Q8WV44 630 aa23.92■■□□□ 1.42
SUCO-210ENST00000616058 APLP2Q06481 763 aa23.78■■□□□ 1.4
SUCO-210ENST00000616058 RANGAP1P46060 587 aaPredicted RBP23.6■■□□□ 1.37
SUCO-210ENST00000616058 CHIC1Q5VXU3 224 aa23.54■■□□□ 1.36
SUCO-210ENST00000616058 LOC105371045A0A1W2PR82 267 aa23.43■■□□□ 1.34
SUCO-210ENST00000616058 CCER1Q8TC90 406 aaPredicted RBP23.42■■□□□ 1.34
SUCO-210ENST00000616058 UBTFP17480 764 aaKnown RBP23.41■■□□□ 1.34
SUCO-210ENST00000616058 PPARGC1BQ86YN6 1023 aaKnown RBP23.41■■□□□ 1.34
SUCO-210ENST00000616058 ZEB1P37275 1124 aaPredicted RBP23.39■■□□□ 1.33
SUCO-210ENST00000616058 TRIM26Q12899 539 aaPredicted RBP23.23■■□□□ 1.31
SUCO-210ENST00000616058 HRCP23327 699 aa23.21■■□□□ 1.31
SUCO-210ENST00000616058 ATP1B4Q9UN42 357 aaPredicted RBP23.11■■□□□ 1.29
SUCO-210ENST00000616058 PELP1Q8IZL8 1130 aaKnown RBP23.08■■□□□ 1.29
SUCO-210ENST00000616058 CENPBP07199 599 aaPredicted RBP23.02■■□□□ 1.27
SUCO-210ENST00000616058 ABCC9O60706 1549 aa22.92■■□□□ 1.26
SUCO-210ENST00000616058 YTHDC1Q96MU7 727 aaKnown RBP22.83■■□□□ 1.24
SUCO-210ENST00000616058 PABPN1Q86U42 306 aaKnown RBP eCLIP22.7■■□□□ 1.22
SUCO-210ENST00000616058 HNRNPUL2Q1KMD3 747 aaKnown RBP22.69■■□□□ 1.22
SUCO-210ENST00000616058 ITGAEP38570 1179 aa22.65■■□□□ 1.22
SUCO-210ENST00000616058 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.64■■□□□ 1.21
SUCO-210ENST00000616058 ZCCHC6Q5VYS8 1495 aaKnown RBP22.63■■□□□ 1.21
SUCO-210ENST00000616058 SCRIBQ14160 1630 aa22.3■■□□□ 1.16
SUCO-210ENST00000616058 NEFLP07196 543 aa22.29■■□□□ 1.16
SUCO-210ENST00000616058 DIEXFQ68CQ4 756 aaKnown RBP22.28■■□□□ 1.16
SUCO-210ENST00000616058 CCDC180Q9P1Z9 1646 aa22.23■■□□□ 1.15
SUCO-210ENST00000616058 ERICH6Q7L0X2 663 aa22.17■■□□□ 1.14
SUCO-210ENST00000616058 CSRNP3Q8WYN3 585 aa22.13■■□□□ 1.13
SUCO-210ENST00000616058 FAM50AQ14320 339 aaKnown RBP22.09■■□□□ 1.13
SUCO-210ENST00000616058 MYO15BQ96JP2 1530 aa22.05■■□□□ 1.12
SUCO-210ENST00000616058 POLR3GLQ9BT43 218 aa22.05■■□□□ 1.12
SUCO-210ENST00000616058 DCAF1Q9Y4B6 1507 aa22.01■■□□□ 1.11
SUCO-210ENST00000616058 CNGB1Q14028 1251 aaPredicted RBP21.99■■□□□ 1.11
SUCO-210ENST00000616058 NEUROD1Q13562 356 aa21.93■■□□□ 1.1
SUCO-210ENST00000616058 RSF1Q96T23 1441 aaPredicted RBP21.85■■□□□ 1.09
SUCO-210ENST00000616058 P3H3Q8IVL6 736 aa21.85■■□□□ 1.09
SUCO-210ENST00000616058 ZNF316A6NFI3 1004 aaPredicted RBP21.84■■□□□ 1.09
SUCO-210ENST00000616058 MYT1LQ9UL68 1186 aa21.83■■□□□ 1.09
SUCO-210ENST00000616058 GTF3C3Q9Y5Q9 886 aa21.82■■□□□ 1.08
SUCO-210ENST00000616058 TRIM52Q96A61 297 aa21.8■■□□□ 1.08
SUCO-210ENST00000616058 ARID3CA6NKF2 412 aa21.64■■□□□ 1.06
SUCO-210ENST00000616058 ACIN1Q9UKV3 1341 aaKnown RBP21.62■■□□□ 1.05
SUCO-210ENST00000616058 MYT1Q01538 1121 aa21.62■■□□□ 1.05
SUCO-210ENST00000616058 FBLN2P98095 1184 aa21.59■■□□□ 1.05
SUCO-210ENST00000616058 BCANQ96GW7 911 aa21.58■■□□□ 1.05
SUCO-210ENST00000616058 ZNF326Q5BKZ1 582 aaKnown RBP21.54■■□□□ 1.04
SUCO-210ENST00000616058 ANP32CO43423 234 aa21.53■■□□□ 1.04
SUCO-210ENST00000616058 RB1CC1Q8TDY2 1594 aa21.51■■□□□ 1.03
SUCO-210ENST00000616058 CECR2Q9BXF3 1484 aa21.46■■□□□ 1.03
SUCO-210ENST00000616058 NACADO15069 1562 aa21.45■■□□□ 1.02
SUCO-210ENST00000616058 CLIP1P30622 1438 aa21.42■■□□□ 1.02
SUCO-210ENST00000616058 CEP162Q5TB80 1403 aa21.41■■□□□ 1.02
SUCO-210ENST00000616058 SLC4A1APQ9BWU0 796 aaKnown RBP21.38■■□□□ 1.01
SUCO-210ENST00000616058 ZNF777Q9ULD5 760 aaPredicted RBP21.33■■□□□ 1.01
SUCO-210ENST00000616058 WRNQ14191 1432 aaPredicted RBP eCLIP21.33■■□□□ 1
SUCO-210ENST00000616058 DAXXQ9UER7 740 aaPredicted RBP21.3■■□□□ 1
SUCO-210ENST00000616058 GOLGA3Q08378 1498 aa21.3■■□□□ 1
SUCO-210ENST00000616058 EEA1Q15075 1411 aa21.29■■□□□ 1
SUCO-210ENST00000616058 DDX10Q13206 875 aaKnown RBP21.26■□□□□ 0.99
SUCO-210ENST00000616058 TONSLQ96HA7 1378 aa21.24■□□□□ 0.99
SUCO-210ENST00000616058 BAZ1AQ9NRL2 1556 aaPredicted RBP21.23■□□□□ 0.99
SUCO-210ENST00000616058 TNIKQ9UKE5 1360 aa21.22■□□□□ 0.99
SUCO-210ENST00000616058 MIER1Q8N108 512 aa21.22■□□□□ 0.99
SUCO-210ENST00000616058 CHIC2Q9UKJ5 165 aa21.22■□□□□ 0.99
SUCO-210ENST00000616058 SCAF1Q9H7N4 1312 aaKnown RBP21.2■□□□□ 0.98
SUCO-210ENST00000616058 BAZ1BQ9UIG0 1483 aaKnown RBP21.2■□□□□ 0.98
SUCO-210ENST00000616058 CDK11AQ9UQ88 783 aaPredicted RBP21.18■□□□□ 0.98
SUCO-210ENST00000616058 MROH2BQ7Z745 1585 aa21.18■□□□□ 0.98
SUCO-210ENST00000616058 SOGA1O94964 1423 aa21.14■□□□□ 0.98
SUCO-210ENST00000616058 HIRIP3Q9BW71 556 aaPredicted RBP21.11■□□□□ 0.97
SUCO-210ENST00000616058 MTUS2Q5JR59 1369 aa21.1■□□□□ 0.97
SUCO-210ENST00000616058 CEP164Q9UPV0 1460 aa21.1■□□□□ 0.97
SUCO-210ENST00000616058 CLSPNQ9HAW4 1339 aa21.09■□□□□ 0.97
SUCO-210ENST00000616058 FKBP8Q14318 412 aa21.08■□□□□ 0.97
SUCO-210ENST00000616058 HNRNPUQ00839 825 aaKnown RBP eCLIP21.03■□□□□ 0.96
SUCO-210ENST00000616058 KIF27Q86VH2 1401 aa21.02■□□□□ 0.96
SUCO-210ENST00000616058 ABCC8Q09428 1581 aa21.01■□□□□ 0.95
SUCO-210ENST00000616058 CCDC88BA6NC98 1476 aa21■□□□□ 0.95
SUCO-210ENST00000616058 RTL5Q5HYW3 569 aaPredicted RBP21■□□□□ 0.95
SUCO-210ENST00000616058 FAM9BQ8IZU0 186 aa20.98■□□□□ 0.95
SUCO-210ENST00000616058 RRP7BPQ9NSQ0 103 aa20.97■□□□□ 0.95
SUCO-210ENST00000616058 WIZO95785 1651 aa20.89■□□□□ 0.93
SUCO-210ENST00000616058 CHMP7Q8WUX9 453 aaPredicted RBP20.86■□□□□ 0.93
SUCO-210ENST00000616058 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.85■□□□□ 0.933e-6■■□□□ 13.8
SUCO-210ENST00000616058 KDM2AQ9Y2K7 1162 aa20.83■□□□□ 0.92
SUCO-210ENST00000616058 SIN3AQ96ST3 1273 aa20.82■□□□□ 0.92
SUCO-210ENST00000616058 SALL2Q9Y467 1007 aaPredicted RBP20.82■□□□□ 0.92
SUCO-210ENST00000616058 TSPY4P0CV99 314 aa20.81■□□□□ 0.92
SUCO-210ENST00000616058 TSPY10P0CW01 314 aa20.81■□□□□ 0.92
SUCO-210ENST00000616058 MRS2Q9HD23 443 aa20.8■□□□□ 0.92
SUCO-210ENST00000616058 CANXP27824 592 aaKnown RBP20.77■□□□□ 0.92
SUCO-210ENST00000616058 EIF4G2P78344 907 aaKnown RBP eCLIP20.77■□□□□ 0.918e-7■■■□□ 16.1
SUCO-210ENST00000616058 VPS8Q8N3P4 1428 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms