RNA–Protein interactions for RNA: ENST00000589677.5

SMARCA4-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,181 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-214ENST00000589677 NISCHQ9Y2I1 1504 aa24.17■■□□□ 1.46
SMARCA4-214ENST00000589677 DCAF8L2P0C7V8 631 aa23.76■■□□□ 1.39
SMARCA4-214ENST00000589677 PELP1Q8IZL8 1130 aaKnown RBP23.56■■□□□ 1.36
SMARCA4-214ENST00000589677 SUPT5HO00267 1087 aaKnown RBP23.5■■□□□ 1.35
SMARCA4-214ENST00000589677 MYT1Q01538 1121 aa23.28■■□□□ 1.32
SMARCA4-214ENST00000589677 PCGF6Q9BYE7 350 aa22.88■■□□□ 1.25
SMARCA4-214ENST00000589677 CENPBP07199 599 aaPredicted RBP22.85■■□□□ 1.25
SMARCA4-214ENST00000589677 ZEB1P37275 1124 aaPredicted RBP22.82■■□□□ 1.24
SMARCA4-214ENST00000589677 SHROOM4Q9ULL8 1493 aa22.81■■□□□ 1.24
SMARCA4-214ENST00000589677 EHMT2Q96KQ7 1210 aa22.47■■□□□ 1.19
SMARCA4-214ENST00000589677 ERICH6Q7L0X2 663 aa22.47■■□□□ 1.19
SMARCA4-214ENST00000589677 CCER1Q8TC90 406 aaPredicted RBP22.42■■□□□ 1.18
SMARCA4-214ENST00000589677 APLP2Q06481 763 aa22.33■■□□□ 1.17
SMARCA4-214ENST00000589677 HRCP23327 699 aa22.31■■□□□ 1.16
SMARCA4-214ENST00000589677 FAM9AQ8IZU1 332 aaPredicted RBP22.08■■□□□ 1.13
SMARCA4-214ENST00000589677 NEFLP07196 543 aa21.98■■□□□ 1.11
SMARCA4-214ENST00000589677 TRIM26Q12899 539 aaPredicted RBP21.97■■□□□ 1.11
SMARCA4-214ENST00000589677 YTHDC1Q96MU7 727 aaKnown RBP21.94■■□□□ 1.1
SMARCA4-214ENST00000589677 TTBK1Q5TCY1 1321 aaPredicted RBP21.91■■□□□ 1.1
SMARCA4-214ENST00000589677 TRIM41Q8WV44 630 aa21.82■■□□□ 1.08
SMARCA4-214ENST00000589677 PPARGC1BQ86YN6 1023 aaKnown RBP21.59■■□□□ 1.05
SMARCA4-214ENST00000589677 UBTFP17480 764 aaKnown RBP21.39■■□□□ 1.02
SMARCA4-214ENST00000589677 DIEXFQ68CQ4 756 aaKnown RBP21.35■■□□□ 1.01
SMARCA4-214ENST00000589677 CHIC1Q5VXU3 224 aa21.35■■□□□ 1.01
SMARCA4-214ENST00000589677 RANGAP1P46060 587 aaPredicted RBP21.27■■□□□ 1
SMARCA4-214ENST00000589677 GTF3C3Q9Y5Q9 886 aa21.27■■□□□ 1
SMARCA4-214ENST00000589677 DAXXQ9UER7 740 aaPredicted RBP21.23■□□□□ 0.99
SMARCA4-214ENST00000589677 LOC105371045A0A1W2PR82 267 aa21.23■□□□□ 0.99
SMARCA4-214ENST00000589677 RTL5Q5HYW3 569 aaPredicted RBP21.16■□□□□ 0.98
SMARCA4-214ENST00000589677 ACIN1Q9UKV3 1341 aaKnown RBP21.09■□□□□ 0.97
SMARCA4-214ENST00000589677 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.04■□□□□ 0.96
SMARCA4-214ENST00000589677 ATP1B4Q9UN42 357 aaPredicted RBP21.04■□□□□ 0.96
SMARCA4-214ENST00000589677 HNRNPUL2Q1KMD3 747 aaKnown RBP20.92■□□□□ 0.94
SMARCA4-214ENST00000589677 ZNF316A6NFI3 1004 aaPredicted RBP20.79■□□□□ 0.92
SMARCA4-214ENST00000589677 CDK11AQ9UQ88 783 aaPredicted RBP20.79■□□□□ 0.92
SMARCA4-214ENST00000589677 CLSPNQ9HAW4 1339 aa20.78■□□□□ 0.92
SMARCA4-214ENST00000589677 BCANQ96GW7 911 aa20.74■□□□□ 0.91
SMARCA4-214ENST00000589677 ITGAEP38570 1179 aa20.73■□□□□ 0.91
SMARCA4-214ENST00000589677 MYT1LQ9UL68 1186 aa20.6■□□□□ 0.89
SMARCA4-214ENST00000589677 POLR3GLQ9BT43 218 aa20.6■□□□□ 0.89
SMARCA4-214ENST00000589677 SCAF1Q9H7N4 1312 aaKnown RBP20.58■□□□□ 0.89
SMARCA4-214ENST00000589677 ANP32CO43423 234 aa20.54■□□□□ 0.88
SMARCA4-214ENST00000589677 ABCC9O60706 1549 aa20.51■□□□□ 0.87
SMARCA4-214ENST00000589677 NEUROD1Q13562 356 aa20.48■□□□□ 0.87
SMARCA4-214ENST00000589677 DCAF1Q9Y4B6 1507 aa20.48■□□□□ 0.87
SMARCA4-214ENST00000589677 ANP32AP39687 249 aaKnown RBP20.43■□□□□ 0.86
SMARCA4-214ENST00000589677 CNGB1Q14028 1251 aaPredicted RBP20.39■□□□□ 0.85
SMARCA4-214ENST00000589677 FKBP8Q14318 412 aa20.3■□□□□ 0.84
SMARCA4-214ENST00000589677 GLIPR1L2Q4G1C9 344 aa20.29■□□□□ 0.84
SMARCA4-214ENST00000589677 EIF5BO60841 1220 aaKnown RBP20.29■□□□□ 0.84
SMARCA4-214ENST00000589677 FAM50AQ14320 339 aaKnown RBP20.21■□□□□ 0.83
SMARCA4-214ENST00000589677 PABPN1Q86U42 306 aaKnown RBP eCLIP20.18■□□□□ 0.82
SMARCA4-214ENST00000589677 ANP32EQ9BTT0 268 aa20.18■□□□□ 0.82
SMARCA4-214ENST00000589677 ZCCHC6Q5VYS8 1495 aaKnown RBP20.08■□□□□ 0.81
SMARCA4-214ENST00000589677 CCDC180Q9P1Z9 1646 aa20.08■□□□□ 0.8
SMARCA4-214ENST00000589677 TRIM52Q96A61 297 aa20.07■□□□□ 0.8
SMARCA4-214ENST00000589677 NPM2Q86SE8 214 aaKnown RBP20.06■□□□□ 0.8
SMARCA4-214ENST00000589677 ZBTB47Q9UFB7 747 aaPredicted RBP20.03■□□□□ 0.8
SMARCA4-214ENST00000589677 NBR1Q14596 966 aa19.99■□□□□ 0.79
SMARCA4-214ENST00000589677 MIER1Q8N108 512 aa19.99■□□□□ 0.79
SMARCA4-214ENST00000589677 ANP32BQ92688 251 aaKnown RBP19.94■□□□□ 0.78
SMARCA4-214ENST00000589677 HNRNPUQ00839 825 aaKnown RBP eCLIP19.94■□□□□ 0.78
SMARCA4-214ENST00000589677 SLC4A1APQ9BWU0 796 aaKnown RBP19.9■□□□□ 0.78
SMARCA4-214ENST00000589677 CANXP27824 592 aaKnown RBP19.88■□□□□ 0.77
SMARCA4-214ENST00000589677 CSRNP3Q8WYN3 585 aa19.88■□□□□ 0.77
SMARCA4-214ENST00000589677 DDX10Q13206 875 aaKnown RBP19.86■□□□□ 0.77
SMARCA4-214ENST00000589677 BCL11AQ9H165 835 aa19.84■□□□□ 0.77
SMARCA4-214ENST00000589677 CCDC136Q96JN2 1154 aa19.84■□□□□ 0.77
SMARCA4-214ENST00000589677 ZNF326Q5BKZ1 582 aaKnown RBP19.81■□□□□ 0.76
SMARCA4-214ENST00000589677 SCRIBQ14160 1630 aa19.8■□□□□ 0.76
SMARCA4-214ENST00000589677 UPF2Q9HAU5 1272 aaKnown RBP19.78■□□□□ 0.76
SMARCA4-214ENST00000589677 TONSLQ96HA7 1378 aa19.75■□□□□ 0.75
SMARCA4-214ENST00000589677 FAM9BQ8IZU0 186 aa19.72■□□□□ 0.75
SMARCA4-214ENST00000589677 DDRGK1Q96HY6 314 aa19.68■□□□□ 0.74
SMARCA4-214ENST00000589677 MYO15BQ96JP2 1530 aa19.67■□□□□ 0.74
SMARCA4-214ENST00000589677 HSP90AA1P07900 732 aaKnown RBP19.65■□□□□ 0.74
SMARCA4-214ENST00000589677 SUPT16HQ9Y5B9 1047 aaKnown RBP19.64■□□□□ 0.74
SMARCA4-214ENST00000589677 PPM1GO15355 546 aaPredicted RBP19.6■□□□□ 0.73
SMARCA4-214ENST00000589677 IRX6P78412 446 aaPredicted RBP19.59■□□□□ 0.73
SMARCA4-214ENST00000589677 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.58■□□□□ 0.72
SMARCA4-214ENST00000589677 ERICH6BQ5W0A0 696 aa19.58■□□□□ 0.72
SMARCA4-214ENST00000589677 MRS2Q9HD23 443 aa19.56■□□□□ 0.72
SMARCA4-214ENST00000589677 NEFMP07197 916 aa19.54■□□□□ 0.72
SMARCA4-214ENST00000589677 TMC1Q8TDI8 760 aa19.53■□□□□ 0.72
SMARCA4-214ENST00000589677 NOP58Q9Y2X3 529 aaKnown RBP19.53■□□□□ 0.72
SMARCA4-214ENST00000589677 RB1CC1Q8TDY2 1594 aa19.49■□□□□ 0.71
SMARCA4-214ENST00000589677 BECN1Q14457 450 aa19.48■□□□□ 0.71
SMARCA4-214ENST00000589677 PPP4R2Q9NY27 417 aa19.48■□□□□ 0.71
SMARCA4-214ENST00000589677 ARXQ96QS3 562 aa19.47■□□□□ 0.71
SMARCA4-214ENST00000589677 TRIM44Q96DX7 344 aaPredicted RBP19.47■□□□□ 0.71
SMARCA4-214ENST00000589677 DEKP35659 375 aaKnown RBP19.46■□□□□ 0.71
SMARCA4-214ENST00000589677 TNNT2P45379 298 aaPredicted RBP19.42■□□□□ 0.7
SMARCA4-214ENST00000589677 RBM19Q9Y4C8 960 aaKnown RBP19.41■□□□□ 0.7
SMARCA4-214ENST00000589677 NACADO15069 1562 aa19.4■□□□□ 0.7
SMARCA4-214ENST00000589677 RTN4Q9NQC3 1192 aaKnown RBP19.4■□□□□ 0.7
SMARCA4-214ENST00000589677 SALL2Q9Y467 1007 aaPredicted RBP19.38■□□□□ 0.69
SMARCA4-214ENST00000589677 P3H3Q8IVL6 736 aa19.36■□□□□ 0.69
SMARCA4-214ENST00000589677 EIF4G2P78344 907 aaKnown RBP eCLIP19.34■□□□□ 0.69
SMARCA4-214ENST00000589677 NAP1L5Q96NT1 182 aaPredicted RBP19.33■□□□□ 0.69
SMARCA4-214ENST00000589677 FBLN2P98095 1184 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms