RNA–Protein interactions for RNA: ENST00000396634.5

HLA-A-204, Transcript of major histocompatibility complex, class I, A, humanhuman

APPRIS P1 BASIC

Gene HLA-A, Length 1,868 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-204ENST00000396634 NISCHQ9Y2I1 1504 aa41.05■■■■■ 4.16
HLA-A-204ENST00000396634 CCDC180Q9P1Z9 1646 aa36.24■■■■□ 3.39
HLA-A-204ENST00000396634 ABCC9O60706 1549 aa35.23■■■■□ 3.23
HLA-A-204ENST00000396634 ZCCHC6Q5VYS8 1495 aaKnown RBP34.29■■■■□ 3.08
HLA-A-204ENST00000396634 DCAF8L2P0C7V8 631 aa34.28■■■■□ 3.08
HLA-A-204ENST00000396634 NACADO15069 1562 aa33.93■■■■□ 3.02
HLA-A-204ENST00000396634 RB1CC1Q8TDY2 1594 aa33.91■■■■□ 3.02
HLA-A-204ENST00000396634 DCAF1Q9Y4B6 1507 aa33.84■■■■□ 3.01
HLA-A-204ENST00000396634 MYO15BQ96JP2 1530 aa33.76■■■■□ 3
HLA-A-204ENST00000396634 UNC13AQ9UPW8 1703 aa33.35■■■□□ 2.93
HLA-A-204ENST00000396634 SCRIBQ14160 1630 aa33.31■■■□□ 2.92
HLA-A-204ENST00000396634 PABPN1Q86U42 306 aaKnown RBP eCLIP33.01■■■□□ 2.88
HLA-A-204ENST00000396634 BICRAQ9NZM4 1560 aa32.97■■■□□ 2.87
HLA-A-204ENST00000396634 SHROOM4Q9ULL8 1493 aa32.96■■■□□ 2.87
HLA-A-204ENST00000396634 CECR2Q9BXF3 1484 aa32.05■■■□□ 2.72
HLA-A-204ENST00000396634 EIF4G1Q04637 1599 aaKnown RBP32.04■■■□□ 2.72
HLA-A-204ENST00000396634 DNAJC5BQ9UF47 199 aa31.95■■■□□ 2.7
HLA-A-204ENST00000396634 CC2D2AQ9P2K1 1620 aa31.83■■■□□ 2.69
HLA-A-204ENST00000396634 SMARCA4P51532 1647 aa31.8■■■□□ 2.68
HLA-A-204ENST00000396634 BAZ1AQ9NRL2 1556 aaPredicted RBP31.75■■■□□ 2.67
HLA-A-204ENST00000396634 MROH2BQ7Z745 1585 aa31.74■■■□□ 2.67
HLA-A-204ENST00000396634 RSF1Q96T23 1441 aaPredicted RBP31.47■■■□□ 2.63
HLA-A-204ENST00000396634 WIZO95785 1651 aa31.47■■■□□ 2.63
HLA-A-204ENST00000396634 ATAD2BQ9ULI0 1458 aa31.47■■■□□ 2.63
HLA-A-204ENST00000396634 SMARCA2P51531 1590 aa31.4■■■□□ 2.62
HLA-A-204ENST00000396634 PEG3Q9GZU2 1588 aa31.37■■■□□ 2.61
HLA-A-204ENST00000396634 NCAPD3P42695 1498 aa31.31■■■□□ 2.6
HLA-A-204ENST00000396634 BAZ1BQ9UIG0 1483 aaKnown RBP31.25■■■□□ 2.59
HLA-A-204ENST00000396634 HMGXB3Q12766 1538 aa31.22■■■□□ 2.59
HLA-A-204ENST00000396634 SUPT5HO00267 1087 aaKnown RBP31.17■■■□□ 2.58
HLA-A-204ENST00000396634 TOP2AP11388 1531 aaKnown RBP31.03■■■□□ 2.56
HLA-A-204ENST00000396634 CCDC88BA6NC98 1476 aa30.71■■■□□ 2.51
HLA-A-204ENST00000396634 NESP48681 1621 aa30.65■■■□□ 2.5
HLA-A-204ENST00000396634 CADPSQ9ULU8 1353 aa30.46■■■□□ 2.47
HLA-A-204ENST00000396634 LAMC3Q9Y6N6 1575 aa30.44■■■□□ 2.46
HLA-A-204ENST00000396634 CFTRP13569 1480 aa30.38■■■□□ 2.45
HLA-A-204ENST00000396634 KIF21AQ7Z4S6 1674 aa30.29■■■□□ 2.44
HLA-A-204ENST00000396634 PRDM2Q13029 1718 aa30.26■■■□□ 2.43
HLA-A-204ENST00000396634 ERCC6Q03468 1493 aa30.25■■■□□ 2.43
HLA-A-204ENST00000396634 PDS5BQ9NTI5 1447 aa30.19■■■□□ 2.42
HLA-A-204ENST00000396634 FANCD2Q9BXW9 1451 aa30.17■■■□□ 2.42
HLA-A-204ENST00000396634 CEP164Q9UPV0 1460 aa30.07■■■□□ 2.4
HLA-A-204ENST00000396634 THOC2Q8NI27 1593 aaKnown RBP30■■■□□ 2.39
HLA-A-204ENST00000396634 MRC2Q9UBG0 1479 aa29.91■■■□□ 2.38
HLA-A-204ENST00000396634 URB2Q14146 1524 aaKnown RBP29.89■■■□□ 2.38
HLA-A-204ENST00000396634 ABCC8Q09428 1581 aa29.86■■■□□ 2.37
HLA-A-204ENST00000396634 WDR62O43379 1518 aa29.81■■■□□ 2.36
HLA-A-204ENST00000396634 TOPBP1Q92547 1522 aa29.75■■■□□ 2.35
HLA-A-204ENST00000396634 CUX1P39880 1505 aa29.74■■■□□ 2.35
HLA-A-204ENST00000396634 DNMBPQ6XZF7 1577 aa29.72■■■□□ 2.35
HLA-A-204ENST00000396634 SYNJ1O43426 1573 aa29.66■■■□□ 2.34
HLA-A-204ENST00000396634 WRNQ14191 1432 aaPredicted RBP eCLIP29.65■■■□□ 2.34
HLA-A-204ENST00000396634 CUX2O14529 1486 aa29.63■■■□□ 2.33
HLA-A-204ENST00000396634 FGD5Q6ZNL6 1462 aa29.55■■■□□ 2.32
HLA-A-204ENST00000396634 TOP2BQ02880 1626 aa29.54■■■□□ 2.32
HLA-A-204ENST00000396634 BIVM-ERCC5R4GMW8 1640 aa29.54■■■□□ 2.32
HLA-A-204ENST00000396634 POLA1P09884 1462 aaPredicted RBP29.54■■■□□ 2.32
HLA-A-204ENST00000396634 RAD54L2Q9Y4B4 1467 aa29.47■■■□□ 2.31
HLA-A-204ENST00000396634 TARBP1Q13395 1621 aaKnown RBP29.4■■■□□ 2.3
HLA-A-204ENST00000396634 SOGA1O94964 1423 aa29.38■■■□□ 2.29
HLA-A-204ENST00000396634 IFT140Q96RY7 1462 aa29.36■■■□□ 2.29
HLA-A-204ENST00000396634 ZNF608Q9ULD9 1512 aaPredicted RBP29.36■■■□□ 2.29
HLA-A-204ENST00000396634 WDR97A6NE52 1622 aa29.29■■■□□ 2.28
HLA-A-204ENST00000396634 TRIM41Q8WV44 630 aa29.29■■■□□ 2.28
HLA-A-204ENST00000396634 CHIC1Q5VXU3 224 aa29.26■■■□□ 2.27
HLA-A-204ENST00000396634 TDRD9Q8NDG6 1382 aaKnown RBP29.24■■■□□ 2.27
HLA-A-204ENST00000396634 EIF4G3O43432 1585 aaKnown RBP29.24■■■□□ 2.27
HLA-A-204ENST00000396634 AQRO60306 1485 aaKnown RBP eCLIP29.23■■■□□ 2.27
HLA-A-204ENST00000396634 ABCA10Q8WWZ4 1543 aa29.2■■■□□ 2.26
HLA-A-204ENST00000396634 ABCA5Q8WWZ7 1642 aa29.11■■■□□ 2.25
HLA-A-204ENST00000396634 GAPVD1Q14C86 1478 aa29.06■■■□□ 2.24
HLA-A-204ENST00000396634 PBRM1Q86U86 1689 aa29.06■■■□□ 2.24
HLA-A-204ENST00000396634 RUSC2Q8N2Y8 1516 aa29.03■■■□□ 2.24
HLA-A-204ENST00000396634 GRIN2BQ13224 1484 aa28.95■■■□□ 2.23
HLA-A-204ENST00000396634 SNAPC4Q5SXM2 1469 aa28.95■■■□□ 2.22
HLA-A-204ENST00000396634 KIF27Q86VH2 1401 aa28.94■■■□□ 2.22
HLA-A-204ENST00000396634 FAM9AQ8IZU1 332 aaPredicted RBP28.85■■■□□ 2.21
HLA-A-204ENST00000396634 ERICH3Q5RHP9 1530 aa28.84■■■□□ 2.21
HLA-A-204ENST00000396634 CHD1O14646 1710 aa28.83■■■□□ 2.21
HLA-A-204ENST00000396634 FBLN2P98095 1184 aa28.82■■■□□ 2.2
HLA-A-204ENST00000396634 MAGI1Q96QZ7 1491 aaPredicted RBP28.81■■■□□ 2.2
HLA-A-204ENST00000396634 ADAMTS12P58397 1594 aa28.81■■■□□ 2.2
HLA-A-204ENST00000396634 IGF1RP08069 1367 aa28.8■■■□□ 2.2
HLA-A-204ENST00000396634 SYNJ2O15056 1496 aa28.72■■■□□ 2.19
HLA-A-204ENST00000396634 CUL7Q14999 1698 aa28.7■■■□□ 2.18
HLA-A-204ENST00000396634 CHMP7Q8WUX9 453 aaPredicted RBP28.7■■■□□ 2.18
HLA-A-204ENST00000396634 FHAD1B1AJZ9 1412 aa28.69■■■□□ 2.18
HLA-A-204ENST00000396634 CARMIL1Q5VZK9 1371 aa28.65■■■□□ 2.18
HLA-A-204ENST00000396634 GRIN2AQ12879 1464 aa28.63■■■□□ 2.17
HLA-A-204ENST00000396634 CSRNP3Q8WYN3 585 aa28.61■■■□□ 2.17
HLA-A-204ENST00000396634 EEA1Q15075 1411 aa28.6■■■□□ 2.17
HLA-A-204ENST00000396634 EHMT2Q96KQ7 1210 aa28.58■■■□□ 2.17
HLA-A-204ENST00000396634 CEP170Q5SW79 1584 aa28.54■■■□□ 2.16
HLA-A-204ENST00000396634 OSCARQ8IYS5 282 aa28.53■■■□□ 2.16
HLA-A-204ENST00000396634 PRXQ9BXM0 1461 aa28.53■■■□□ 2.16
HLA-A-204ENST00000396634 RAPGEF2Q9Y4G8 1499 aa28.51■■■□□ 2.16
HLA-A-204ENST00000396634 NUP160Q12769 1436 aa28.44■■■□□ 2.14
HLA-A-204ENST00000396634 CLASP1Q7Z460 1538 aa28.41■■■□□ 2.14
HLA-A-204ENST00000396634 KIF21BO75037 1637 aa28.4■■■□□ 2.14
HLA-A-204ENST00000396634 CTTNBP2Q8WZ74 1663 aa28.31■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms