RNA–Protein interactions for RNA: ENST00000616649.4

SALL3-206, Transcript of spalt like transcription factor 3, humanhuman

TSL 5 BASIC

Gene SALL3, Length 2,958 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SALL3-206ENST00000616649 NISCHQ9Y2I1 1504 aa33.05■■■□□ 2.88
SALL3-206ENST00000616649 SHROOM4Q9ULL8 1493 aa28.97■■■□□ 2.23
SALL3-206ENST00000616649 DCAF8L2P0C7V8 631 aa28.41■■■□□ 2.14
SALL3-206ENST00000616649 SUPT5HO00267 1087 aaKnown RBP28.35■■■□□ 2.13
SALL3-206ENST00000616649 ZCCHC6Q5VYS8 1495 aaKnown RBP27.87■■■□□ 2.05
SALL3-206ENST00000616649 CCDC180Q9P1Z9 1646 aa27.74■■■□□ 2.03
SALL3-206ENST00000616649 CHIC1Q5VXU3 224 aa27.15■■□□□ 1.94
SALL3-206ENST00000616649 MYO15BQ96JP2 1530 aa27.07■■□□□ 1.92
SALL3-206ENST00000616649 DCAF1Q9Y4B6 1507 aa26.7■■□□□ 1.87
SALL3-206ENST00000616649 LOC105371045A0A1W2PR82 267 aa26.7■■□□□ 1.86
SALL3-206ENST00000616649 SCRIBQ14160 1630 aa26.64■■□□□ 1.85
SALL3-206ENST00000616649 ABCC9O60706 1549 aa26.61■■□□□ 1.85
SALL3-206ENST00000616649 PCGF6Q9BYE7 350 aa26.53■■□□□ 1.84
SALL3-206ENST00000616649 EHMT2Q96KQ7 1210 aa26.46■■□□□ 1.83
SALL3-206ENST00000616649 FAM9AQ8IZU1 332 aaPredicted RBP26.34■■□□□ 1.81
SALL3-206ENST00000616649 RSF1Q96T23 1441 aaPredicted RBP26.29■■□□□ 1.8
SALL3-206ENST00000616649 TRIM41Q8WV44 630 aa26.14■■□□□ 1.77
SALL3-206ENST00000616649 CECR2Q9BXF3 1484 aa26.12■■□□□ 1.77
SALL3-206ENST00000616649 HRCP23327 699 aa26.11■■□□□ 1.77
SALL3-206ENST00000616649 PPARGC1BQ86YN6 1023 aaKnown RBP26.09■■□□□ 1.77
SALL3-206ENST00000616649 RB1CC1Q8TDY2 1594 aa26.06■■□□□ 1.76
SALL3-206ENST00000616649 MROH2BQ7Z745 1585 aa25.89■■□□□ 1.73
SALL3-206ENST00000616649 NACADO15069 1562 aa25.83■■□□□ 1.72
SALL3-206ENST00000616649 WIZO95785 1651 aa25.75■■□□□ 1.71
SALL3-206ENST00000616649 PABPN1Q86U42 306 aaKnown RBP eCLIP25.7■■□□□ 1.7
SALL3-206ENST00000616649 TRIM26Q12899 539 aaPredicted RBP25.65■■□□□ 1.7
SALL3-206ENST00000616649 TTBK1Q5TCY1 1321 aaPredicted RBP25.5■■□□□ 1.67
SALL3-206ENST00000616649 BAZ1AQ9NRL2 1556 aaPredicted RBP25.32■■□□□ 1.64
SALL3-206ENST00000616649 ABCC8Q09428 1581 aa25.31■■□□□ 1.64
SALL3-206ENST00000616649 CCDC88BA6NC98 1476 aa25.22■■□□□ 1.63
SALL3-206ENST00000616649 UNC13AQ9UPW8 1703 aa25.2■■□□□ 1.62
SALL3-206ENST00000616649 SMARCA4P51532 1647 aa25.16■■□□□ 1.62
SALL3-206ENST00000616649 SOGA1O94964 1423 aa25.08■■□□□ 1.61
SALL3-206ENST00000616649 TOP2AP11388 1531 aaKnown RBP25.07■■□□□ 1.6
SALL3-206ENST00000616649 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.05■■□□□ 1.6
SALL3-206ENST00000616649 SMARCA2P51531 1590 aa25.04■■□□□ 1.6
SALL3-206ENST00000616649 UBTFP17480 764 aaKnown RBP25.03■■□□□ 1.6
SALL3-206ENST00000616649 EIF4G1Q04637 1599 aaKnown RBP25.02■■□□□ 1.6
SALL3-206ENST00000616649 RANGAP1P46060 587 aaPredicted RBP25.02■■□□□ 1.6
SALL3-206ENST00000616649 RUSC2Q8N2Y8 1516 aa25.01■■□□□ 1.59
SALL3-206ENST00000616649 BICRAQ9NZM4 1560 aa24.94■■□□□ 1.58
SALL3-206ENST00000616649 CSRNP3Q8WYN3 585 aa24.85■■□□□ 1.57
SALL3-206ENST00000616649 CCER1Q8TC90 406 aaPredicted RBP24.84■■□□□ 1.57
SALL3-206ENST00000616649 ZEB1P37275 1124 aaPredicted RBP24.8■■□□□ 1.56
SALL3-206ENST00000616649 CEP162Q5TB80 1403 aa24.79■■□□□ 1.56
SALL3-206ENST00000616649 WRNQ14191 1432 aaPredicted RBP eCLIP24.71■■□□□ 1.55
SALL3-206ENST00000616649 ATAD2BQ9ULI0 1458 aa24.64■■□□□ 1.54
SALL3-206ENST00000616649 BAZ1BQ9UIG0 1483 aaKnown RBP24.62■■□□□ 1.53
SALL3-206ENST00000616649 TNIKQ9UKE5 1360 aa24.58■■□□□ 1.53
SALL3-206ENST00000616649 SYNJ1O43426 1573 aa24.57■■□□□ 1.52
SALL3-206ENST00000616649 HNRNPUL2Q1KMD3 747 aaKnown RBP24.55■■□□□ 1.52
SALL3-206ENST00000616649 GOLGA3Q08378 1498 aa24.47■■□□□ 1.51
SALL3-206ENST00000616649 PEG3Q9GZU2 1588 aa24.41■■□□□ 1.5
SALL3-206ENST00000616649 EEA1Q15075 1411 aa24.4■■□□□ 1.5
SALL3-206ENST00000616649 RAPGEF2Q9Y4G8 1499 aa24.39■■□□□ 1.49
SALL3-206ENST00000616649 CLIP1P30622 1438 aa24.35■■□□□ 1.49
SALL3-206ENST00000616649 CEP164Q9UPV0 1460 aa24.3■■□□□ 1.48
SALL3-206ENST00000616649 APLP2Q06481 763 aa24.3■■□□□ 1.48
SALL3-206ENST00000616649 DIEXFQ68CQ4 756 aaKnown RBP24.2■■□□□ 1.46
SALL3-206ENST00000616649 SCAF1Q9H7N4 1312 aaKnown RBP24.18■■□□□ 1.46
SALL3-206ENST00000616649 VPS8Q8N3P4 1428 aa24.1■■□□□ 1.45
SALL3-206ENST00000616649 KANK4Q5T7N3 995 aaPredicted RBP24.09■■□□□ 1.45
SALL3-206ENST00000616649 KIF21BO75037 1637 aa24.09■■□□□ 1.45
SALL3-206ENST00000616649 ITGAEP38570 1179 aa24.08■■□□□ 1.45
SALL3-206ENST00000616649 TOP2BQ02880 1626 aa24.07■■□□□ 1.44
SALL3-206ENST00000616649 CUX1P39880 1505 aa24.04■■□□□ 1.44
SALL3-206ENST00000616649 NCAPD3P42695 1498 aa24.03■■□□□ 1.44
SALL3-206ENST00000616649 YTHDC1Q96MU7 727 aaKnown RBP24.03■■□□□ 1.44
SALL3-206ENST00000616649 NEUROD1Q13562 356 aa24.02■■□□□ 1.44
SALL3-206ENST00000616649 P3H3Q8IVL6 736 aa23.97■■□□□ 1.43
SALL3-206ENST00000616649 ATP1B4Q9UN42 357 aaPredicted RBP23.94■■□□□ 1.42
SALL3-206ENST00000616649 ZNF316A6NFI3 1004 aaPredicted RBP23.92■■□□□ 1.42
SALL3-206ENST00000616649 KIF27Q86VH2 1401 aa23.9■■□□□ 1.42
SALL3-206ENST00000616649 ARAP1Q96P48 1450 aa23.89■■□□□ 1.42
SALL3-206ENST00000616649 PRXQ9BXM0 1461 aa23.89■■□□□ 1.42
SALL3-206ENST00000616649 CFTRP13569 1480 aa23.88■■□□□ 1.41
SALL3-206ENST00000616649 HMGXB3Q12766 1538 aa23.88■■□□□ 1.41
SALL3-206ENST00000616649 BIVM-ERCC5R4GMW8 1640 aa23.87■■□□□ 1.41
SALL3-206ENST00000616649 CUX2O14529 1486 aa23.85■■□□□ 1.41
SALL3-206ENST00000616649 ACIN1Q9UKV3 1341 aaKnown RBP23.83■■□□□ 1.41
SALL3-206ENST00000616649 MIER1Q8N108 512 aa23.79■■□□□ 1.4
SALL3-206ENST00000616649 GTF3C3Q9Y5Q9 886 aa23.76■■□□□ 1.39
SALL3-206ENST00000616649 CADPSQ9ULU8 1353 aa23.75■■□□□ 1.39
SALL3-206ENST00000616649 DNAJC5BQ9UF47 199 aa23.75■■□□□ 1.39
SALL3-206ENST00000616649 IGF1RP08069 1367 aa23.73■■□□□ 1.39
SALL3-206ENST00000616649 ARHGAP35Q9NRY4 1499 aa23.71■■□□□ 1.39
SALL3-206ENST00000616649 ERICH3Q5RHP9 1530 aa23.7■■□□□ 1.38
SALL3-206ENST00000616649 FGD5Q6ZNL6 1462 aa23.69■■□□□ 1.38
SALL3-206ENST00000616649 NESP48681 1621 aa23.68■■□□□ 1.38
SALL3-206ENST00000616649 CARMIL1Q5VZK9 1371 aa23.67■■□□□ 1.38
SALL3-206ENST00000616649 CC2D2AQ9P2K1 1620 aa23.65■■□□□ 1.38
SALL3-206ENST00000616649 RAD54L2Q9Y4B4 1467 aa23.64■■□□□ 1.38
SALL3-206ENST00000616649 CENPBP07199 599 aaPredicted RBP23.64■■□□□ 1.37
SALL3-206ENST00000616649 FAM50AQ14320 339 aaKnown RBP23.62■■□□□ 1.37
SALL3-206ENST00000616649 DHX57Q6P158 1386 aaKnown RBP23.61■■□□□ 1.37
SALL3-206ENST00000616649 FANCD2Q9BXW9 1451 aa23.56■■□□□ 1.36
SALL3-206ENST00000616649 CCNB3Q8WWL7 1395 aa23.55■■□□□ 1.36
SALL3-206ENST00000616649 FHOD3Q2V2M9 1422 aa23.48■■□□□ 1.35
SALL3-206ENST00000616649 TDRD9Q8NDG6 1382 aaKnown RBP23.45■■□□□ 1.34
SALL3-206ENST00000616649 PHLDB1Q86UU1 1377 aa23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 153 ms