RNA–Protein interactions for RNA: ENST00000522746.5

FAM49B-223, Transcript of family with sequence similarity 49 member B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM49B, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-223ENST00000522746 NISCHQ9Y2I1 1504 aa36.77■■■■□ 3.48
FAM49B-223ENST00000522746 CCDC180Q9P1Z9 1646 aa31.83■■■□□ 2.69
FAM49B-223ENST00000522746 ZCCHC6Q5VYS8 1495 aaKnown RBP30.91■■■□□ 2.54
FAM49B-223ENST00000522746 DCAF8L2P0C7V8 631 aa30.61■■■□□ 2.49
FAM49B-223ENST00000522746 SHROOM4Q9ULL8 1493 aa30.46■■■□□ 2.47
FAM49B-223ENST00000522746 ABCC9O60706 1549 aa30.28■■■□□ 2.44
FAM49B-223ENST00000522746 DCAF1Q9Y4B6 1507 aa30.22■■■□□ 2.43
FAM49B-223ENST00000522746 MYO15BQ96JP2 1530 aa29.75■■■□□ 2.35
FAM49B-223ENST00000522746 NACADO15069 1562 aa29.64■■■□□ 2.33
FAM49B-223ENST00000522746 SCRIBQ14160 1630 aa29.57■■■□□ 2.32
FAM49B-223ENST00000522746 SUPT5HO00267 1087 aaKnown RBP29.5■■■□□ 2.31
FAM49B-223ENST00000522746 RB1CC1Q8TDY2 1594 aa29.38■■■□□ 2.29
FAM49B-223ENST00000522746 UNC13AQ9UPW8 1703 aa28.92■■■□□ 2.22
FAM49B-223ENST00000522746 CECR2Q9BXF3 1484 aa28.72■■■□□ 2.19
FAM49B-223ENST00000522746 PABPN1Q86U42 306 aaKnown RBP eCLIP28.69■■■□□ 2.18
FAM49B-223ENST00000522746 RSF1Q96T23 1441 aaPredicted RBP28.68■■■□□ 2.18
FAM49B-223ENST00000522746 BICRAQ9NZM4 1560 aa28.63■■■□□ 2.17
FAM49B-223ENST00000522746 MROH2BQ7Z745 1585 aa28.52■■■□□ 2.16
FAM49B-223ENST00000522746 CHIC1Q5VXU3 224 aa28.4■■■□□ 2.14
FAM49B-223ENST00000522746 BAZ1AQ9NRL2 1556 aaPredicted RBP28.32■■■□□ 2.12
FAM49B-223ENST00000522746 WIZO95785 1651 aa28.31■■■□□ 2.12
FAM49B-223ENST00000522746 SMARCA4P51532 1647 aa28.24■■■□□ 2.11
FAM49B-223ENST00000522746 TOP2AP11388 1531 aaKnown RBP27.88■■■□□ 2.05
FAM49B-223ENST00000522746 PEG3Q9GZU2 1588 aa27.77■■■□□ 2.04
FAM49B-223ENST00000522746 ATAD2BQ9ULI0 1458 aa27.75■■■□□ 2.03
FAM49B-223ENST00000522746 EIF4G1Q04637 1599 aaKnown RBP27.72■■■□□ 2.03
FAM49B-223ENST00000522746 CCDC88BA6NC98 1476 aa27.7■■■□□ 2.03
FAM49B-223ENST00000522746 SMARCA2P51531 1590 aa27.69■■■□□ 2.02
FAM49B-223ENST00000522746 TRIM41Q8WV44 630 aa27.61■■■□□ 2.01
FAM49B-223ENST00000522746 BAZ1BQ9UIG0 1483 aaKnown RBP27.6■■■□□ 2.01
FAM49B-223ENST00000522746 LOC105371045A0A1W2PR82 267 aa27.43■■□□□ 1.98
FAM49B-223ENST00000522746 NCAPD3P42695 1498 aa27.41■■□□□ 1.98
FAM49B-223ENST00000522746 HMGXB3Q12766 1538 aa27.34■■□□□ 1.97
FAM49B-223ENST00000522746 CC2D2AQ9P2K1 1620 aa27.31■■□□□ 1.96
FAM49B-223ENST00000522746 ABCC8Q09428 1581 aa27.29■■□□□ 1.96
FAM49B-223ENST00000522746 FAM9AQ8IZU1 332 aaPredicted RBP27.25■■□□□ 1.95
FAM49B-223ENST00000522746 WRNQ14191 1432 aaPredicted RBP eCLIP26.96■■□□□ 1.91
FAM49B-223ENST00000522746 EHMT2Q96KQ7 1210 aa26.95■■□□□ 1.91
FAM49B-223ENST00000522746 SYNJ1O43426 1573 aa26.88■■□□□ 1.89
FAM49B-223ENST00000522746 CFTRP13569 1480 aa26.88■■□□□ 1.89
FAM49B-223ENST00000522746 DNAJC5BQ9UF47 199 aa26.88■■□□□ 1.89
FAM49B-223ENST00000522746 SOGA1O94964 1423 aa26.85■■□□□ 1.89
FAM49B-223ENST00000522746 CADPSQ9ULU8 1353 aa26.77■■□□□ 1.88
FAM49B-223ENST00000522746 RUSC2Q8N2Y8 1516 aa26.76■■□□□ 1.88
FAM49B-223ENST00000522746 EEA1Q15075 1411 aa26.71■■□□□ 1.87
FAM49B-223ENST00000522746 NESP48681 1621 aa26.67■■□□□ 1.86
FAM49B-223ENST00000522746 TOP2BQ02880 1626 aa26.67■■□□□ 1.86
FAM49B-223ENST00000522746 PRDM2Q13029 1718 aa26.66■■□□□ 1.86
FAM49B-223ENST00000522746 CUX1P39880 1505 aa26.64■■□□□ 1.85
FAM49B-223ENST00000522746 CSRNP3Q8WYN3 585 aa26.64■■□□□ 1.85
FAM49B-223ENST00000522746 BIVM-ERCC5R4GMW8 1640 aa26.63■■□□□ 1.85
FAM49B-223ENST00000522746 PCGF6Q9BYE7 350 aa26.61■■□□□ 1.85
FAM49B-223ENST00000522746 FANCD2Q9BXW9 1451 aa26.52■■□□□ 1.84
FAM49B-223ENST00000522746 GOLGA3Q08378 1498 aa26.45■■□□□ 1.82
FAM49B-223ENST00000522746 TNIKQ9UKE5 1360 aa26.44■■□□□ 1.82
FAM49B-223ENST00000522746 LAMC3Q9Y6N6 1575 aa26.41■■□□□ 1.82
FAM49B-223ENST00000522746 KIF21BO75037 1637 aa26.4■■□□□ 1.82
FAM49B-223ENST00000522746 CEP162Q5TB80 1403 aa26.39■■□□□ 1.81
FAM49B-223ENST00000522746 UBTFP17480 764 aaKnown RBP26.39■■□□□ 1.81
FAM49B-223ENST00000522746 TRIM26Q12899 539 aaPredicted RBP26.39■■□□□ 1.81
FAM49B-223ENST00000522746 CEP164Q9UPV0 1460 aa26.39■■□□□ 1.81
FAM49B-223ENST00000522746 FGD5Q6ZNL6 1462 aa26.31■■□□□ 1.8
FAM49B-223ENST00000522746 RAPGEF2Q9Y4G8 1499 aa26.27■■□□□ 1.8
FAM49B-223ENST00000522746 PDS5BQ9NTI5 1447 aa26.24■■□□□ 1.79
FAM49B-223ENST00000522746 TOPBP1Q92547 1522 aa26.24■■□□□ 1.79
FAM49B-223ENST00000522746 DNMBPQ6XZF7 1577 aa26.24■■□□□ 1.79
FAM49B-223ENST00000522746 KIF21AQ7Z4S6 1674 aa26.24■■□□□ 1.79
FAM49B-223ENST00000522746 URB2Q14146 1524 aaKnown RBP26.22■■□□□ 1.79
FAM49B-223ENST00000522746 KIF27Q86VH2 1401 aa26.21■■□□□ 1.79
FAM49B-223ENST00000522746 CUX2O14529 1486 aa26.18■■□□□ 1.78
FAM49B-223ENST00000522746 PPARGC1BQ86YN6 1023 aaKnown RBP26.18■■□□□ 1.78
FAM49B-223ENST00000522746 PRXQ9BXM0 1461 aa26.16■■□□□ 1.78
FAM49B-223ENST00000522746 RAD54L2Q9Y4B4 1467 aa26.16■■□□□ 1.78
FAM49B-223ENST00000522746 POLA1P09884 1462 aaPredicted RBP26.15■■□□□ 1.78
FAM49B-223ENST00000522746 HRCP23327 699 aa26.13■■□□□ 1.77
FAM49B-223ENST00000522746 ERICH3Q5RHP9 1530 aa26.12■■□□□ 1.77
FAM49B-223ENST00000522746 CLIP1P30622 1438 aa26.07■■□□□ 1.76
FAM49B-223ENST00000522746 IGF1RP08069 1367 aa26.02■■□□□ 1.76
FAM49B-223ENST00000522746 RANGAP1P46060 587 aaPredicted RBP26■■□□□ 1.75
FAM49B-223ENST00000522746 ABCA10Q8WWZ4 1543 aa25.99■■□□□ 1.75
FAM49B-223ENST00000522746 MRC2Q9UBG0 1479 aa25.93■■□□□ 1.74
FAM49B-223ENST00000522746 TDRD9Q8NDG6 1382 aaKnown RBP25.9■■□□□ 1.74
FAM49B-223ENST00000522746 WDR97A6NE52 1622 aa25.9■■□□□ 1.74
FAM49B-223ENST00000522746 TTBK1Q5TCY1 1321 aaPredicted RBP25.89■■□□□ 1.74
FAM49B-223ENST00000522746 VPS8Q8N3P4 1428 aa25.88■■□□□ 1.73
FAM49B-223ENST00000522746 CARMIL1Q5VZK9 1371 aa25.87■■□□□ 1.73
FAM49B-223ENST00000522746 ERCC6Q03468 1493 aa25.85■■□□□ 1.73
FAM49B-223ENST00000522746 TARBP1Q13395 1621 aaKnown RBP25.82■■□□□ 1.72
FAM49B-223ENST00000522746 ARAP1Q96P48 1450 aa25.78■■□□□ 1.72
FAM49B-223ENST00000522746 ABCA5Q8WWZ7 1642 aa25.78■■□□□ 1.72
FAM49B-223ENST00000522746 WDR62O43379 1518 aa25.77■■□□□ 1.72
FAM49B-223ENST00000522746 GAPVD1Q14C86 1478 aa25.75■■□□□ 1.71
FAM49B-223ENST00000522746 THOC2Q8NI27 1593 aaKnown RBP25.71■■□□□ 1.71
FAM49B-223ENST00000522746 AQRO60306 1485 aaKnown RBP eCLIP25.7■■□□□ 1.79e-8■■■■■ 31.5
FAM49B-223ENST00000522746 ARHGAP35Q9NRY4 1499 aa25.69■■□□□ 1.7
FAM49B-223ENST00000522746 CUL7Q14999 1698 aa25.67■■□□□ 1.7
FAM49B-223ENST00000522746 ZNF608Q9ULD9 1512 aaPredicted RBP25.66■■□□□ 1.7
FAM49B-223ENST00000522746 APLP2Q06481 763 aa25.63■■□□□ 1.69
FAM49B-223ENST00000522746 IFT140Q96RY7 1462 aa25.61■■□□□ 1.69
FAM49B-223ENST00000522746 PBRM1Q86U86 1689 aa25.58■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 141.5 ms