RNA–Protein interactions for RNA: ENST00000291722.11

CACFD1-201, Transcript of calcium channel flower domain containing 1, humanhuman

TSL 2 BASIC

Gene CACFD1, Length 2,688 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACFD1-201ENST00000291722 NISCHQ9Y2I1 1504 aa34.56■■■■□ 3.12
CACFD1-201ENST00000291722 CCDC180Q9P1Z9 1646 aa29.48■■■□□ 2.31
CACFD1-201ENST00000291722 SHROOM4Q9ULL8 1493 aa29.36■■■□□ 2.29
CACFD1-201ENST00000291722 ZCCHC6Q5VYS8 1495 aaKnown RBP29.17■■■□□ 2.26
CACFD1-201ENST00000291722 DCAF8L2P0C7V8 631 aa28.8■■■□□ 2.2
CACFD1-201ENST00000291722 SUPT5HO00267 1087 aaKnown RBP28.62■■■□□ 2.17
CACFD1-201ENST00000291722 DCAF1Q9Y4B6 1507 aa28.28■■■□□ 2.12
CACFD1-201ENST00000291722 SCRIBQ14160 1630 aa27.69■■■□□ 2.02
CACFD1-201ENST00000291722 ABCC9O60706 1549 aa27.66■■■□□ 2.02
CACFD1-201ENST00000291722 CHIC1Q5VXU3 224 aa27.65■■■□□ 2.02
CACFD1-201ENST00000291722 MYO15BQ96JP2 1530 aa27.55■■■□□ 2
CACFD1-201ENST00000291722 NACADO15069 1562 aa27.31■■□□□ 1.96
CACFD1-201ENST00000291722 RSF1Q96T23 1441 aaPredicted RBP27.25■■□□□ 1.95
CACFD1-201ENST00000291722 CECR2Q9BXF3 1484 aa27.05■■□□□ 1.92
CACFD1-201ENST00000291722 RB1CC1Q8TDY2 1594 aa26.97■■□□□ 1.91
CACFD1-201ENST00000291722 MROH2BQ7Z745 1585 aa26.91■■□□□ 1.9
CACFD1-201ENST00000291722 LOC105371045A0A1W2PR82 267 aa26.89■■□□□ 1.89
CACFD1-201ENST00000291722 WIZO95785 1651 aa26.77■■□□□ 1.88
CACFD1-201ENST00000291722 UNC13AQ9UPW8 1703 aa26.67■■□□□ 1.86
CACFD1-201ENST00000291722 TRIM41Q8WV44 630 aa26.61■■□□□ 1.85
CACFD1-201ENST00000291722 BAZ1AQ9NRL2 1556 aaPredicted RBP26.53■■□□□ 1.84
CACFD1-201ENST00000291722 PCGF6Q9BYE7 350 aa26.51■■□□□ 1.83
CACFD1-201ENST00000291722 FAM9AQ8IZU1 332 aaPredicted RBP26.48■■□□□ 1.83
CACFD1-201ENST00000291722 PABPN1Q86U42 306 aaKnown RBP eCLIP26.42■■□□□ 1.82
CACFD1-201ENST00000291722 SMARCA4P51532 1647 aa26.4■■□□□ 1.82
CACFD1-201ENST00000291722 EHMT2Q96KQ7 1210 aa26.33■■□□□ 1.81
CACFD1-201ENST00000291722 BICRAQ9NZM4 1560 aa26.31■■□□□ 1.8
CACFD1-201ENST00000291722 TOP2AP11388 1531 aaKnown RBP26.27■■□□□ 1.8
CACFD1-201ENST00000291722 EIF4G1Q04637 1599 aaKnown RBP26.25■■□□□ 1.79
CACFD1-201ENST00000291722 HRCP23327 699 aa26.25■■□□□ 1.79
CACFD1-201ENST00000291722 CCDC88BA6NC98 1476 aa26.19■■□□□ 1.78
CACFD1-201ENST00000291722 SMARCA2P51531 1590 aa26.15■■□□□ 1.78
CACFD1-201ENST00000291722 ABCC8Q09428 1581 aa26.08■■□□□ 1.77
CACFD1-201ENST00000291722 TRIM26Q12899 539 aaPredicted RBP25.99■■□□□ 1.75
CACFD1-201ENST00000291722 PELP1Q8IZL8 1130 aaKnown RBP25.93■■□□□ 1.74
CACFD1-201ENST00000291722 PPARGC1BQ86YN6 1023 aaKnown RBP25.9■■□□□ 1.74
CACFD1-201ENST00000291722 PEG3Q9GZU2 1588 aa25.85■■□□□ 1.73
CACFD1-201ENST00000291722 ATAD2BQ9ULI0 1458 aa25.78■■□□□ 1.72
CACFD1-201ENST00000291722 SOGA1O94964 1423 aa25.75■■□□□ 1.71
CACFD1-201ENST00000291722 RUSC2Q8N2Y8 1516 aa25.68■■□□□ 1.7
CACFD1-201ENST00000291722 BAZ1BQ9UIG0 1483 aaKnown RBP25.68■■□□□ 1.7
CACFD1-201ENST00000291722 WRNQ14191 1432 aaPredicted RBP eCLIP25.59■■□□□ 1.69
CACFD1-201ENST00000291722 SYNJ1O43426 1573 aa25.54■■□□□ 1.68
CACFD1-201ENST00000291722 CSRNP3Q8WYN3 585 aa25.51■■□□□ 1.67
CACFD1-201ENST00000291722 CEP162Q5TB80 1403 aa25.44■■□□□ 1.66
CACFD1-201ENST00000291722 EEA1Q15075 1411 aa25.41■■□□□ 1.66
CACFD1-201ENST00000291722 UBTFP17480 764 aaKnown RBP25.4■■□□□ 1.66
CACFD1-201ENST00000291722 TNIKQ9UKE5 1360 aa25.38■■□□□ 1.65
CACFD1-201ENST00000291722 TTBK1Q5TCY1 1321 aaPredicted RBP25.38■■□□□ 1.65
CACFD1-201ENST00000291722 GOLGA3Q08378 1498 aa25.3■■□□□ 1.64
CACFD1-201ENST00000291722 NCAPD3P42695 1498 aa25.29■■□□□ 1.64
CACFD1-201ENST00000291722 HMGXB3Q12766 1538 aa25.25■■□□□ 1.63
CACFD1-201ENST00000291722 TOP2BQ02880 1626 aa25.19■■□□□ 1.62
CACFD1-201ENST00000291722 ZEB1P37275 1124 aaPredicted RBP25.19■■□□□ 1.62
CACFD1-201ENST00000291722 CEP164Q9UPV0 1460 aa25.17■■□□□ 1.62
CACFD1-201ENST00000291722 KIF21BO75037 1637 aa25.16■■□□□ 1.62
CACFD1-201ENST00000291722 RAPGEF2Q9Y4G8 1499 aa25.12■■□□□ 1.61
CACFD1-201ENST00000291722 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.12■■□□□ 1.61
CACFD1-201ENST00000291722 MYT1Q01538 1121 aa25.11■■□□□ 1.61
CACFD1-201ENST00000291722 BIVM-ERCC5R4GMW8 1640 aa25.11■■□□□ 1.61
CACFD1-201ENST00000291722 RANGAP1P46060 587 aaPredicted RBP25.08■■□□□ 1.61
CACFD1-201ENST00000291722 CUX1P39880 1505 aa25.05■■□□□ 1.6
CACFD1-201ENST00000291722 CFTRP13569 1480 aa25.02■■□□□ 1.6
CACFD1-201ENST00000291722 CLIP1P30622 1438 aa25.02■■□□□ 1.6
CACFD1-201ENST00000291722 CCER1Q8TC90 406 aaPredicted RBP24.96■■□□□ 1.59
CACFD1-201ENST00000291722 CC2D2AQ9P2K1 1620 aa24.88■■□□□ 1.57
CACFD1-201ENST00000291722 VPS8Q8N3P4 1428 aa24.86■■□□□ 1.57
CACFD1-201ENST00000291722 PRXQ9BXM0 1461 aa24.86■■□□□ 1.57
CACFD1-201ENST00000291722 SCAF1Q9H7N4 1312 aaKnown RBP24.85■■□□□ 1.57
CACFD1-201ENST00000291722 PRDM2Q13029 1718 aa24.82■■□□□ 1.56
CACFD1-201ENST00000291722 CADPSQ9ULU8 1353 aa24.8■■□□□ 1.56
CACFD1-201ENST00000291722 KIF27Q86VH2 1401 aa24.79■■□□□ 1.56
CACFD1-201ENST00000291722 ERICH3Q5RHP9 1530 aa24.78■■□□□ 1.56
CACFD1-201ENST00000291722 HNRNPUL2Q1KMD3 747 aaKnown RBP24.71■■□□□ 1.55
CACFD1-201ENST00000291722 ARAP1Q96P48 1450 aa24.7■■□□□ 1.54
CACFD1-201ENST00000291722 APLP2Q06481 763 aa24.69■■□□□ 1.54
CACFD1-201ENST00000291722 CUX2O14529 1486 aa24.67■■□□□ 1.54
CACFD1-201ENST00000291722 FGD5Q6ZNL6 1462 aa24.64■■□□□ 1.54
CACFD1-201ENST00000291722 IGF1RP08069 1367 aa24.6■■□□□ 1.53
CACFD1-201ENST00000291722 NESP48681 1621 aa24.59■■□□□ 1.53
CACFD1-201ENST00000291722 FANCD2Q9BXW9 1451 aa24.58■■□□□ 1.53
CACFD1-201ENST00000291722 KANK4Q5T7N3 995 aaPredicted RBP24.56■■□□□ 1.52
CACFD1-201ENST00000291722 ARHGAP35Q9NRY4 1499 aa24.53■■□□□ 1.52
CACFD1-201ENST00000291722 DNAJC5BQ9UF47 199 aa24.48■■□□□ 1.51
CACFD1-201ENST00000291722 RAD54L2Q9Y4B4 1467 aa24.47■■□□□ 1.51
CACFD1-201ENST00000291722 CARMIL1Q5VZK9 1371 aa24.47■■□□□ 1.51
CACFD1-201ENST00000291722 DNMBPQ6XZF7 1577 aa24.4■■□□□ 1.5
CACFD1-201ENST00000291722 TOPBP1Q92547 1522 aa24.4■■□□□ 1.5
CACFD1-201ENST00000291722 POLA1P09884 1462 aaPredicted RBP24.38■■□□□ 1.49
CACFD1-201ENST00000291722 P3H3Q8IVL6 736 aa24.31■■□□□ 1.48
CACFD1-201ENST00000291722 ABCA10Q8WWZ4 1543 aa24.3■■□□□ 1.48
CACFD1-201ENST00000291722 DIEXFQ68CQ4 756 aaKnown RBP24.28■■□□□ 1.48
CACFD1-201ENST00000291722 URB2Q14146 1524 aaKnown RBP24.28■■□□□ 1.48
CACFD1-201ENST00000291722 LAMC3Q9Y6N6 1575 aa24.25■■□□□ 1.47
CACFD1-201ENST00000291722 RRBP1Q9P2E9 1410 aaKnown RBP24.23■■□□□ 1.47
CACFD1-201ENST00000291722 ITGAEP38570 1179 aa24.19■■□□□ 1.46
CACFD1-201ENST00000291722 ZNF316A6NFI3 1004 aaPredicted RBP24.18■■□□□ 1.46
CACFD1-201ENST00000291722 TIAM1Q13009 1591 aa24.18■■□□□ 1.46
CACFD1-201ENST00000291722 TDRD9Q8NDG6 1382 aaKnown RBP24.17■■□□□ 1.46
CACFD1-201ENST00000291722 CCNB3Q8WWL7 1395 aa24.16■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 138.9 ms