RNA–Protein interactions for RNA: ENST00000409551.7

PAX3-207, Transcript of paired box 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PAX3, Length 1,782 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX3-207ENST00000409551 NISCHQ9Y2I1 1504 aa37.43■■■■□ 3.58
PAX3-207ENST00000409551 CCDC180Q9P1Z9 1646 aa32.98■■■□□ 2.87
PAX3-207ENST00000409551 ABCC9O60706 1549 aa32.41■■■□□ 2.78
PAX3-207ENST00000409551 ZCCHC6Q5VYS8 1495 aaKnown RBP31.49■■■□□ 2.63
PAX3-207ENST00000409551 DCAF8L2P0C7V8 631 aa31.35■■■□□ 2.61
PAX3-207ENST00000409551 RB1CC1Q8TDY2 1594 aa31.09■■■□□ 2.57
PAX3-207ENST00000409551 NACADO15069 1562 aa31.03■■■□□ 2.56
PAX3-207ENST00000409551 DCAF1Q9Y4B6 1507 aa31.02■■■□□ 2.56
PAX3-207ENST00000409551 MYO15BQ96JP2 1530 aa30.78■■■□□ 2.52
PAX3-207ENST00000409551 SHROOM4Q9ULL8 1493 aa30.52■■■□□ 2.48
PAX3-207ENST00000409551 UNC13AQ9UPW8 1703 aa30.4■■■□□ 2.46
PAX3-207ENST00000409551 PABPN1Q86U42 306 aaKnown RBP eCLIP30.37■■■□□ 2.45
PAX3-207ENST00000409551 SCRIBQ14160 1630 aa30.25■■■□□ 2.43
PAX3-207ENST00000409551 BICRAQ9NZM4 1560 aa30.13■■■□□ 2.41
PAX3-207ENST00000409551 DNAJC5BQ9UF47 199 aa29.71■■■□□ 2.35
PAX3-207ENST00000409551 SUPT5HO00267 1087 aaKnown RBP29.45■■■□□ 2.31
PAX3-207ENST00000409551 EIF4G1Q04637 1599 aaKnown RBP29.36■■■□□ 2.29
PAX3-207ENST00000409551 CC2D2AQ9P2K1 1620 aa29.25■■■□□ 2.27
PAX3-207ENST00000409551 RSF1Q96T23 1441 aaPredicted RBP29.08■■■□□ 2.25
PAX3-207ENST00000409551 CECR2Q9BXF3 1484 aa29.06■■■□□ 2.24
PAX3-207ENST00000409551 BAZ1AQ9NRL2 1556 aaPredicted RBP28.91■■■□□ 2.22
PAX3-207ENST00000409551 MROH2BQ7Z745 1585 aa28.9■■■□□ 2.22
PAX3-207ENST00000409551 SMARCA4P51532 1647 aa28.86■■■□□ 2.21
PAX3-207ENST00000409551 ATAD2BQ9ULI0 1458 aa28.7■■■□□ 2.19
PAX3-207ENST00000409551 WIZO95785 1651 aa28.69■■■□□ 2.18
PAX3-207ENST00000409551 SMARCA2P51531 1590 aa28.65■■■□□ 2.18
PAX3-207ENST00000409551 NCAPD3P42695 1498 aa28.64■■■□□ 2.18
PAX3-207ENST00000409551 BAZ1BQ9UIG0 1483 aaKnown RBP28.51■■■□□ 2.15
PAX3-207ENST00000409551 PEG3Q9GZU2 1588 aa28.5■■■□□ 2.15
PAX3-207ENST00000409551 HMGXB3Q12766 1538 aa28.48■■■□□ 2.15
PAX3-207ENST00000409551 TOP2AP11388 1531 aaKnown RBP28.43■■■□□ 2.14
PAX3-207ENST00000409551 CHIC1Q5VXU3 224 aa28.34■■■□□ 2.13
PAX3-207ENST00000409551 CCDC88BA6NC98 1476 aa28.1■■■□□ 2.09
PAX3-207ENST00000409551 NESP48681 1621 aa28.05■■■□□ 2.08
PAX3-207ENST00000409551 ERCC6Q03468 1493 aa27.93■■■□□ 2.06
PAX3-207ENST00000409551 LAMC3Q9Y6N6 1575 aa27.88■■■□□ 2.05
PAX3-207ENST00000409551 CADPSQ9ULU8 1353 aa27.87■■■□□ 2.05
PAX3-207ENST00000409551 PDS5BQ9NTI5 1447 aa27.75■■■□□ 2.03
PAX3-207ENST00000409551 TRIM41Q8WV44 630 aa27.73■■■□□ 2.03
PAX3-207ENST00000409551 CFTRP13569 1480 aa27.68■■■□□ 2.02
PAX3-207ENST00000409551 KIF21AQ7Z4S6 1674 aa27.67■■■□□ 2.02
PAX3-207ENST00000409551 FANCD2Q9BXW9 1451 aa27.56■■■□□ 2
PAX3-207ENST00000409551 ABCC8Q09428 1581 aa27.54■■■□□ 2
PAX3-207ENST00000409551 CEP164Q9UPV0 1460 aa27.51■■□□□ 1.99
PAX3-207ENST00000409551 THOC2Q8NI27 1593 aaKnown RBP27.5■■□□□ 1.99
PAX3-207ENST00000409551 CUX2O14529 1486 aa27.49■■□□□ 1.99
PAX3-207ENST00000409551 MRC2Q9UBG0 1479 aa27.44■■□□□ 1.98
PAX3-207ENST00000409551 PRDM2Q13029 1718 aa27.43■■□□□ 1.98
PAX3-207ENST00000409551 WRNQ14191 1432 aaPredicted RBP eCLIP27.37■■□□□ 1.97
PAX3-207ENST00000409551 WDR62O43379 1518 aa27.31■■□□□ 1.96
PAX3-207ENST00000409551 URB2Q14146 1524 aaKnown RBP27.27■■□□□ 1.96
PAX3-207ENST00000409551 SYNJ1O43426 1573 aa27.26■■□□□ 1.95
PAX3-207ENST00000409551 LOC105371045A0A1W2PR82 267 aa27.2■■□□□ 1.95
PAX3-207ENST00000409551 TOP2BQ02880 1626 aa27.18■■□□□ 1.94
PAX3-207ENST00000409551 BIVM-ERCC5R4GMW8 1640 aa27.17■■□□□ 1.94
PAX3-207ENST00000409551 FAM9AQ8IZU1 332 aaPredicted RBP27.16■■□□□ 1.94
PAX3-207ENST00000409551 EEA1Q15075 1411 aa27.13■■□□□ 1.93
PAX3-207ENST00000409551 TOPBP1Q92547 1522 aa27.11■■□□□ 1.93
PAX3-207ENST00000409551 DNMBPQ6XZF7 1577 aa27.05■■□□□ 1.92
PAX3-207ENST00000409551 SOGA1O94964 1423 aa27.04■■□□□ 1.92
PAX3-207ENST00000409551 CUX1P39880 1505 aa27.02■■□□□ 1.92
PAX3-207ENST00000409551 RUSC2Q8N2Y8 1516 aa26.93■■□□□ 1.9
PAX3-207ENST00000409551 IFT140Q96RY7 1462 aa26.9■■□□□ 1.9
PAX3-207ENST00000409551 POLA1P09884 1462 aaPredicted RBP26.89■■□□□ 1.9
PAX3-207ENST00000409551 CSRNP3Q8WYN3 585 aa26.88■■□□□ 1.89
PAX3-207ENST00000409551 FGD5Q6ZNL6 1462 aa26.85■■□□□ 1.89
PAX3-207ENST00000409551 ZNF608Q9ULD9 1512 aaPredicted RBP26.84■■□□□ 1.89
PAX3-207ENST00000409551 RAD54L2Q9Y4B4 1467 aa26.83■■□□□ 1.89
PAX3-207ENST00000409551 TARBP1Q13395 1621 aaKnown RBP26.78■■□□□ 1.88
PAX3-207ENST00000409551 KIF21BO75037 1637 aa26.77■■□□□ 1.88
PAX3-207ENST00000409551 AQRO60306 1485 aaKnown RBP eCLIP26.73■■□□□ 1.87
PAX3-207ENST00000409551 GOLGA3Q08378 1498 aa26.72■■□□□ 1.87
PAX3-207ENST00000409551 TDRD9Q8NDG6 1382 aaKnown RBP26.71■■□□□ 1.87
PAX3-207ENST00000409551 EHMT2Q96KQ7 1210 aa26.71■■□□□ 1.87
PAX3-207ENST00000409551 EIF4G3O43432 1585 aaKnown RBP26.69■■□□□ 1.86
PAX3-207ENST00000409551 DNAJC5Q9H3Z4 198 aa26.67■■□□□ 1.86
PAX3-207ENST00000409551 KIF27Q86VH2 1401 aa26.67■■□□□ 1.86
PAX3-207ENST00000409551 TNIKQ9UKE5 1360 aa26.66■■□□□ 1.86
PAX3-207ENST00000409551 ERICH3Q5RHP9 1530 aa26.56■■□□□ 1.84
PAX3-207ENST00000409551 ABCA10Q8WWZ4 1543 aa26.54■■□□□ 1.84
PAX3-207ENST00000409551 PRXQ9BXM0 1461 aa26.54■■□□□ 1.84
PAX3-207ENST00000409551 WDR97A6NE52 1622 aa26.53■■□□□ 1.84
PAX3-207ENST00000409551 FBLN2P98095 1184 aa26.52■■□□□ 1.84
PAX3-207ENST00000409551 RAPGEF2Q9Y4G8 1499 aa26.51■■□□□ 1.83
PAX3-207ENST00000409551 UBTFP17480 764 aaKnown RBP26.51■■□□□ 1.83
PAX3-207ENST00000409551 CEP162Q5TB80 1403 aa26.5■■□□□ 1.83
PAX3-207ENST00000409551 OSCARQ8IYS5 282 aa26.49■■□□□ 1.83
PAX3-207ENST00000409551 GAPVD1Q14C86 1478 aa26.49■■□□□ 1.83
PAX3-207ENST00000409551 GRIN2BQ13224 1484 aa26.46■■□□□ 1.83
PAX3-207ENST00000409551 SNAPC4Q5SXM2 1469 aa26.44■■□□□ 1.82
PAX3-207ENST00000409551 ABCA5Q8WWZ7 1642 aa26.42■■□□□ 1.82
PAX3-207ENST00000409551 PBRM1Q86U86 1689 aa26.4■■□□□ 1.82
PAX3-207ENST00000409551 IGF1RP08069 1367 aa26.39■■□□□ 1.82
PAX3-207ENST00000409551 CHMP7Q8WUX9 453 aaPredicted RBP26.38■■□□□ 1.81
PAX3-207ENST00000409551 CHD1O14646 1710 aa26.36■■□□□ 1.81
PAX3-207ENST00000409551 MAGI1Q96QZ7 1491 aaPredicted RBP26.35■■□□□ 1.81
PAX3-207ENST00000409551 SYNJ2O15056 1496 aa26.27■■□□□ 1.8
PAX3-207ENST00000409551 CLIP1P30622 1438 aa26.27■■□□□ 1.8
PAX3-207ENST00000409551 CARMIL1Q5VZK9 1371 aa26.26■■□□□ 1.79
PAX3-207ENST00000409551 CUL7Q14999 1698 aa26.26■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 126.5 ms