RNA–Protein interactions for RNA: ENST00000398898.6

USP19-205, Transcript of ubiquitin specific peptidase 19, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP19, Length 4,474 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP19-205ENST00000398898 NISCHQ9Y2I1 1504 aa25.6■■□□□ 1.69
USP19-205ENST00000398898 DCAF8L2P0C7V8 631 aa24.49■■□□□ 1.51
USP19-205ENST00000398898 SUPT5HO00267 1087 aaKnown RBP24.42■■□□□ 1.5
USP19-205ENST00000398898 SHROOM4Q9ULL8 1493 aa23.97■■□□□ 1.43
USP19-205ENST00000398898 PCGF6Q9BYE7 350 aa23.56■■□□□ 1.36
USP19-205ENST00000398898 PELP1Q8IZL8 1130 aaKnown RBP23.55■■□□□ 1.36
USP19-205ENST00000398898 ZEB1P37275 1124 aaPredicted RBP23.4■■□□□ 1.34
USP19-205ENST00000398898 HRCP23327 699 aa23.19■■□□□ 1.3
USP19-205ENST00000398898 MYT1Q01538 1121 aa23.12■■□□□ 1.29
USP19-205ENST00000398898 CENPBP07199 599 aaPredicted RBP23.08■■□□□ 1.28
USP19-205ENST00000398898 EHMT2Q96KQ7 1210 aa22.95■■□□□ 1.26
USP19-205ENST00000398898 TRIM26Q12899 539 aaPredicted RBP22.82■■□□□ 1.24
USP19-205ENST00000398898 FAM9AQ8IZU1 332 aaPredicted RBP22.81■■□□□ 1.24
USP19-205ENST00000398898 APLP2Q06481 763 aa22.74■■□□□ 1.23
USP19-205ENST00000398898 TRIM41Q8WV44 630 aa22.74■■□□□ 1.23
USP19-205ENST00000398898 CCER1Q8TC90 406 aaPredicted RBP22.72■■□□□ 1.23
USP19-205ENST00000398898 CHIC1Q5VXU3 224 aa22.67■■□□□ 1.22
USP19-205ENST00000398898 PPARGC1BQ86YN6 1023 aaKnown RBP22.37■■□□□ 1.17
USP19-205ENST00000398898 TTBK1Q5TCY1 1321 aaPredicted RBP22.36■■□□□ 1.17
USP19-205ENST00000398898 LOC105371045A0A1W2PR82 267 aa22.29■■□□□ 1.16
USP19-205ENST00000398898 ERICH6Q7L0X2 663 aa22.16■■□□□ 1.14
USP19-205ENST00000398898 YTHDC1Q96MU7 727 aaKnown RBP22.16■■□□□ 1.14
USP19-205ENST00000398898 UBTFP17480 764 aaKnown RBP22.12■■□□□ 1.13
USP19-205ENST00000398898 NEFLP07196 543 aa22.06■■□□□ 1.12
USP19-205ENST00000398898 DIEXFQ68CQ4 756 aaKnown RBP21.94■■□□□ 1.1
USP19-205ENST00000398898 DCAF1Q9Y4B6 1507 aa21.82■■□□□ 1.08
USP19-205ENST00000398898 RANGAP1P46060 587 aaPredicted RBP21.79■■□□□ 1.08
USP19-205ENST00000398898 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.78■■□□□ 1.08
USP19-205ENST00000398898 GTF3C3Q9Y5Q9 886 aa21.73■■□□□ 1.07
USP19-205ENST00000398898 ACIN1Q9UKV3 1341 aaKnown RBP21.7■■□□□ 1.06
USP19-205ENST00000398898 HNRNPUL2Q1KMD3 747 aaKnown RBP21.59■■□□□ 1.05
USP19-205ENST00000398898 ZNF316A6NFI3 1004 aaPredicted RBP21.5■■□□□ 1.03
USP19-205ENST00000398898 ATP1B4Q9UN42 357 aaPredicted RBP21.46■■□□□ 1.03
USP19-205ENST00000398898 ZCCHC6Q5VYS8 1495 aaKnown RBP21.44■■□□□ 1.02
USP19-205ENST00000398898 CLSPNQ9HAW4 1339 aa21.37■■□□□ 1.01
USP19-205ENST00000398898 SCAF1Q9H7N4 1312 aaKnown RBP21.3■■□□□ 1
USP19-205ENST00000398898 ITGAEP38570 1179 aa21.27■■□□□ 1
USP19-205ENST00000398898 MYO15BQ96JP2 1530 aa21.25■□□□□ 0.99
USP19-205ENST00000398898 NEUROD1Q13562 356 aa21.19■□□□□ 0.98
USP19-205ENST00000398898 CCDC180Q9P1Z9 1646 aa21.17■□□□□ 0.98
USP19-205ENST00000398898 RTL5Q5HYW3 569 aaPredicted RBP21.07■□□□□ 0.96
USP19-205ENST00000398898 DAXXQ9UER7 740 aaPredicted RBP21.06■□□□□ 0.96
USP19-205ENST00000398898 CSRNP3Q8WYN3 585 aa21.04■□□□□ 0.96
USP19-205ENST00000398898 ANP32CO43423 234 aa21■□□□□ 0.95
USP19-205ENST00000398898 CDK11AQ9UQ88 783 aaPredicted RBP20.99■□□□□ 0.95
USP19-205ENST00000398898 BCANQ96GW7 911 aa20.99■□□□□ 0.95
USP19-205ENST00000398898 FAM50AQ14320 339 aaKnown RBP20.86■□□□□ 0.93
USP19-205ENST00000398898 POLR3GLQ9BT43 218 aa20.8■□□□□ 0.92
USP19-205ENST00000398898 MYT1LQ9UL68 1186 aa20.78■□□□□ 0.92
USP19-205ENST00000398898 MIER1Q8N108 512 aa20.75■□□□□ 0.91
USP19-205ENST00000398898 FKBP8Q14318 412 aa20.72■□□□□ 0.91
USP19-205ENST00000398898 ABCC9O60706 1549 aa20.67■□□□□ 0.9
USP19-205ENST00000398898 SCRIBQ14160 1630 aa20.66■□□□□ 0.9
USP19-205ENST00000398898 RSF1Q96T23 1441 aaPredicted RBP20.64■□□□□ 0.89
USP19-205ENST00000398898 EEA1Q15075 1411 aa20.64■□□□□ 0.89
USP19-205ENST00000398898 ANP32AP39687 249 aaKnown RBP20.59■□□□□ 0.89
USP19-205ENST00000398898 TRIM52Q96A61 297 aa20.59■□□□□ 0.89
USP19-205ENST00000398898 CNGB1Q14028 1251 aaPredicted RBP20.58■□□□□ 0.89
USP19-205ENST00000398898 CEP162Q5TB80 1403 aa20.54■□□□□ 0.88
USP19-205ENST00000398898 ANP32EQ9BTT0 268 aa20.53■□□□□ 0.88
USP19-205ENST00000398898 DDX10Q13206 875 aaKnown RBP20.5■□□□□ 0.87
USP19-205ENST00000398898 TNIKQ9UKE5 1360 aa20.48■□□□□ 0.87
USP19-205ENST00000398898 CLIP1P30622 1438 aa20.48■□□□□ 0.87
USP19-205ENST00000398898 TONSLQ96HA7 1378 aa20.47■□□□□ 0.87
USP19-205ENST00000398898 GOLGA3Q08378 1498 aa20.45■□□□□ 0.86
USP19-205ENST00000398898 HNRNPUQ00839 825 aaKnown RBP eCLIP20.44■□□□□ 0.86
USP19-205ENST00000398898 PABPN1Q86U42 306 aaKnown RBP eCLIP20.43■□□□□ 0.86
USP19-205ENST00000398898 RB1CC1Q8TDY2 1594 aa20.42■□□□□ 0.86
USP19-205ENST00000398898 SUPT16HQ9Y5B9 1047 aaKnown RBP20.31■□□□□ 0.84
USP19-205ENST00000398898 CEP164Q9UPV0 1460 aa20.25■□□□□ 0.83
USP19-205ENST00000398898 ZNF326Q5BKZ1 582 aaKnown RBP20.24■□□□□ 0.83
USP19-205ENST00000398898 ZBTB47Q9UFB7 747 aaPredicted RBP20.24■□□□□ 0.83
USP19-205ENST00000398898 CCDC136Q96JN2 1154 aa20.2■□□□□ 0.82
USP19-205ENST00000398898 P3H3Q8IVL6 736 aa20.2■□□□□ 0.82
USP19-205ENST00000398898 FAM9BQ8IZU0 186 aa20.19■□□□□ 0.82
USP19-205ENST00000398898 NPM2Q86SE8 214 aaKnown RBP20.18■□□□□ 0.82
USP19-205ENST00000398898 WRNQ14191 1432 aaPredicted RBP eCLIP20.15■□□□□ 0.82
USP19-205ENST00000398898 MRS2Q9HD23 443 aa20.13■□□□□ 0.81
USP19-205ENST00000398898 NBR1Q14596 966 aa20.11■□□□□ 0.81
USP19-205ENST00000398898 TIMELESSQ9UNS1 1208 aa20.07■□□□□ 0.8
USP19-205ENST00000398898 NACADO15069 1562 aa20.06■□□□□ 0.8
USP19-205ENST00000398898 EIF4G2P78344 907 aaKnown RBP eCLIP20.06■□□□□ 0.8
USP19-205ENST00000398898 BCL11AQ9H165 835 aa20.03■□□□□ 0.8
USP19-205ENST00000398898 EIF5BO60841 1220 aaKnown RBP20.03■□□□□ 0.8
USP19-205ENST00000398898 IRX6P78412 446 aaPredicted RBP20.03■□□□□ 0.8
USP19-205ENST00000398898 BAZ1AQ9NRL2 1556 aaPredicted RBP20.03■□□□□ 0.8
USP19-205ENST00000398898 TMC1Q8TDI8 760 aa20.03■□□□□ 0.8
USP19-205ENST00000398898 CCER2I3L3R5 266 aa20.02■□□□□ 0.8
USP19-205ENST00000398898 CANXP27824 592 aaKnown RBP20.02■□□□□ 0.8
USP19-205ENST00000398898 PPP4R2Q9NY27 417 aa20.02■□□□□ 0.8
USP19-205ENST00000398898 SLC4A1APQ9BWU0 796 aaKnown RBP20.02■□□□□ 0.79
USP19-205ENST00000398898 VPS8Q8N3P4 1428 aa20■□□□□ 0.79
USP19-205ENST00000398898 HIRIP3Q9BW71 556 aaPredicted RBP19.98■□□□□ 0.79
USP19-205ENST00000398898 GLIPR1L2Q4G1C9 344 aa19.97■□□□□ 0.79
USP19-205ENST00000398898 MTUS2Q5JR59 1369 aa19.97■□□□□ 0.79
USP19-205ENST00000398898 RBM19Q9Y4C8 960 aaKnown RBP19.95■□□□□ 0.78
USP19-205ENST00000398898 CCNB3Q8WWL7 1395 aa19.95■□□□□ 0.78
USP19-205ENST00000398898 TSHZ2Q9NRE2 1034 aa19.95■□□□□ 0.78
USP19-205ENST00000398898 SOGA1O94964 1423 aa19.94■□□□□ 0.78
USP19-205ENST00000398898 ERICH6BQ5W0A0 696 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms