RNA–Protein interactions for RNA: ENST00000520166.5

TSNARE1-205, Transcript of t-SNARE domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TSNARE1, Length 1,742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSNARE1-205ENST00000520166 NISCHQ9Y2I1 1504 aa39.67■■■■□ 3.94
TSNARE1-205ENST00000520166 CCDC180Q9P1Z9 1646 aa34.68■■■■□ 3.14
TSNARE1-205ENST00000520166 ABCC9O60706 1549 aa33.48■■■□□ 2.95
TSNARE1-205ENST00000520166 ZCCHC6Q5VYS8 1495 aaKnown RBP33.19■■■□□ 2.9
TSNARE1-205ENST00000520166 DCAF8L2P0C7V8 631 aa33.11■■■□□ 2.89
TSNARE1-205ENST00000520166 DCAF1Q9Y4B6 1507 aa32.68■■■□□ 2.82
TSNARE1-205ENST00000520166 NACADO15069 1562 aa32.46■■■□□ 2.79
TSNARE1-205ENST00000520166 MYO15BQ96JP2 1530 aa32.44■■■□□ 2.78
TSNARE1-205ENST00000520166 RB1CC1Q8TDY2 1594 aa32.31■■■□□ 2.76
TSNARE1-205ENST00000520166 SHROOM4Q9ULL8 1493 aa32.21■■■□□ 2.75
TSNARE1-205ENST00000520166 SCRIBQ14160 1630 aa32■■■□□ 2.71
TSNARE1-205ENST00000520166 UNC13AQ9UPW8 1703 aa31.73■■■□□ 2.67
TSNARE1-205ENST00000520166 PABPN1Q86U42 306 aaKnown RBP eCLIP31.57■■■□□ 2.64
TSNARE1-205ENST00000520166 BICRAQ9NZM4 1560 aa31.47■■■□□ 2.63
TSNARE1-205ENST00000520166 CECR2Q9BXF3 1484 aa30.99■■■□□ 2.55
TSNARE1-205ENST00000520166 SUPT5HO00267 1087 aaKnown RBP30.71■■■□□ 2.51
TSNARE1-205ENST00000520166 MROH2BQ7Z745 1585 aa30.7■■■□□ 2.51
TSNARE1-205ENST00000520166 RSF1Q96T23 1441 aaPredicted RBP30.64■■■□□ 2.5
TSNARE1-205ENST00000520166 BAZ1AQ9NRL2 1556 aaPredicted RBP30.6■■■□□ 2.49
TSNARE1-205ENST00000520166 SMARCA4P51532 1647 aa30.58■■■□□ 2.49
TSNARE1-205ENST00000520166 EIF4G1Q04637 1599 aaKnown RBP30.52■■■□□ 2.48
TSNARE1-205ENST00000520166 WIZO95785 1651 aa30.42■■■□□ 2.46
TSNARE1-205ENST00000520166 ATAD2BQ9ULI0 1458 aa30.24■■■□□ 2.43
TSNARE1-205ENST00000520166 CC2D2AQ9P2K1 1620 aa30.22■■■□□ 2.43
TSNARE1-205ENST00000520166 PEG3Q9GZU2 1588 aa30.17■■■□□ 2.42
TSNARE1-205ENST00000520166 DNAJC5BQ9UF47 199 aa30.15■■■□□ 2.42
TSNARE1-205ENST00000520166 SMARCA2P51531 1590 aa30.1■■■□□ 2.41
TSNARE1-205ENST00000520166 NCAPD3P42695 1498 aa30.03■■■□□ 2.4
TSNARE1-205ENST00000520166 BAZ1BQ9UIG0 1483 aaKnown RBP30■■■□□ 2.39
TSNARE1-205ENST00000520166 TOP2AP11388 1531 aaKnown RBP29.98■■■□□ 2.39
TSNARE1-205ENST00000520166 HMGXB3Q12766 1538 aa29.87■■■□□ 2.37
TSNARE1-205ENST00000520166 CCDC88BA6NC98 1476 aa29.77■■■□□ 2.36
TSNARE1-205ENST00000520166 NESP48681 1621 aa29.28■■■□□ 2.28
TSNARE1-205ENST00000520166 CADPSQ9ULU8 1353 aa29.25■■■□□ 2.27
TSNARE1-205ENST00000520166 CFTRP13569 1480 aa29.23■■■□□ 2.27
TSNARE1-205ENST00000520166 CHIC1Q5VXU3 224 aa29.1■■■□□ 2.25
TSNARE1-205ENST00000520166 LAMC3Q9Y6N6 1575 aa29.03■■■□□ 2.24
TSNARE1-205ENST00000520166 ABCC8Q09428 1581 aa29.02■■■□□ 2.24
TSNARE1-205ENST00000520166 PRDM2Q13029 1718 aa28.93■■■□□ 2.22
TSNARE1-205ENST00000520166 FANCD2Q9BXW9 1451 aa28.93■■■□□ 2.22
TSNARE1-205ENST00000520166 PDS5BQ9NTI5 1447 aa28.85■■■□□ 2.21
TSNARE1-205ENST00000520166 TRIM41Q8WV44 630 aa28.82■■■□□ 2.2
TSNARE1-205ENST00000520166 KIF21AQ7Z4S6 1674 aa28.81■■■□□ 2.2
TSNARE1-205ENST00000520166 WRNQ14191 1432 aaPredicted RBP eCLIP28.8■■■□□ 2.2
TSNARE1-205ENST00000520166 CEP164Q9UPV0 1460 aa28.75■■■□□ 2.19
TSNARE1-205ENST00000520166 SYNJ1O43426 1573 aa28.75■■■□□ 2.19
TSNARE1-205ENST00000520166 CUX1P39880 1505 aa28.72■■■□□ 2.19
TSNARE1-205ENST00000520166 ERCC6Q03468 1493 aa28.66■■■□□ 2.18
TSNARE1-205ENST00000520166 URB2Q14146 1524 aaKnown RBP28.64■■■□□ 2.17
TSNARE1-205ENST00000520166 TOP2BQ02880 1626 aa28.59■■■□□ 2.17
TSNARE1-205ENST00000520166 TOPBP1Q92547 1522 aa28.56■■■□□ 2.16
TSNARE1-205ENST00000520166 BIVM-ERCC5R4GMW8 1640 aa28.54■■■□□ 2.16
TSNARE1-205ENST00000520166 MRC2Q9UBG0 1479 aa28.53■■■□□ 2.16
TSNARE1-205ENST00000520166 DNMBPQ6XZF7 1577 aa28.52■■■□□ 2.16
TSNARE1-205ENST00000520166 FGD5Q6ZNL6 1462 aa28.46■■■□□ 2.15
TSNARE1-205ENST00000520166 THOC2Q8NI27 1593 aaKnown RBP28.45■■■□□ 2.14
TSNARE1-205ENST00000520166 FAM9AQ8IZU1 332 aaPredicted RBP28.41■■■□□ 2.14
TSNARE1-205ENST00000520166 POLA1P09884 1462 aaPredicted RBP28.39■■■□□ 2.14
TSNARE1-205ENST00000520166 SOGA1O94964 1423 aa28.39■■■□□ 2.14
TSNARE1-205ENST00000520166 WDR62O43379 1518 aa28.39■■■□□ 2.14
TSNARE1-205ENST00000520166 RAD54L2Q9Y4B4 1467 aa28.39■■■□□ 2.13
TSNARE1-205ENST00000520166 RUSC2Q8N2Y8 1516 aa28.36■■■□□ 2.13
TSNARE1-205ENST00000520166 CUX2O14529 1486 aa28.28■■■□□ 2.12
TSNARE1-205ENST00000520166 TARBP1Q13395 1621 aaKnown RBP28.17■■■□□ 2.1
TSNARE1-205ENST00000520166 TDRD9Q8NDG6 1382 aaKnown RBP28.16■■■□□ 2.1
TSNARE1-205ENST00000520166 ABCA10Q8WWZ4 1543 aa28.14■■■□□ 2.1
TSNARE1-205ENST00000520166 EHMT2Q96KQ7 1210 aa28.12■■■□□ 2.09
TSNARE1-205ENST00000520166 ZNF608Q9ULD9 1512 aaPredicted RBP28.09■■■□□ 2.09
TSNARE1-205ENST00000520166 WDR97A6NE52 1622 aa28.09■■■□□ 2.09
TSNARE1-205ENST00000520166 IFT140Q96RY7 1462 aa28.08■■■□□ 2.09
TSNARE1-205ENST00000520166 KIF27Q86VH2 1401 aa28.08■■■□□ 2.09
TSNARE1-205ENST00000520166 LOC105371045A0A1W2PR82 267 aa28.08■■■□□ 2.09
TSNARE1-205ENST00000520166 CSRNP3Q8WYN3 585 aa28.06■■■□□ 2.08
TSNARE1-205ENST00000520166 AQRO60306 1485 aaKnown RBP eCLIP28.05■■■□□ 2.087e-7■□□□□ 11.3
TSNARE1-205ENST00000520166 EEA1Q15075 1411 aa27.99■■■□□ 2.07
TSNARE1-205ENST00000520166 IGF1RP08069 1367 aa27.99■■■□□ 2.07
TSNARE1-205ENST00000520166 GAPVD1Q14C86 1478 aa27.96■■■□□ 2.07
TSNARE1-205ENST00000520166 ABCA5Q8WWZ7 1642 aa27.95■■■□□ 2.07
TSNARE1-205ENST00000520166 EIF4G3O43432 1585 aaKnown RBP27.88■■■□□ 2.05
TSNARE1-205ENST00000520166 PRXQ9BXM0 1461 aa27.81■■■□□ 2.04
TSNARE1-205ENST00000520166 CARMIL1Q5VZK9 1371 aa27.8■■■□□ 2.04
TSNARE1-205ENST00000520166 PBRM1Q86U86 1689 aa27.79■■■□□ 2.04
TSNARE1-205ENST00000520166 RAPGEF2Q9Y4G8 1499 aa27.79■■■□□ 2.04
TSNARE1-205ENST00000520166 GRIN2BQ13224 1484 aa27.78■■■□□ 2.04
TSNARE1-205ENST00000520166 ERICH3Q5RHP9 1530 aa27.77■■■□□ 2.04
TSNARE1-205ENST00000520166 SNAPC4Q5SXM2 1469 aa27.72■■■□□ 2.03
TSNARE1-205ENST00000520166 KIF21BO75037 1637 aa27.72■■■□□ 2.03
TSNARE1-205ENST00000520166 UBTFP17480 764 aaKnown RBP27.69■■■□□ 2.02
TSNARE1-205ENST00000520166 GOLGA3Q08378 1498 aa27.66■■■□□ 2.02
TSNARE1-205ENST00000520166 CUL7Q14999 1698 aa27.64■■■□□ 2.02
TSNARE1-205ENST00000520166 ADAMTS12P58397 1594 aa27.63■■■□□ 2.01
TSNARE1-205ENST00000520166 FHAD1B1AJZ9 1412 aa27.62■■■□□ 2.01
TSNARE1-205ENST00000520166 FBLN2P98095 1184 aa27.59■■■□□ 2.01
TSNARE1-205ENST00000520166 MAGI1Q96QZ7 1491 aaPredicted RBP27.56■■■□□ 2
TSNARE1-205ENST00000520166 RANGAP1P46060 587 aaPredicted RBP27.53■■■□□ 2
TSNARE1-205ENST00000520166 CHMP7Q8WUX9 453 aaPredicted RBP27.53■■■□□ 2
TSNARE1-205ENST00000520166 TNIKQ9UKE5 1360 aa27.51■■□□□ 1.99
TSNARE1-205ENST00000520166 SYNJ2O15056 1496 aa27.51■■□□□ 1.99
TSNARE1-205ENST00000520166 GRIN2AQ12879 1464 aa27.47■■□□□ 1.99
TSNARE1-205ENST00000520166 CHD1O14646 1710 aa27.38■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms