RNA–Protein interactions for RNA: ENST00000360190.8

CDK5RAP2-202, Transcript of CDK5 regulatory subunit associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CDK5RAP2, Length 5,985 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2-202ENST00000360190 NISCHQ9Y2I1 1504 aa24.35■■□□□ 1.49
CDK5RAP2-202ENST00000360190 DCAF8L2P0C7V8 631 aa24.15■■□□□ 1.46
CDK5RAP2-202ENST00000360190 SUPT5HO00267 1087 aaKnown RBP24.1■■□□□ 1.45
CDK5RAP2-202ENST00000360190 SHROOM4Q9ULL8 1493 aa23.63■■□□□ 1.37
CDK5RAP2-202ENST00000360190 PELP1Q8IZL8 1130 aaKnown RBP23.52■■□□□ 1.36
CDK5RAP2-202ENST00000360190 PCGF6Q9BYE7 350 aa23.44■■□□□ 1.34
CDK5RAP2-202ENST00000360190 MYT1Q01538 1121 aa23.15■■□□□ 1.3
CDK5RAP2-202ENST00000360190 EHMT2Q96KQ7 1210 aa23.06■■□□□ 1.28
CDK5RAP2-202ENST00000360190 ZEB1P37275 1124 aaPredicted RBP23.05■■□□□ 1.28
CDK5RAP2-202ENST00000360190 CENPBP07199 599 aaPredicted RBP22.98■■□□□ 1.27
CDK5RAP2-202ENST00000360190 HRCP23327 699 aa22.91■■□□□ 1.26
CDK5RAP2-202ENST00000360190 FAM9AQ8IZU1 332 aaPredicted RBP22.62■■□□□ 1.21
CDK5RAP2-202ENST00000360190 CCER1Q8TC90 406 aaPredicted RBP22.57■■□□□ 1.2
CDK5RAP2-202ENST00000360190 TRIM26Q12899 539 aaPredicted RBP22.45■■□□□ 1.19
CDK5RAP2-202ENST00000360190 TTBK1Q5TCY1 1321 aaPredicted RBP22.45■■□□□ 1.19
CDK5RAP2-202ENST00000360190 APLP2Q06481 763 aa22.45■■□□□ 1.18
CDK5RAP2-202ENST00000360190 ERICH6Q7L0X2 663 aa22.41■■□□□ 1.18
CDK5RAP2-202ENST00000360190 PPARGC1BQ86YN6 1023 aaKnown RBP22.38■■□□□ 1.17
CDK5RAP2-202ENST00000360190 YTHDC1Q96MU7 727 aaKnown RBP22.35■■□□□ 1.17
CDK5RAP2-202ENST00000360190 TRIM41Q8WV44 630 aa22.29■■□□□ 1.16
CDK5RAP2-202ENST00000360190 CHIC1Q5VXU3 224 aa22.07■■□□□ 1.12
CDK5RAP2-202ENST00000360190 NEFLP07196 543 aa22.02■■□□□ 1.12
CDK5RAP2-202ENST00000360190 LOC105371045A0A1W2PR82 267 aa21.99■■□□□ 1.11
CDK5RAP2-202ENST00000360190 DIEXFQ68CQ4 756 aaKnown RBP21.78■■□□□ 1.08
CDK5RAP2-202ENST00000360190 UBTFP17480 764 aaKnown RBP21.77■■□□□ 1.08
CDK5RAP2-202ENST00000360190 RANGAP1P46060 587 aaPredicted RBP21.76■■□□□ 1.07
CDK5RAP2-202ENST00000360190 GTF3C3Q9Y5Q9 886 aa21.74■■□□□ 1.07
CDK5RAP2-202ENST00000360190 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.62■■□□□ 1.05
CDK5RAP2-202ENST00000360190 ACIN1Q9UKV3 1341 aaKnown RBP21.56■■□□□ 1.04
CDK5RAP2-202ENST00000360190 HNRNPUL2Q1KMD3 747 aaKnown RBP21.39■■□□□ 1.01
CDK5RAP2-202ENST00000360190 ATP1B4Q9UN42 357 aaPredicted RBP21.35■■□□□ 1.01
CDK5RAP2-202ENST00000360190 SCAF1Q9H7N4 1312 aaKnown RBP21.27■■□□□ 1
CDK5RAP2-202ENST00000360190 ZNF316A6NFI3 1004 aaPredicted RBP21.22■□□□□ 0.99
CDK5RAP2-202ENST00000360190 DCAF1Q9Y4B6 1507 aa21.19■□□□□ 0.98
CDK5RAP2-202ENST00000360190 BCANQ96GW7 911 aa21.15■□□□□ 0.98
CDK5RAP2-202ENST00000360190 DAXXQ9UER7 740 aaPredicted RBP21.15■□□□□ 0.98
CDK5RAP2-202ENST00000360190 RTL5Q5HYW3 569 aaPredicted RBP21.15■□□□□ 0.98
CDK5RAP2-202ENST00000360190 ITGAEP38570 1179 aa21.15■□□□□ 0.98
CDK5RAP2-202ENST00000360190 NEUROD1Q13562 356 aa21.08■□□□□ 0.97
CDK5RAP2-202ENST00000360190 CDK11AQ9UQ88 783 aaPredicted RBP20.95■□□□□ 0.94
CDK5RAP2-202ENST00000360190 CLSPNQ9HAW4 1339 aa20.94■□□□□ 0.94
CDK5RAP2-202ENST00000360190 POLR3GLQ9BT43 218 aa20.84■□□□□ 0.93
CDK5RAP2-202ENST00000360190 ANP32CO43423 234 aa20.79■□□□□ 0.92
CDK5RAP2-202ENST00000360190 MYO15BQ96JP2 1530 aa20.78■□□□□ 0.92
CDK5RAP2-202ENST00000360190 CNGB1Q14028 1251 aaPredicted RBP20.75■□□□□ 0.91
CDK5RAP2-202ENST00000360190 FKBP8Q14318 412 aa20.68■□□□□ 0.9
CDK5RAP2-202ENST00000360190 CCDC180Q9P1Z9 1646 aa20.66■□□□□ 0.9
CDK5RAP2-202ENST00000360190 FAM50AQ14320 339 aaKnown RBP20.61■□□□□ 0.89
CDK5RAP2-202ENST00000360190 MYT1LQ9UL68 1186 aa20.58■□□□□ 0.88
CDK5RAP2-202ENST00000360190 MIER1Q8N108 512 aa20.56■□□□□ 0.88
CDK5RAP2-202ENST00000360190 ANP32AP39687 249 aaKnown RBP20.55■□□□□ 0.88
CDK5RAP2-202ENST00000360190 ANP32EQ9BTT0 268 aa20.52■□□□□ 0.88
CDK5RAP2-202ENST00000360190 CSRNP3Q8WYN3 585 aa20.39■□□□□ 0.85
CDK5RAP2-202ENST00000360190 TRIM52Q96A61 297 aa20.38■□□□□ 0.85
CDK5RAP2-202ENST00000360190 ZCCHC6Q5VYS8 1495 aaKnown RBP20.36■□□□□ 0.85
CDK5RAP2-202ENST00000360190 EIF5BO60841 1220 aaKnown RBP20.36■□□□□ 0.85
CDK5RAP2-202ENST00000360190 NPM2Q86SE8 214 aaKnown RBP20.33■□□□□ 0.84
CDK5RAP2-202ENST00000360190 NBR1Q14596 966 aa20.31■□□□□ 0.84
CDK5RAP2-202ENST00000360190 DDX10Q13206 875 aaKnown RBP20.3■□□□□ 0.84
CDK5RAP2-202ENST00000360190 HNRNPUQ00839 825 aaKnown RBP eCLIP20.27■□□□□ 0.84
CDK5RAP2-202ENST00000360190 BCL11AQ9H165 835 aa20.23■□□□□ 0.83
CDK5RAP2-202ENST00000360190 ZBTB47Q9UFB7 747 aaPredicted RBP20.2■□□□□ 0.82
CDK5RAP2-202ENST00000360190 SUPT16HQ9Y5B9 1047 aaKnown RBP20.17■□□□□ 0.82
CDK5RAP2-202ENST00000360190 GLIPR1L2Q4G1C9 344 aa20.13■□□□□ 0.81
CDK5RAP2-202ENST00000360190 ZNF326Q5BKZ1 582 aaKnown RBP20.13■□□□□ 0.81
CDK5RAP2-202ENST00000360190 IRX6P78412 446 aaPredicted RBP20.09■□□□□ 0.81
CDK5RAP2-202ENST00000360190 TONSLQ96HA7 1378 aa20.09■□□□□ 0.81
CDK5RAP2-202ENST00000360190 FAM9BQ8IZU0 186 aa20.08■□□□□ 0.81
CDK5RAP2-202ENST00000360190 CCDC136Q96JN2 1154 aa20.07■□□□□ 0.8
CDK5RAP2-202ENST00000360190 SLC4A1APQ9BWU0 796 aaKnown RBP20.04■□□□□ 0.8
CDK5RAP2-202ENST00000360190 CANXP27824 592 aaKnown RBP19.99■□□□□ 0.79
CDK5RAP2-202ENST00000360190 SCRIBQ14160 1630 aa19.95■□□□□ 0.78
CDK5RAP2-202ENST00000360190 CEP162Q5TB80 1403 aa19.95■□□□□ 0.78
CDK5RAP2-202ENST00000360190 P3H3Q8IVL6 736 aa19.9■□□□□ 0.78
CDK5RAP2-202ENST00000360190 HIRIP3Q9BW71 556 aaPredicted RBP19.88■□□□□ 0.77
CDK5RAP2-202ENST00000360190 MRS2Q9HD23 443 aa19.88■□□□□ 0.77
CDK5RAP2-202ENST00000360190 CLIP1P30622 1438 aa19.86■□□□□ 0.77
CDK5RAP2-202ENST00000360190 RBM19Q9Y4C8 960 aaKnown RBP19.85■□□□□ 0.77
CDK5RAP2-202ENST00000360190 ABCC9O60706 1549 aa19.85■□□□□ 0.77
CDK5RAP2-202ENST00000360190 ANP32BQ92688 251 aaKnown RBP19.85■□□□□ 0.77
CDK5RAP2-202ENST00000360190 PABPN1Q86U42 306 aaKnown RBP eCLIP19.84■□□□□ 0.772e-6■□□□□ 9.6
CDK5RAP2-202ENST00000360190 TSHZ2Q9NRE2 1034 aa19.83■□□□□ 0.76
CDK5RAP2-202ENST00000360190 NOP58Q9Y2X3 529 aaKnown RBP19.82■□□□□ 0.76
CDK5RAP2-202ENST00000360190 DDRGK1Q96HY6 314 aa19.8■□□□□ 0.76
CDK5RAP2-202ENST00000360190 UPF2Q9HAU5 1272 aaKnown RBP19.8■□□□□ 0.76
CDK5RAP2-202ENST00000360190 DEKP35659 375 aaKnown RBP19.79■□□□□ 0.76
CDK5RAP2-202ENST00000360190 PPP4R2Q9NY27 417 aa19.78■□□□□ 0.76
CDK5RAP2-202ENST00000360190 GOLGA3Q08378 1498 aa19.78■□□□□ 0.76
CDK5RAP2-202ENST00000360190 TMC1Q8TDI8 760 aa19.78■□□□□ 0.76
CDK5RAP2-202ENST00000360190 SALL2Q9Y467 1007 aaPredicted RBP19.76■□□□□ 0.75
CDK5RAP2-202ENST00000360190 RSF1Q96T23 1441 aaPredicted RBP19.76■□□□□ 0.75
CDK5RAP2-202ENST00000360190 RTN4Q9NQC3 1192 aaKnown RBP19.75■□□□□ 0.75
CDK5RAP2-202ENST00000360190 TNIKQ9UKE5 1360 aa19.75■□□□□ 0.75
CDK5RAP2-202ENST00000360190 EEA1Q15075 1411 aa19.74■□□□□ 0.75
CDK5RAP2-202ENST00000360190 ARXQ96QS3 562 aa19.73■□□□□ 0.75
CDK5RAP2-202ENST00000360190 PPM1GO15355 546 aaPredicted RBP19.71■□□□□ 0.75
CDK5RAP2-202ENST00000360190 NEFMP07197 916 aa19.69■□□□□ 0.74
CDK5RAP2-202ENST00000360190 HSP90AA1P07900 732 aaKnown RBP19.67■□□□□ 0.74
CDK5RAP2-202ENST00000360190 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.67■□□□□ 0.74
CDK5RAP2-202ENST00000360190 EIF4G2P78344 907 aaKnown RBP eCLIP19.66■□□□□ 0.748e-7■■■■■ 28.7
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms