RNA–Protein interactions for RNA: ENST00000542192.5

CACFD1-207, Transcript of calcium channel flower domain containing 1, humanhuman

TSL 2 BASIC

Gene CACFD1, Length 2,754 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACFD1-207ENST00000542192 NISCHQ9Y2I1 1504 aa34.1■■■■□ 3.05
CACFD1-207ENST00000542192 CCDC180Q9P1Z9 1646 aa29.2■■■□□ 2.27
CACFD1-207ENST00000542192 ZCCHC6Q5VYS8 1495 aaKnown RBP28.77■■■□□ 2.2
CACFD1-207ENST00000542192 SHROOM4Q9ULL8 1493 aa28.7■■■□□ 2.18
CACFD1-207ENST00000542192 DCAF8L2P0C7V8 631 aa28.27■■■□□ 2.12
CACFD1-207ENST00000542192 DCAF1Q9Y4B6 1507 aa28.02■■■□□ 2.08
CACFD1-207ENST00000542192 SUPT5HO00267 1087 aaKnown RBP27.96■■■□□ 2.07
CACFD1-207ENST00000542192 MYO15BQ96JP2 1530 aa27.36■■□□□ 1.97
CACFD1-207ENST00000542192 ABCC9O60706 1549 aa27.29■■□□□ 1.96
CACFD1-207ENST00000542192 SCRIBQ14160 1630 aa27.25■■□□□ 1.95
CACFD1-207ENST00000542192 NACADO15069 1562 aa27.07■■□□□ 1.92
CACFD1-207ENST00000542192 CHIC1Q5VXU3 224 aa27.06■■□□□ 1.92
CACFD1-207ENST00000542192 RSF1Q96T23 1441 aaPredicted RBP26.83■■□□□ 1.89
CACFD1-207ENST00000542192 RB1CC1Q8TDY2 1594 aa26.69■■□□□ 1.86
CACFD1-207ENST00000542192 CECR2Q9BXF3 1484 aa26.61■■□□□ 1.85
CACFD1-207ENST00000542192 MROH2BQ7Z745 1585 aa26.48■■□□□ 1.83
CACFD1-207ENST00000542192 UNC13AQ9UPW8 1703 aa26.33■■□□□ 1.81
CACFD1-207ENST00000542192 WIZO95785 1651 aa26.32■■□□□ 1.8
CACFD1-207ENST00000542192 LOC105371045A0A1W2PR82 267 aa26.22■■□□□ 1.79
CACFD1-207ENST00000542192 BAZ1AQ9NRL2 1556 aaPredicted RBP26.21■■□□□ 1.79
CACFD1-207ENST00000542192 TRIM41Q8WV44 630 aa26.1■■□□□ 1.77
CACFD1-207ENST00000542192 SMARCA4P51532 1647 aa26.05■■□□□ 1.76
CACFD1-207ENST00000542192 PABPN1Q86U42 306 aaKnown RBP eCLIP26.01■■□□□ 1.75
CACFD1-207ENST00000542192 BICRAQ9NZM4 1560 aa26.01■■□□□ 1.75
CACFD1-207ENST00000542192 HRCP23327 699 aa25.95■■□□□ 1.75
CACFD1-207ENST00000542192 TOP2AP11388 1531 aaKnown RBP25.91■■□□□ 1.74
CACFD1-207ENST00000542192 FAM9AQ8IZU1 332 aaPredicted RBP25.84■■□□□ 1.73
CACFD1-207ENST00000542192 EIF4G1Q04637 1599 aaKnown RBP25.83■■□□□ 1.73
CACFD1-207ENST00000542192 CCDC88BA6NC98 1476 aa25.79■■□□□ 1.72
CACFD1-207ENST00000542192 PCGF6Q9BYE7 350 aa25.78■■□□□ 1.72
CACFD1-207ENST00000542192 SMARCA2P51531 1590 aa25.76■■□□□ 1.71
CACFD1-207ENST00000542192 PPARGC1BQ86YN6 1023 aaKnown RBP25.7■■□□□ 1.7
CACFD1-207ENST00000542192 PEG3Q9GZU2 1588 aa25.6■■□□□ 1.69
CACFD1-207ENST00000542192 EHMT2Q96KQ7 1210 aa25.59■■□□□ 1.69
CACFD1-207ENST00000542192 ABCC8Q09428 1581 aa25.58■■□□□ 1.69
CACFD1-207ENST00000542192 ATAD2BQ9ULI0 1458 aa25.47■■□□□ 1.67
CACFD1-207ENST00000542192 TRIM26Q12899 539 aaPredicted RBP25.41■■□□□ 1.66
CACFD1-207ENST00000542192 BAZ1BQ9UIG0 1483 aaKnown RBP25.36■■□□□ 1.65
CACFD1-207ENST00000542192 SOGA1O94964 1423 aa25.26■■□□□ 1.63
CACFD1-207ENST00000542192 WRNQ14191 1432 aaPredicted RBP eCLIP25.2■■□□□ 1.62
CACFD1-207ENST00000542192 RUSC2Q8N2Y8 1516 aa25.16■■□□□ 1.62
CACFD1-207ENST00000542192 SYNJ1O43426 1573 aa25.1■■□□□ 1.61
CACFD1-207ENST00000542192 CSRNP3Q8WYN3 585 aa25.08■■□□□ 1.61
CACFD1-207ENST00000542192 EEA1Q15075 1411 aa25.08■■□□□ 1.6
CACFD1-207ENST00000542192 NCAPD3P42695 1498 aa25.05■■□□□ 1.6
CACFD1-207ENST00000542192 HMGXB3Q12766 1538 aa25.02■■□□□ 1.6
CACFD1-207ENST00000542192 PELP1Q8IZL8 1130 aaKnown RBP24.98■■□□□ 1.59
CACFD1-207ENST00000542192 TNIKQ9UKE5 1360 aa24.96■■□□□ 1.59
CACFD1-207ENST00000542192 CEP162Q5TB80 1403 aa24.95■■□□□ 1.59
CACFD1-207ENST00000542192 UBTFP17480 764 aaKnown RBP24.9■■□□□ 1.58
CACFD1-207ENST00000542192 GOLGA3Q08378 1498 aa24.87■■□□□ 1.57
CACFD1-207ENST00000542192 TOP2BQ02880 1626 aa24.84■■□□□ 1.57
CACFD1-207ENST00000542192 CEP164Q9UPV0 1460 aa24.78■■□□□ 1.56
CACFD1-207ENST00000542192 KIF21BO75037 1637 aa24.77■■□□□ 1.56
CACFD1-207ENST00000542192 BIVM-ERCC5R4GMW8 1640 aa24.77■■□□□ 1.56
CACFD1-207ENST00000542192 CFTRP13569 1480 aa24.74■■□□□ 1.55
CACFD1-207ENST00000542192 SCAF1Q9H7N4 1312 aaKnown RBP24.72■■□□□ 1.55
CACFD1-207ENST00000542192 CUX1P39880 1505 aa24.68■■□□□ 1.54
CACFD1-207ENST00000542192 RAPGEF2Q9Y4G8 1499 aa24.67■■□□□ 1.54
CACFD1-207ENST00000542192 TTBK1Q5TCY1 1321 aaPredicted RBP24.67■■□□□ 1.54
CACFD1-207ENST00000542192 ZEB1P37275 1124 aaPredicted RBP24.65■■□□□ 1.54
CACFD1-207ENST00000542192 CC2D2AQ9P2K1 1620 aa24.61■■□□□ 1.53
CACFD1-207ENST00000542192 CLIP1P30622 1438 aa24.57■■□□□ 1.52
CACFD1-207ENST00000542192 PRDM2Q13029 1718 aa24.55■■□□□ 1.52
CACFD1-207ENST00000542192 CADPSQ9ULU8 1353 aa24.53■■□□□ 1.52
CACFD1-207ENST00000542192 PRXQ9BXM0 1461 aa24.49■■□□□ 1.51
CACFD1-207ENST00000542192 RANGAP1P46060 587 aaPredicted RBP24.47■■□□□ 1.51
CACFD1-207ENST00000542192 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.46■■□□□ 1.51
CACFD1-207ENST00000542192 KIF27Q86VH2 1401 aa24.45■■□□□ 1.5
CACFD1-207ENST00000542192 ERICH3Q5RHP9 1530 aa24.44■■□□□ 1.5
CACFD1-207ENST00000542192 VPS8Q8N3P4 1428 aa24.42■■□□□ 1.5
CACFD1-207ENST00000542192 CCER1Q8TC90 406 aaPredicted RBP24.35■■□□□ 1.49
CACFD1-207ENST00000542192 CUX2O14529 1486 aa24.29■■□□□ 1.48
CACFD1-207ENST00000542192 FGD5Q6ZNL6 1462 aa24.29■■□□□ 1.48
CACFD1-207ENST00000542192 FANCD2Q9BXW9 1451 aa24.28■■□□□ 1.48
CACFD1-207ENST00000542192 ARAP1Q96P48 1450 aa24.25■■□□□ 1.47
CACFD1-207ENST00000542192 IGF1RP08069 1367 aa24.24■■□□□ 1.47
CACFD1-207ENST00000542192 APLP2Q06481 763 aa24.24■■□□□ 1.47
CACFD1-207ENST00000542192 NESP48681 1621 aa24.23■■□□□ 1.47
CACFD1-207ENST00000542192 DNMBPQ6XZF7 1577 aa24.12■■□□□ 1.45
CACFD1-207ENST00000542192 CARMIL1Q5VZK9 1371 aa24.11■■□□□ 1.45
CACFD1-207ENST00000542192 HNRNPUL2Q1KMD3 747 aaKnown RBP24.11■■□□□ 1.45
CACFD1-207ENST00000542192 ARHGAP35Q9NRY4 1499 aa24.11■■□□□ 1.45
CACFD1-207ENST00000542192 TOPBP1Q92547 1522 aa24.09■■□□□ 1.45
CACFD1-207ENST00000542192 DNAJC5BQ9UF47 199 aa24.09■■□□□ 1.45
CACFD1-207ENST00000542192 RAD54L2Q9Y4B4 1467 aa24.09■■□□□ 1.45
CACFD1-207ENST00000542192 POLA1P09884 1462 aaPredicted RBP24.06■■□□□ 1.44
CACFD1-207ENST00000542192 KANK4Q5T7N3 995 aaPredicted RBP24.05■■□□□ 1.44
CACFD1-207ENST00000542192 LAMC3Q9Y6N6 1575 aa24.04■■□□□ 1.44
CACFD1-207ENST00000542192 NEUROD1Q13562 356 aa24.03■■□□□ 1.44
CACFD1-207ENST00000542192 ABCA10Q8WWZ4 1543 aa24.01■■□□□ 1.43
CACFD1-207ENST00000542192 ACIN1Q9UKV3 1341 aaKnown RBP24■■□□□ 1.43
CACFD1-207ENST00000542192 URB2Q14146 1524 aaKnown RBP23.97■■□□□ 1.43
CACFD1-207ENST00000542192 MYT1Q01538 1121 aa23.93■■□□□ 1.42
CACFD1-207ENST00000542192 GTF3C3Q9Y5Q9 886 aa23.92■■□□□ 1.42
CACFD1-207ENST00000542192 PDS5BQ9NTI5 1447 aa23.88■■□□□ 1.41
CACFD1-207ENST00000542192 WDR97A6NE52 1622 aa23.84■■□□□ 1.41
CACFD1-207ENST00000542192 KIF21AQ7Z4S6 1674 aa23.83■■□□□ 1.4
CACFD1-207ENST00000542192 CUL7Q14999 1698 aa23.81■■□□□ 1.4
CACFD1-207ENST00000542192 RRBP1Q9P2E9 1410 aaKnown RBP23.81■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 703.2 ms