RNA–Protein interactions for RNA: ENST00000435145.6

HLA-DQB2-231, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 2,026 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-231ENST00000435145 NISCHQ9Y2I1 1504 aa34.02■■■■□ 3.04
HLA-DQB2-231ENST00000435145 CCDC180Q9P1Z9 1646 aa29.1■■■□□ 2.25
HLA-DQB2-231ENST00000435145 ZCCHC6Q5VYS8 1495 aaKnown RBP28.79■■■□□ 2.2
HLA-DQB2-231ENST00000435145 SHROOM4Q9ULL8 1493 aa28.53■■■□□ 2.16
HLA-DQB2-231ENST00000435145 DCAF1Q9Y4B6 1507 aa28.08■■■□□ 2.09
HLA-DQB2-231ENST00000435145 SUPT5HO00267 1087 aaKnown RBP27.92■■■□□ 2.06
HLA-DQB2-231ENST00000435145 DCAF8L2P0C7V8 631 aa27.77■■■□□ 2.04
HLA-DQB2-231ENST00000435145 MYO15BQ96JP2 1530 aa27.36■■□□□ 1.97
HLA-DQB2-231ENST00000435145 CHIC1Q5VXU3 224 aa27.28■■□□□ 1.96
HLA-DQB2-231ENST00000435145 ABCC9O60706 1549 aa27.14■■□□□ 1.93
HLA-DQB2-231ENST00000435145 SCRIBQ14160 1630 aa27■■□□□ 1.91
HLA-DQB2-231ENST00000435145 NACADO15069 1562 aa26.89■■□□□ 1.89
HLA-DQB2-231ENST00000435145 RSF1Q96T23 1441 aaPredicted RBP26.82■■□□□ 1.88
HLA-DQB2-231ENST00000435145 RB1CC1Q8TDY2 1594 aa26.56■■□□□ 1.84
HLA-DQB2-231ENST00000435145 CECR2Q9BXF3 1484 aa26.43■■□□□ 1.82
HLA-DQB2-231ENST00000435145 MROH2BQ7Z745 1585 aa26.37■■□□□ 1.81
HLA-DQB2-231ENST00000435145 LOC105371045A0A1W2PR82 267 aa26.31■■□□□ 1.8
HLA-DQB2-231ENST00000435145 HRCP23327 699 aa26.22■■□□□ 1.79
HLA-DQB2-231ENST00000435145 WIZO95785 1651 aa26.19■■□□□ 1.78
HLA-DQB2-231ENST00000435145 BAZ1AQ9NRL2 1556 aaPredicted RBP26.14■■□□□ 1.78
HLA-DQB2-231ENST00000435145 PCGF6Q9BYE7 350 aa26.14■■□□□ 1.77
HLA-DQB2-231ENST00000435145 TRIM41Q8WV44 630 aa26.12■■□□□ 1.77
HLA-DQB2-231ENST00000435145 UNC13AQ9UPW8 1703 aa25.99■■□□□ 1.75
HLA-DQB2-231ENST00000435145 EIF4G1Q04637 1599 aaKnown RBP25.97■■□□□ 1.75
HLA-DQB2-231ENST00000435145 SMARCA4P51532 1647 aa25.93■■□□□ 1.74
HLA-DQB2-231ENST00000435145 TOP2AP11388 1531 aaKnown RBP25.9■■□□□ 1.74
HLA-DQB2-231ENST00000435145 TRIM26Q12899 539 aaPredicted RBP25.84■■□□□ 1.73
HLA-DQB2-231ENST00000435145 FAM9AQ8IZU1 332 aaPredicted RBP25.74■■□□□ 1.71
HLA-DQB2-231ENST00000435145 SMARCA2P51531 1590 aa25.72■■□□□ 1.71
HLA-DQB2-231ENST00000435145 BICRAQ9NZM4 1560 aa25.71■■□□□ 1.71
HLA-DQB2-231ENST00000435145 CCDC88BA6NC98 1476 aa25.7■■□□□ 1.7
HLA-DQB2-231ENST00000435145 PEG3Q9GZU2 1588 aa25.56■■□□□ 1.68
HLA-DQB2-231ENST00000435145 ABCC8Q09428 1581 aa25.5■■□□□ 1.67
HLA-DQB2-231ENST00000435145 PPARGC1BQ86YN6 1023 aaKnown RBP25.5■■□□□ 1.67
HLA-DQB2-231ENST00000435145 PABPN1Q86U42 306 aaKnown RBP eCLIP25.45■■□□□ 1.66
HLA-DQB2-231ENST00000435145 EHMT2Q96KQ7 1210 aa25.36■■□□□ 1.65
HLA-DQB2-231ENST00000435145 EEA1Q15075 1411 aa25.29■■□□□ 1.64
HLA-DQB2-231ENST00000435145 ZEB1P37275 1124 aaPredicted RBP25.27■■□□□ 1.64
HLA-DQB2-231ENST00000435145 ATAD2BQ9ULI0 1458 aa25.27■■□□□ 1.64
HLA-DQB2-231ENST00000435145 SOGA1O94964 1423 aa25.25■■□□□ 1.63
HLA-DQB2-231ENST00000435145 WRNQ14191 1432 aaPredicted RBP eCLIP25.2■■□□□ 1.62
HLA-DQB2-231ENST00000435145 TNIKQ9UKE5 1360 aa25.16■■□□□ 1.62
HLA-DQB2-231ENST00000435145 BAZ1BQ9UIG0 1483 aaKnown RBP25.15■■□□□ 1.62
HLA-DQB2-231ENST00000435145 RUSC2Q8N2Y8 1516 aa25.12■■□□□ 1.61
HLA-DQB2-231ENST00000435145 CEP162Q5TB80 1403 aa25.11■■□□□ 1.61
HLA-DQB2-231ENST00000435145 CSRNP3Q8WYN3 585 aa25.1■■□□□ 1.61
HLA-DQB2-231ENST00000435145 SYNJ1O43426 1573 aa25.07■■□□□ 1.6
HLA-DQB2-231ENST00000435145 GOLGA3Q08378 1498 aa25.02■■□□□ 1.6
HLA-DQB2-231ENST00000435145 KIF21BO75037 1637 aa24.94■■□□□ 1.58
HLA-DQB2-231ENST00000435145 CEP164Q9UPV0 1460 aa24.91■■□□□ 1.58
HLA-DQB2-231ENST00000435145 HMGXB3Q12766 1538 aa24.88■■□□□ 1.57
HLA-DQB2-231ENST00000435145 NCAPD3P42695 1498 aa24.86■■□□□ 1.57
HLA-DQB2-231ENST00000435145 UBTFP17480 764 aaKnown RBP24.85■■□□□ 1.57
HLA-DQB2-231ENST00000435145 TOP2BQ02880 1626 aa24.84■■□□□ 1.57
HLA-DQB2-231ENST00000435145 BIVM-ERCC5R4GMW8 1640 aa24.79■■□□□ 1.56
HLA-DQB2-231ENST00000435145 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.68■■□□□ 1.54
HLA-DQB2-231ENST00000435145 CLIP1P30622 1438 aa24.67■■□□□ 1.54
HLA-DQB2-231ENST00000435145 RAPGEF2Q9Y4G8 1499 aa24.67■■□□□ 1.54
HLA-DQB2-231ENST00000435145 CCER1Q8TC90 406 aaPredicted RBP24.63■■□□□ 1.53
HLA-DQB2-231ENST00000435145 VPS8Q8N3P4 1428 aa24.61■■□□□ 1.53
HLA-DQB2-231ENST00000435145 CFTRP13569 1480 aa24.61■■□□□ 1.53
HLA-DQB2-231ENST00000435145 ERICH3Q5RHP9 1530 aa24.58■■□□□ 1.53
HLA-DQB2-231ENST00000435145 CUX1P39880 1505 aa24.58■■□□□ 1.53
HLA-DQB2-231ENST00000435145 PRXQ9BXM0 1461 aa24.57■■□□□ 1.52
HLA-DQB2-231ENST00000435145 TTBK1Q5TCY1 1321 aaPredicted RBP24.56■■□□□ 1.52
HLA-DQB2-231ENST00000435145 PRDM2Q13029 1718 aa24.45■■□□□ 1.5
HLA-DQB2-231ENST00000435145 KIF27Q86VH2 1401 aa24.42■■□□□ 1.5
HLA-DQB2-231ENST00000435145 ARAP1Q96P48 1450 aa24.35■■□□□ 1.49
HLA-DQB2-231ENST00000435145 CADPSQ9ULU8 1353 aa24.3■■□□□ 1.48
HLA-DQB2-231ENST00000435145 APLP2Q06481 763 aa24.29■■□□□ 1.48
HLA-DQB2-231ENST00000435145 RANGAP1P46060 587 aaPredicted RBP24.19■■□□□ 1.46
HLA-DQB2-231ENST00000435145 CC2D2AQ9P2K1 1620 aa24.19■■□□□ 1.46
HLA-DQB2-231ENST00000435145 HNRNPUL2Q1KMD3 747 aaKnown RBP24.18■■□□□ 1.46
HLA-DQB2-231ENST00000435145 CUX2O14529 1486 aa24.16■■□□□ 1.46
HLA-DQB2-231ENST00000435145 IGF1RP08069 1367 aa24.16■■□□□ 1.46
HLA-DQB2-231ENST00000435145 ARHGAP35Q9NRY4 1499 aa24.15■■□□□ 1.46
HLA-DQB2-231ENST00000435145 FGD5Q6ZNL6 1462 aa24.13■■□□□ 1.45
HLA-DQB2-231ENST00000435145 DIEXFQ68CQ4 756 aaKnown RBP24.11■■□□□ 1.45
HLA-DQB2-231ENST00000435145 RRBP1Q9P2E9 1410 aaKnown RBP24.06■■□□□ 1.44
HLA-DQB2-231ENST00000435145 KANK4Q5T7N3 995 aaPredicted RBP24.06■■□□□ 1.44
HLA-DQB2-231ENST00000435145 FANCD2Q9BXW9 1451 aa24.04■■□□□ 1.44
HLA-DQB2-231ENST00000435145 ZNF316A6NFI3 1004 aaPredicted RBP24.04■■□□□ 1.44
HLA-DQB2-231ENST00000435145 CARMIL1Q5VZK9 1371 aa24.02■■□□□ 1.44
HLA-DQB2-231ENST00000435145 DNMBPQ6XZF7 1577 aa23.99■■□□□ 1.43
HLA-DQB2-231ENST00000435145 MAP3K1Q13233 1512 aa23.98■■□□□ 1.43
HLA-DQB2-231ENST00000435145 SCAF1Q9H7N4 1312 aaKnown RBP23.98■■□□□ 1.43
HLA-DQB2-231ENST00000435145 CLSPNQ9HAW4 1339 aa23.97■■□□□ 1.43
HLA-DQB2-231ENST00000435145 ABCA10Q8WWZ4 1543 aa23.93■■□□□ 1.42
HLA-DQB2-231ENST00000435145 DHX57Q6P158 1386 aaKnown RBP23.91■■□□□ 1.42
HLA-DQB2-231ENST00000435145 TOPBP1Q92547 1522 aa23.9■■□□□ 1.42
HLA-DQB2-231ENST00000435145 TIAM1Q13009 1591 aa23.89■■□□□ 1.42
HLA-DQB2-231ENST00000435145 CCNB3Q8WWL7 1395 aa23.88■■□□□ 1.41
HLA-DQB2-231ENST00000435145 POLA1P09884 1462 aaPredicted RBP23.87■■□□□ 1.41
HLA-DQB2-231ENST00000435145 ACIN1Q9UKV3 1341 aaKnown RBP23.87■■□□□ 1.41
HLA-DQB2-231ENST00000435145 RAD54L2Q9Y4B4 1467 aa23.83■■□□□ 1.41
HLA-DQB2-231ENST00000435145 NESP48681 1621 aa23.83■■□□□ 1.4
HLA-DQB2-231ENST00000435145 LAMC3Q9Y6N6 1575 aa23.8■■□□□ 1.4
HLA-DQB2-231ENST00000435145 FHAD1B1AJZ9 1412 aa23.8■■□□□ 1.4
HLA-DQB2-231ENST00000435145 CUL7Q14999 1698 aa23.8■■□□□ 1.4
HLA-DQB2-231ENST00000435145 NEUROD1Q13562 356 aa23.79■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms