Protein–RNA interactions for Protein: O76009

KRT33A, Keratin, type I cuticular Ha3-I, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT33AO76009 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
KRT33AO76009 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
KRT33AO76009 DUSP8P4-201ENST00000399538 1761 ntBASIC21.46■■□□□ 1.03
KRT33AO76009 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC21.46■■□□□ 1.03
KRT33AO76009 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
KRT33AO76009 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC21.46■■□□□ 1.03
KRT33AO76009 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.03
KRT33AO76009 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC21.45■■□□□ 1.02
KRT33AO76009 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
KRT33AO76009 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
KRT33AO76009 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC21.45■■□□□ 1.02
KRT33AO76009 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
KRT33AO76009 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
KRT33AO76009 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
KRT33AO76009 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
KRT33AO76009 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
KRT33AO76009 AC026202.3-201ENST00000600805 1127 ntBASIC21.44■■□□□ 1.02
KRT33AO76009 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC21.44■■□□□ 1.02
KRT33AO76009 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
KRT33AO76009 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
KRT33AO76009 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
KRT33AO76009 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
KRT33AO76009 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC21.43■■□□□ 1.02
KRT33AO76009 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
KRT33AO76009 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC21.43■■□□□ 1.02
KRT33AO76009 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
KRT33AO76009 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
KRT33AO76009 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC21.43■■□□□ 1.02
KRT33AO76009 AC009831.1-201ENST00000580420 1582 ntBASIC21.43■■□□□ 1.02
KRT33AO76009 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
KRT33AO76009 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
KRT33AO76009 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
KRT33AO76009 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
KRT33AO76009 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
KRT33AO76009 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
KRT33AO76009 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC21.42■■□□□ 1.02
KRT33AO76009 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC21.42■■□□□ 1.02
KRT33AO76009 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
KRT33AO76009 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
KRT33AO76009 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
KRT33AO76009 AC092803.2-201ENST00000564287 1899 ntBASIC21.42■■□□□ 1.02
KRT33AO76009 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
KRT33AO76009 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC21.41■■□□□ 1.02
KRT33AO76009 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC21.4■■□□□ 1.02
KRT33AO76009 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC21.4■■□□□ 1.02
KRT33AO76009 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
KRT33AO76009 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
KRT33AO76009 NTF6A-201ENST00000591175 560 ntBASIC21.4■■□□□ 1.02
KRT33AO76009 U85056.1-201ENST00000616429 682 ntBASIC21.4■■□□□ 1.02
KRT33AO76009 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
KRT33AO76009 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC21.4■■□□□ 1.02
KRT33AO76009 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
KRT33AO76009 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC21.39■■□□□ 1.02
KRT33AO76009 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
KRT33AO76009 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.01
KRT33AO76009 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
KRT33AO76009 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
KRT33AO76009 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.38■■□□□ 1.01
KRT33AO76009 RAP2CP1-202ENST00000605179 643 ntBASIC21.38■■□□□ 1.01
KRT33AO76009 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
KRT33AO76009 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
KRT33AO76009 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
KRT33AO76009 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
KRT33AO76009 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
KRT33AO76009 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
KRT33AO76009 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC21.37■■□□□ 1.01
KRT33AO76009 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC21.37■■□□□ 1.01
KRT33AO76009 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC21.37■■□□□ 1.01
KRT33AO76009 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
KRT33AO76009 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
KRT33AO76009 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
KRT33AO76009 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC21.36■■□□□ 1.01
KRT33AO76009 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
KRT33AO76009 AL592293.1-201ENST00000502889 1188 ntBASIC21.36■■□□□ 1.01
KRT33AO76009 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
KRT33AO76009 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
KRT33AO76009 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
KRT33AO76009 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
KRT33AO76009 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
KRT33AO76009 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
KRT33AO76009 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
KRT33AO76009 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC21.36■■□□□ 1.01
KRT33AO76009 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
KRT33AO76009 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC21.35■■□□□ 1.01
KRT33AO76009 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
KRT33AO76009 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
KRT33AO76009 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
KRT33AO76009 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
KRT33AO76009 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
KRT33AO76009 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
KRT33AO76009 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC21.34■■□□□ 1.01
KRT33AO76009 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
KRT33AO76009 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
KRT33AO76009 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
KRT33AO76009 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
KRT33AO76009 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
KRT33AO76009 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
KRT33AO76009 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
KRT33AO76009 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
KRT33AO76009 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC21.34■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 123.4 ms