RNA–Protein interactions for RNA: ENST00000389531.7

SDK1-201, Transcript of sidekick cell adhesion molecule 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SDK1, Length 7,606 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDK1-201ENST00000389531 DCAF8L2P0C7V8 631 aa36.67■■■■□ 3.46
SDK1-201ENST00000389531 EHMT2Q96KQ7 1210 aa34.5■■■■□ 3.11
SDK1-201ENST00000389531 SUPT5HO00267 1087 aaKnown RBP34.15■■■■□ 3.06
SDK1-201ENST00000389531 SHROOM4Q9ULL8 1493 aa33.55■■■□□ 2.96
SDK1-201ENST00000389531 TTBK1Q5TCY1 1321 aaPredicted RBP33.21■■■□□ 2.91
SDK1-201ENST00000389531 PELP1Q8IZL8 1130 aaKnown RBP32.9■■■□□ 2.86
SDK1-201ENST00000389531 APLP2Q06481 763 aa32.79■■■□□ 2.84
SDK1-201ENST00000389531 RANGAP1P46060 587 aaPredicted RBP32.77■■■□□ 2.84
SDK1-201ENST00000389531 FAM9AQ8IZU1 332 aaPredicted RBP32.64■■■□□ 2.82
SDK1-201ENST00000389531 ATP1B4Q9UN42 357 aaPredicted RBP32.43■■■□□ 2.78
SDK1-201ENST00000389531 ERICH6Q7L0X2 663 aa32.26■■■□□ 2.75
SDK1-201ENST00000389531 PCGF6Q9BYE7 350 aa32.15■■■□□ 2.74
SDK1-201ENST00000389531 YTHDC1Q96MU7 727 aaKnown RBP31.62■■■□□ 2.65
SDK1-201ENST00000389531 CCER1Q8TC90 406 aaPredicted RBP31.58■■■□□ 2.65
SDK1-201ENST00000389531 NISCHQ9Y2I1 1504 aa31.55■■■□□ 2.64
SDK1-201ENST00000389531 CHIC1Q5VXU3 224 aa31.44■■■□□ 2.62
SDK1-201ENST00000389531 MYT1LQ9UL68 1186 aa31.44■■■□□ 2.62
SDK1-201ENST00000389531 PPARGC1BQ86YN6 1023 aaKnown RBP31.4■■■□□ 2.62
SDK1-201ENST00000389531 MYT1Q01538 1121 aa31.39■■■□□ 2.62
SDK1-201ENST00000389531 UBTFP17480 764 aaKnown RBP31.34■■■□□ 2.61
SDK1-201ENST00000389531 CENPBP07199 599 aaPredicted RBP31.32■■■□□ 2.6
SDK1-201ENST00000389531 POLR3GLQ9BT43 218 aa31.29■■■□□ 2.6
SDK1-201ENST00000389531 CNGB1Q14028 1251 aaPredicted RBP31.28■■■□□ 2.6
SDK1-201ENST00000389531 TRIM41Q8WV44 630 aa31.2■■■□□ 2.58
SDK1-201ENST00000389531 NEFLP07196 543 aa31.17■■■□□ 2.58
SDK1-201ENST00000389531 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.99■■■□□ 2.55
SDK1-201ENST00000389531 HNRNPUL2Q1KMD3 747 aaKnown RBP30.99■■■□□ 2.55
SDK1-201ENST00000389531 ITGAEP38570 1179 aa30.98■■■□□ 2.55
SDK1-201ENST00000389531 SLC4A1APQ9BWU0 796 aaKnown RBP30.92■■■□□ 2.54
SDK1-201ENST00000389531 DAXXQ9UER7 740 aaPredicted RBP30.76■■■□□ 2.52
SDK1-201ENST00000389531 ZEB1P37275 1124 aaPredicted RBP30.66■■■□□ 2.5
SDK1-201ENST00000389531 BCL11AQ9H165 835 aa30.22■■■□□ 2.43
SDK1-201ENST00000389531 CLSPNQ9HAW4 1339 aa30.18■■■□□ 2.42
SDK1-201ENST00000389531 SLC24A1O60721 1099 aa30.11■■■□□ 2.41
SDK1-201ENST00000389531 ZNF316A6NFI3 1004 aaPredicted RBP30.05■■■□□ 2.4
SDK1-201ENST00000389531 LOC105371045A0A1W2PR82 267 aa29.85■■■□□ 2.37
SDK1-201ENST00000389531 FAM50AQ14320 339 aaKnown RBP29.8■■■□□ 2.36
SDK1-201ENST00000389531 TRIM26Q12899 539 aaPredicted RBP29.78■■■□□ 2.36
SDK1-201ENST00000389531 TRIM52Q96A61 297 aa29.75■■■□□ 2.35
SDK1-201ENST00000389531 BCANQ96GW7 911 aa29.73■■■□□ 2.35
SDK1-201ENST00000389531 ZNF326Q5BKZ1 582 aaKnown RBP29.72■■■□□ 2.35
SDK1-201ENST00000389531 NEUROD1Q13562 356 aa29.7■■■□□ 2.35
SDK1-201ENST00000389531 HRCP23327 699 aa29.67■■■□□ 2.34
SDK1-201ENST00000389531 PLPPR3Q6T4P5 718 aa29.66■■■□□ 2.34
SDK1-201ENST00000389531 RTL5Q5HYW3 569 aaPredicted RBP29.64■■■□□ 2.34
SDK1-201ENST00000389531 FBLN2P98095 1184 aa29.56■■■□□ 2.32
SDK1-201ENST00000389531 ZBTB47Q9UFB7 747 aaPredicted RBP29.47■■■□□ 2.31
SDK1-201ENST00000389531 ARID3CA6NKF2 412 aa29.43■■■□□ 2.3
SDK1-201ENST00000389531 CANXP27824 592 aaKnown RBP29.33■■■□□ 2.29
SDK1-201ENST00000389531 PABPN1Q86U42 306 aaKnown RBP eCLIP29.26■■■□□ 2.27
SDK1-201ENST00000389531 DIEXFQ68CQ4 756 aaKnown RBP29.25■■■□□ 2.27
SDK1-201ENST00000389531 P3H3Q8IVL6 736 aa29.04■■■□□ 2.24
SDK1-201ENST00000389531 NPM2Q86SE8 214 aaKnown RBP28.98■■■□□ 2.23
SDK1-201ENST00000389531 NEFMP07197 916 aa28.98■■■□□ 2.23
SDK1-201ENST00000389531 ANP32CO43423 234 aa28.97■■■□□ 2.23
SDK1-201ENST00000389531 ZNF777Q9ULD5 760 aaPredicted RBP28.96■■■□□ 2.23
SDK1-201ENST00000389531 PLEKHG5O94827 1062 aa28.91■■■□□ 2.22
SDK1-201ENST00000389531 CDK11AQ9UQ88 783 aaPredicted RBP28.91■■■□□ 2.22
SDK1-201ENST00000389531 A0A0G2JS52 829 aa28.88■■■□□ 2.21
SDK1-201ENST00000389531 SENP3Q9H4L4 574 aaPredicted RBP28.88■■■□□ 2.21
SDK1-201ENST00000389531 CHGAP10645 457 aaKnown RBP28.87■■■□□ 2.21
SDK1-201ENST00000389531 SCAF1Q9H7N4 1312 aaKnown RBP28.87■■■□□ 2.21
SDK1-201ENST00000389531 ESF1Q9H501 851 aaKnown RBP28.79■■■□□ 2.2
SDK1-201ENST00000389531 STAG3Q9UJ98 1225 aa28.79■■■□□ 2.2
SDK1-201ENST00000389531 GTF3C3Q9Y5Q9 886 aa28.76■■■□□ 2.19
SDK1-201ENST00000389531 ABCC9O60706 1549 aa28.71■■■□□ 2.19
SDK1-201ENST00000389531 SALL2Q9Y467 1007 aaPredicted RBP28.71■■■□□ 2.19
SDK1-201ENST00000389531 ZBTB7CA1YPR0 619 aa28.61■■■□□ 2.17
SDK1-201ENST00000389531 ARXQ96QS3 562 aa28.6■■■□□ 2.17
SDK1-201ENST00000389531 HSP90AA1P07900 732 aaKnown RBP28.59■■■□□ 2.17
SDK1-201ENST00000389531 EIF5BO60841 1220 aaKnown RBP28.47■■■□□ 2.15
SDK1-201ENST00000389531 ANP32AP39687 249 aaKnown RBP28.47■■■□□ 2.15
SDK1-201ENST00000389531 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.42■■■□□ 2.149e-7■■□□□ 12.2
SDK1-201ENST00000389531 TULP1O00294 542 aaPredicted RBP28.36■■■□□ 2.13
SDK1-201ENST00000389531 FAM9BQ8IZU0 186 aa28.32■■■□□ 2.12
SDK1-201ENST00000389531 ANP32BQ92688 251 aaKnown RBP28.32■■■□□ 2.12
SDK1-201ENST00000389531 C14orf37Q86TY3 774 aa28.29■■■□□ 2.12
SDK1-201ENST00000389531 FKBP8Q14318 412 aa28.2■■■□□ 2.1
SDK1-201ENST00000389531 NBR1Q14596 966 aa28.19■■■□□ 2.1
SDK1-201ENST00000389531 KDM2AQ9Y2K7 1162 aa28.17■■■□□ 2.1
SDK1-201ENST00000389531 CHIC2Q9UKJ5 165 aa28.15■■■□□ 2.1
SDK1-201ENST00000389531 NPM1P06748 294 aaKnown RBP eCLIP28.15■■■□□ 2.1
SDK1-201ENST00000389531 TPRNQ4KMQ1 711 aa28.14■■■□□ 2.1
SDK1-201ENST00000389531 UPF2Q9HAU5 1272 aaKnown RBP28.11■■■□□ 2.09
SDK1-201ENST00000389531 HNRNPUQ00839 825 aaKnown RBP eCLIP28.09■■■□□ 2.09
SDK1-201ENST00000389531 SENP3-EIF4A1A0A087X0R7 540 aa28.08■■■□□ 2.09
SDK1-201ENST00000389531 TAOK2Q9UL54 1235 aa28.07■■■□□ 2.08
SDK1-201ENST00000389531 CDK11BP21127 795 aaKnown RBP28.05■■■□□ 2.08
SDK1-201ENST00000389531 IRX6P78412 446 aaPredicted RBP28.01■■■□□ 2.07
SDK1-201ENST00000389531 DDX10Q13206 875 aaKnown RBP28.01■■■□□ 2.07
SDK1-201ENST00000389531 HAP1P54257 671 aaPredicted RBP27.96■■■□□ 2.07
SDK1-201ENST00000389531 TONSLQ96HA7 1378 aa27.95■■■□□ 2.07
SDK1-201ENST00000389531 HIRIP3Q9BW71 556 aaPredicted RBP27.94■■■□□ 2.06
SDK1-201ENST00000389531 WDR43Q15061 677 aaKnown RBP eCLIP27.94■■■□□ 2.06
SDK1-201ENST00000389531 TMC1Q8TDI8 760 aa27.9■■■□□ 2.06
SDK1-201ENST00000389531 NCBP3Q53F19 620 aaKnown RBP27.87■■■□□ 2.05
SDK1-201ENST00000389531 CCDC136Q96JN2 1154 aa27.82■■■□□ 2.04
SDK1-201ENST00000389531 ARID4BQ4LE39 1312 aaPredicted RBP27.79■■■□□ 2.04
SDK1-201ENST00000389531 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.79■■■□□ 2.04
SDK1-201ENST00000389531 PPP1R15AO75807 674 aaPredicted RBP27.78■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms