RNA–Protein interactions for RNA: ENST00000389531.7

SDK1-201, Transcript of sidekick cell adhesion molecule 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SDK1, Length 7,606 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDK1-201ENST00000389531 DCAF8L2P0C7V8 631 aa36.67■■■■□ 3.46
SDK1-201ENST00000389531 EHMT2Q96KQ7 1210 aa34.5■■■■□ 3.11
SDK1-201ENST00000389531 SUPT5HO00267 1087 aaKnown RBP34.15■■■■□ 3.06
SDK1-201ENST00000389531 SHROOM4Q9ULL8 1493 aa33.55■■■□□ 2.96
SDK1-201ENST00000389531 TTBK1Q5TCY1 1321 aaPredicted RBP33.21■■■□□ 2.91
SDK1-201ENST00000389531 PELP1Q8IZL8 1130 aaKnown RBP32.9■■■□□ 2.86
SDK1-201ENST00000389531 APLP2Q06481 763 aa32.79■■■□□ 2.84
SDK1-201ENST00000389531 RANGAP1P46060 587 aaPredicted RBP32.77■■■□□ 2.84
SDK1-201ENST00000389531 FAM9AQ8IZU1 332 aaPredicted RBP32.64■■■□□ 2.82
SDK1-201ENST00000389531 ATP1B4Q9UN42 357 aaPredicted RBP32.43■■■□□ 2.78
SDK1-201ENST00000389531 ERICH6Q7L0X2 663 aa32.26■■■□□ 2.75
SDK1-201ENST00000389531 PCGF6Q9BYE7 350 aa32.15■■■□□ 2.74
SDK1-201ENST00000389531 YTHDC1Q96MU7 727 aaKnown RBP31.62■■■□□ 2.65
SDK1-201ENST00000389531 CCER1Q8TC90 406 aaPredicted RBP31.58■■■□□ 2.65
SDK1-201ENST00000389531 NISCHQ9Y2I1 1504 aa31.55■■■□□ 2.64
SDK1-201ENST00000389531 CHIC1Q5VXU3 224 aa31.44■■■□□ 2.62
SDK1-201ENST00000389531 MYT1LQ9UL68 1186 aa31.44■■■□□ 2.62
SDK1-201ENST00000389531 PPARGC1BQ86YN6 1023 aaKnown RBP31.4■■■□□ 2.62
SDK1-201ENST00000389531 MYT1Q01538 1121 aa31.39■■■□□ 2.62
SDK1-201ENST00000389531 UBTFP17480 764 aaKnown RBP31.34■■■□□ 2.61
SDK1-201ENST00000389531 CENPBP07199 599 aaPredicted RBP31.32■■■□□ 2.6
SDK1-201ENST00000389531 POLR3GLQ9BT43 218 aa31.29■■■□□ 2.6
SDK1-201ENST00000389531 CNGB1Q14028 1251 aaPredicted RBP31.28■■■□□ 2.6
SDK1-201ENST00000389531 TRIM41Q8WV44 630 aa31.2■■■□□ 2.58
SDK1-201ENST00000389531 NEFLP07196 543 aa31.17■■■□□ 2.58
SDK1-201ENST00000389531 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.99■■■□□ 2.55
SDK1-201ENST00000389531 HNRNPUL2Q1KMD3 747 aaKnown RBP30.99■■■□□ 2.55
SDK1-201ENST00000389531 ITGAEP38570 1179 aa30.98■■■□□ 2.55
SDK1-201ENST00000389531 SLC4A1APQ9BWU0 796 aaKnown RBP30.92■■■□□ 2.54
SDK1-201ENST00000389531 DAXXQ9UER7 740 aaPredicted RBP30.76■■■□□ 2.52
SDK1-201ENST00000389531 ZEB1P37275 1124 aaPredicted RBP30.66■■■□□ 2.5
SDK1-201ENST00000389531 BCL11AQ9H165 835 aa30.22■■■□□ 2.43
SDK1-201ENST00000389531 CLSPNQ9HAW4 1339 aa30.18■■■□□ 2.42
SDK1-201ENST00000389531 SLC24A1O60721 1099 aa30.11■■■□□ 2.41
SDK1-201ENST00000389531 ZNF316A6NFI3 1004 aaPredicted RBP30.05■■■□□ 2.4
SDK1-201ENST00000389531 LOC105371045A0A1W2PR82 267 aa29.85■■■□□ 2.37
SDK1-201ENST00000389531 FAM50AQ14320 339 aaKnown RBP29.8■■■□□ 2.36
SDK1-201ENST00000389531 TRIM26Q12899 539 aaPredicted RBP29.78■■■□□ 2.36
SDK1-201ENST00000389531 TRIM52Q96A61 297 aa29.75■■■□□ 2.35
SDK1-201ENST00000389531 BCANQ96GW7 911 aa29.73■■■□□ 2.35
SDK1-201ENST00000389531 ZNF326Q5BKZ1 582 aaKnown RBP29.72■■■□□ 2.35
SDK1-201ENST00000389531 NEUROD1Q13562 356 aa29.7■■■□□ 2.35
SDK1-201ENST00000389531 HRCP23327 699 aa29.67■■■□□ 2.34
SDK1-201ENST00000389531 PLPPR3Q6T4P5 718 aa29.66■■■□□ 2.34
SDK1-201ENST00000389531 RTL5Q5HYW3 569 aaPredicted RBP29.64■■■□□ 2.34
SDK1-201ENST00000389531 FBLN2P98095 1184 aa29.56■■■□□ 2.32
SDK1-201ENST00000389531 ZBTB47Q9UFB7 747 aaPredicted RBP29.47■■■□□ 2.31
SDK1-201ENST00000389531 ARID3CA6NKF2 412 aa29.43■■■□□ 2.3
SDK1-201ENST00000389531 CANXP27824 592 aaKnown RBP29.33■■■□□ 2.29
SDK1-201ENST00000389531 PABPN1Q86U42 306 aaKnown RBP eCLIP29.26■■■□□ 2.27
SDK1-201ENST00000389531 DIEXFQ68CQ4 756 aaKnown RBP29.25■■■□□ 2.27
SDK1-201ENST00000389531 P3H3Q8IVL6 736 aa29.04■■■□□ 2.24
SDK1-201ENST00000389531 NPM2Q86SE8 214 aaKnown RBP28.98■■■□□ 2.23
SDK1-201ENST00000389531 NEFMP07197 916 aa28.98■■■□□ 2.23
SDK1-201ENST00000389531 ANP32CO43423 234 aa28.97■■■□□ 2.23
SDK1-201ENST00000389531 ZNF777Q9ULD5 760 aaPredicted RBP28.96■■■□□ 2.23
SDK1-201ENST00000389531 PLEKHG5O94827 1062 aa28.91■■■□□ 2.22
SDK1-201ENST00000389531 CDK11AQ9UQ88 783 aaPredicted RBP28.91■■■□□ 2.22
SDK1-201ENST00000389531 A0A0G2JS52 829 aa28.88■■■□□ 2.21
SDK1-201ENST00000389531 SENP3Q9H4L4 574 aaPredicted RBP28.88■■■□□ 2.21
SDK1-201ENST00000389531 CHGAP10645 457 aaKnown RBP28.87■■■□□ 2.21
SDK1-201ENST00000389531 SCAF1Q9H7N4 1312 aaKnown RBP28.87■■■□□ 2.21
SDK1-201ENST00000389531 ESF1Q9H501 851 aaKnown RBP28.79■■■□□ 2.2
SDK1-201ENST00000389531 STAG3Q9UJ98 1225 aa28.79■■■□□ 2.2
SDK1-201ENST00000389531 GTF3C3Q9Y5Q9 886 aa28.76■■■□□ 2.19
SDK1-201ENST00000389531 ABCC9O60706 1549 aa28.71■■■□□ 2.19
SDK1-201ENST00000389531 SALL2Q9Y467 1007 aaPredicted RBP28.71■■■□□ 2.19
SDK1-201ENST00000389531 ZBTB7CA1YPR0 619 aa28.61■■■□□ 2.17
SDK1-201ENST00000389531 ARXQ96QS3 562 aa28.6■■■□□ 2.17
SDK1-201ENST00000389531 HSP90AA1P07900 732 aaKnown RBP28.59■■■□□ 2.17
SDK1-201ENST00000389531 EIF5BO60841 1220 aaKnown RBP28.47■■■□□ 2.15
SDK1-201ENST00000389531 ANP32AP39687 249 aaKnown RBP28.47■■■□□ 2.15
SDK1-201ENST00000389531 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.42■■■□□ 2.149e-7■■□□□ 12.2
SDK1-201ENST00000389531 TULP1O00294 542 aaPredicted RBP28.36■■■□□ 2.13
SDK1-201ENST00000389531 FAM9BQ8IZU0 186 aa28.32■■■□□ 2.12
SDK1-201ENST00000389531 ANP32BQ92688 251 aaKnown RBP28.32■■■□□ 2.12
SDK1-201ENST00000389531 C14orf37Q86TY3 774 aa28.29■■■□□ 2.12
SDK1-201ENST00000389531 FKBP8Q14318 412 aa28.2■■■□□ 2.1
SDK1-201ENST00000389531 NBR1Q14596 966 aa28.19■■■□□ 2.1
SDK1-201ENST00000389531 KDM2AQ9Y2K7 1162 aa28.17■■■□□ 2.1
SDK1-201ENST00000389531 CHIC2Q9UKJ5 165 aa28.15■■■□□ 2.1
SDK1-201ENST00000389531 NPM1P06748 294 aaKnown RBP eCLIP28.15■■■□□ 2.1
SDK1-201ENST00000389531 TPRNQ4KMQ1 711 aa28.14■■■□□ 2.1
SDK1-201ENST00000389531 UPF2Q9HAU5 1272 aaKnown RBP28.11■■■□□ 2.09
SDK1-201ENST00000389531 HNRNPUQ00839 825 aaKnown RBP eCLIP28.09■■■□□ 2.09
SDK1-201ENST00000389531 SENP3-EIF4A1A0A087X0R7 540 aa28.08■■■□□ 2.09
SDK1-201ENST00000389531 TAOK2Q9UL54 1235 aa28.07■■■□□ 2.08
SDK1-201ENST00000389531 CDK11BP21127 795 aaKnown RBP28.05■■■□□ 2.08
SDK1-201ENST00000389531 IRX6P78412 446 aaPredicted RBP28.01■■■□□ 2.07
SDK1-201ENST00000389531 DDX10Q13206 875 aaKnown RBP28.01■■■□□ 2.07
SDK1-201ENST00000389531 HAP1P54257 671 aaPredicted RBP27.96■■■□□ 2.07
SDK1-201ENST00000389531 TONSLQ96HA7 1378 aa27.95■■■□□ 2.07
SDK1-201ENST00000389531 HIRIP3Q9BW71 556 aaPredicted RBP27.94■■■□□ 2.06
SDK1-201ENST00000389531 WDR43Q15061 677 aaKnown RBP eCLIP27.94■■■□□ 2.06
SDK1-201ENST00000389531 TMC1Q8TDI8 760 aa27.9■■■□□ 2.06
SDK1-201ENST00000389531 NCBP3Q53F19 620 aaKnown RBP27.87■■■□□ 2.05
SDK1-201ENST00000389531 CCDC136Q96JN2 1154 aa27.82■■■□□ 2.04
SDK1-201ENST00000389531 ARID4BQ4LE39 1312 aaPredicted RBP27.79■■■□□ 2.04
SDK1-201ENST00000389531 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.79■■■□□ 2.04
SDK1-201ENST00000389531 PPP1R15AO75807 674 aaPredicted RBP27.78■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms