RNA–Protein interactions for RNA: ENST00000275015.9

NFKBIE-201, Transcript of NFKB inhibitor epsilon, humanhuman

TSL 1 (best) BASIC

Gene NFKBIE, Length 2,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKBIE-201ENST00000275015 NISCHQ9Y2I1 1504 aa48.96■■■■■ 5.43
NFKBIE-201ENST00000275015 SHROOM4Q9ULL8 1493 aa41.95■■■■■ 4.31
NFKBIE-201ENST00000275015 CCDC180Q9P1Z9 1646 aa41.47■■■■■ 4.23
NFKBIE-201ENST00000275015 ZCCHC6Q5VYS8 1495 aaKnown RBP41.38■■■■■ 4.21
NFKBIE-201ENST00000275015 SUPT5HO00267 1087 aaKnown RBP41.14■■■■■ 4.18
NFKBIE-201ENST00000275015 DCAF8L2P0C7V8 631 aa40.91■■■■■ 4.14
NFKBIE-201ENST00000275015 DCAF1Q9Y4B6 1507 aa40.05■■■■■ 4
NFKBIE-201ENST00000275015 CHIC1Q5VXU3 224 aa39.89■■■■□ 3.98
NFKBIE-201ENST00000275015 MYO15BQ96JP2 1530 aa39.7■■■■□ 3.95
NFKBIE-201ENST00000275015 SCRIBQ14160 1630 aa39.07■■■■□ 3.85
NFKBIE-201ENST00000275015 ABCC9O60706 1549 aa39■■■■□ 3.83
NFKBIE-201ENST00000275015 LOC105371045A0A1W2PR82 267 aa38.81■■■■□ 3.8
NFKBIE-201ENST00000275015 RSF1Q96T23 1441 aaPredicted RBP38.8■■■■□ 3.8
NFKBIE-201ENST00000275015 PCGF6Q9BYE7 350 aa38.69■■■■□ 3.78
NFKBIE-201ENST00000275015 HRCP23327 699 aa38.55■■■■□ 3.76
NFKBIE-201ENST00000275015 NACADO15069 1562 aa38.44■■■■□ 3.74
NFKBIE-201ENST00000275015 RB1CC1Q8TDY2 1594 aa38.35■■■■□ 3.73
NFKBIE-201ENST00000275015 CECR2Q9BXF3 1484 aa38.3■■■■□ 3.72
NFKBIE-201ENST00000275015 TRIM41Q8WV44 630 aa38.26■■■■□ 3.71
NFKBIE-201ENST00000275015 MROH2BQ7Z745 1585 aa38.12■■■■□ 3.69
NFKBIE-201ENST00000275015 FAM9AQ8IZU1 332 aaPredicted RBP38.05■■■■□ 3.68
NFKBIE-201ENST00000275015 PPARGC1BQ86YN6 1023 aaKnown RBP37.9■■■■□ 3.66
NFKBIE-201ENST00000275015 WIZO95785 1651 aa37.88■■■■□ 3.65
NFKBIE-201ENST00000275015 TRIM26Q12899 539 aaPredicted RBP37.85■■■■□ 3.65
NFKBIE-201ENST00000275015 EHMT2Q96KQ7 1210 aa37.81■■■■□ 3.64
NFKBIE-201ENST00000275015 BAZ1AQ9NRL2 1556 aaPredicted RBP37.57■■■■□ 3.6
NFKBIE-201ENST00000275015 SMARCA4P51532 1647 aa37.26■■■■□ 3.56
NFKBIE-201ENST00000275015 EIF4G1Q04637 1599 aaKnown RBP37.25■■■■□ 3.55
NFKBIE-201ENST00000275015 UNC13AQ9UPW8 1703 aa37.25■■■■□ 3.55
NFKBIE-201ENST00000275015 TOP2AP11388 1531 aaKnown RBP37.22■■■■□ 3.55
NFKBIE-201ENST00000275015 CCDC88BA6NC98 1476 aa37.17■■■■□ 3.54
NFKBIE-201ENST00000275015 PABPN1Q86U42 306 aaKnown RBP eCLIP37.16■■■■□ 3.54
NFKBIE-201ENST00000275015 ABCC8Q09428 1581 aa37.08■■■■□ 3.53
NFKBIE-201ENST00000275015 SMARCA2P51531 1590 aa37.05■■■■□ 3.52
NFKBIE-201ENST00000275015 ZEB1P37275 1124 aaPredicted RBP36.91■■■■□ 3.5
NFKBIE-201ENST00000275015 BICRAQ9NZM4 1560 aa36.86■■■■□ 3.49
NFKBIE-201ENST00000275015 SOGA1O94964 1423 aa36.77■■■■□ 3.48
NFKBIE-201ENST00000275015 RUSC2Q8N2Y8 1516 aa36.6■■■■□ 3.45
NFKBIE-201ENST00000275015 TTBK1Q5TCY1 1321 aaPredicted RBP36.56■■■■□ 3.44
NFKBIE-201ENST00000275015 CSRNP3Q8WYN3 585 aa36.55■■■■□ 3.44
NFKBIE-201ENST00000275015 CEP162Q5TB80 1403 aa36.53■■■■□ 3.44
NFKBIE-201ENST00000275015 PEG3Q9GZU2 1588 aa36.49■■■■□ 3.43
NFKBIE-201ENST00000275015 UBTFP17480 764 aaKnown RBP36.48■■■■□ 3.43
NFKBIE-201ENST00000275015 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP36.47■■■■□ 3.43
NFKBIE-201ENST00000275015 WRNQ14191 1432 aaPredicted RBP eCLIP36.44■■■■□ 3.42
NFKBIE-201ENST00000275015 TNIKQ9UKE5 1360 aa36.44■■■■□ 3.42
NFKBIE-201ENST00000275015 EEA1Q15075 1411 aa36.4■■■■□ 3.42
NFKBIE-201ENST00000275015 ATAD2BQ9ULI0 1458 aa36.38■■■■□ 3.41
NFKBIE-201ENST00000275015 CCER1Q8TC90 406 aaPredicted RBP36.32■■■■□ 3.41
NFKBIE-201ENST00000275015 BAZ1BQ9UIG0 1483 aaKnown RBP36.28■■■■□ 3.4
NFKBIE-201ENST00000275015 SYNJ1O43426 1573 aa36.23■■■■□ 3.39
NFKBIE-201ENST00000275015 GOLGA3Q08378 1498 aa36.22■■■■□ 3.39
NFKBIE-201ENST00000275015 CEP164Q9UPV0 1460 aa36.01■■■■□ 3.36
NFKBIE-201ENST00000275015 KIF21BO75037 1637 aa35.89■■■■□ 3.34
NFKBIE-201ENST00000275015 RANGAP1P46060 587 aaPredicted RBP35.89■■■■□ 3.34
NFKBIE-201ENST00000275015 CLIP1P30622 1438 aa35.87■■■■□ 3.33
NFKBIE-201ENST00000275015 RAPGEF2Q9Y4G8 1499 aa35.85■■■■□ 3.33
NFKBIE-201ENST00000275015 TOP2BQ02880 1626 aa35.73■■■■□ 3.31
NFKBIE-201ENST00000275015 HNRNPUL2Q1KMD3 747 aaKnown RBP35.67■■■■□ 3.3
NFKBIE-201ENST00000275015 VPS8Q8N3P4 1428 aa35.66■■■■□ 3.3
NFKBIE-201ENST00000275015 NCAPD3P42695 1498 aa35.64■■■■□ 3.3
NFKBIE-201ENST00000275015 APLP2Q06481 763 aa35.6■■■■□ 3.29
NFKBIE-201ENST00000275015 HMGXB3Q12766 1538 aa35.56■■■■□ 3.28
NFKBIE-201ENST00000275015 DIEXFQ68CQ4 756 aaKnown RBP35.55■■■■□ 3.28
NFKBIE-201ENST00000275015 BIVM-ERCC5R4GMW8 1640 aa35.54■■■■□ 3.28
NFKBIE-201ENST00000275015 SCAF1Q9H7N4 1312 aaKnown RBP35.52■■■■□ 3.28
NFKBIE-201ENST00000275015 CUX1P39880 1505 aa35.46■■■■□ 3.27
NFKBIE-201ENST00000275015 PRXQ9BXM0 1461 aa35.43■■■■□ 3.26
NFKBIE-201ENST00000275015 CFTRP13569 1480 aa35.37■■■■□ 3.25
NFKBIE-201ENST00000275015 ERICH3Q5RHP9 1530 aa35.33■■■■□ 3.25
NFKBIE-201ENST00000275015 KIF27Q86VH2 1401 aa35.3■■■■□ 3.24
NFKBIE-201ENST00000275015 ZNF316A6NFI3 1004 aaPredicted RBP35.27■■■■□ 3.24
NFKBIE-201ENST00000275015 ARAP1Q96P48 1450 aa35.26■■■■□ 3.23
NFKBIE-201ENST00000275015 KANK4Q5T7N3 995 aaPredicted RBP35.21■■■■□ 3.23
NFKBIE-201ENST00000275015 NEUROD1Q13562 356 aa35.2■■■■□ 3.23
NFKBIE-201ENST00000275015 ACIN1Q9UKV3 1341 aaKnown RBP35.18■■■■□ 3.22
NFKBIE-201ENST00000275015 CADPSQ9ULU8 1353 aa35.02■■■■□ 3.2
NFKBIE-201ENST00000275015 CUX2O14529 1486 aa35.01■■■■□ 3.2
NFKBIE-201ENST00000275015 ARHGAP35Q9NRY4 1499 aa34.98■■■■□ 3.19
NFKBIE-201ENST00000275015 IGF1RP08069 1367 aa34.98■■■■□ 3.19
NFKBIE-201ENST00000275015 CENPBP07199 599 aaPredicted RBP34.96■■■■□ 3.19
NFKBIE-201ENST00000275015 PRDM2Q13029 1718 aa34.86■■■■□ 3.17
NFKBIE-201ENST00000275015 FGD5Q6ZNL6 1462 aa34.86■■■■□ 3.17
NFKBIE-201ENST00000275015 DHX57Q6P158 1386 aaKnown RBP34.84■■■■□ 3.17
NFKBIE-201ENST00000275015 MIER1Q8N108 512 aa34.83■■■■□ 3.17
NFKBIE-201ENST00000275015 GTF3C3Q9Y5Q9 886 aa34.82■■■■□ 3.17
NFKBIE-201ENST00000275015 CARMIL1Q5VZK9 1371 aa34.82■■■■□ 3.16
NFKBIE-201ENST00000275015 RRBP1Q9P2E9 1410 aaKnown RBP34.8■■■■□ 3.16
NFKBIE-201ENST00000275015 YTHDC1Q96MU7 727 aaKnown RBP34.8■■■■□ 3.16
NFKBIE-201ENST00000275015 ITGAEP38570 1179 aa34.79■■■■□ 3.16
NFKBIE-201ENST00000275015 CC2D2AQ9P2K1 1620 aa34.77■■■■□ 3.16
NFKBIE-201ENST00000275015 CCNB3Q8WWL7 1395 aa34.74■■■■□ 3.15
NFKBIE-201ENST00000275015 CLSPNQ9HAW4 1339 aa34.7■■■■□ 3.15
NFKBIE-201ENST00000275015 FANCD2Q9BXW9 1451 aa34.68■■■■□ 3.14
NFKBIE-201ENST00000275015 P3H3Q8IVL6 736 aa34.64■■■■□ 3.14
NFKBIE-201ENST00000275015 RAD54L2Q9Y4B4 1467 aa34.57■■■■□ 3.13
NFKBIE-201ENST00000275015 ATP1B4Q9UN42 357 aaPredicted RBP34.53■■■■□ 3.12
NFKBIE-201ENST00000275015 TIAM1Q13009 1591 aa34.53■■■■□ 3.12
NFKBIE-201ENST00000275015 NESP48681 1621 aa34.52■■■■□ 3.12
NFKBIE-201ENST00000275015 PELP1Q8IZL8 1130 aaKnown RBP34.47■■■■□ 3.11
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms