RNA–Protein interactions for RNA: ENST00000424439.2

NHLRC4-201, Transcript of NHL repeat containing 4, humanhuman

APPRIS P1 TSL 3 BASIC

Gene NHLRC4, Length 2,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC4-201ENST00000424439 NISCHQ9Y2I1 1504 aa47.08■■■■■ 5.13
NHLRC4-201ENST00000424439 CCDC180Q9P1Z9 1646 aa40.72■■■■■ 4.11
NHLRC4-201ENST00000424439 SHROOM4Q9ULL8 1493 aa39.83■■■■□ 3.97
NHLRC4-201ENST00000424439 ZCCHC6Q5VYS8 1495 aaKnown RBP39.7■■■■□ 3.95
NHLRC4-201ENST00000424439 SUPT5HO00267 1087 aaKnown RBP39.39■■■■□ 3.9
NHLRC4-201ENST00000424439 ABCC9O60706 1549 aa39.37■■■■□ 3.89
NHLRC4-201ENST00000424439 DCAF1Q9Y4B6 1507 aa38.91■■■■□ 3.82
NHLRC4-201ENST00000424439 CHIC1Q5VXU3 224 aa38.85■■■■□ 3.81
NHLRC4-201ENST00000424439 MYO15BQ96JP2 1530 aa38.81■■■■□ 3.8
NHLRC4-201ENST00000424439 HRCP23327 699 aa38.77■■■■□ 3.8
NHLRC4-201ENST00000424439 DCAF8L2P0C7V8 631 aa38.66■■■■□ 3.78
NHLRC4-201ENST00000424439 PCGF6Q9BYE7 350 aa38.1■■■■□ 3.69
NHLRC4-201ENST00000424439 NACADO15069 1562 aa37.77■■■■□ 3.64
NHLRC4-201ENST00000424439 RB1CC1Q8TDY2 1594 aa37.75■■■■□ 3.63
NHLRC4-201ENST00000424439 SCRIBQ14160 1630 aa37.57■■■■□ 3.61
NHLRC4-201ENST00000424439 PPARGC1BQ86YN6 1023 aaKnown RBP37.54■■■■□ 3.6
NHLRC4-201ENST00000424439 LOC105371045A0A1W2PR82 267 aa37.52■■■■□ 3.6
NHLRC4-201ENST00000424439 TRIM26Q12899 539 aaPredicted RBP37.48■■■■□ 3.59
NHLRC4-201ENST00000424439 RSF1Q96T23 1441 aaPredicted RBP37.15■■■■□ 3.54
NHLRC4-201ENST00000424439 ZEB1P37275 1124 aaPredicted RBP37.09■■■■□ 3.53
NHLRC4-201ENST00000424439 UNC13AQ9UPW8 1703 aa36.99■■■■□ 3.51
NHLRC4-201ENST00000424439 TRIM41Q8WV44 630 aa36.81■■■■□ 3.48
NHLRC4-201ENST00000424439 PABPN1Q86U42 306 aaKnown RBP eCLIP36.74■■■■□ 3.47
NHLRC4-201ENST00000424439 BICRAQ9NZM4 1560 aa36.67■■■■□ 3.46
NHLRC4-201ENST00000424439 CECR2Q9BXF3 1484 aa36.55■■■■□ 3.44
NHLRC4-201ENST00000424439 MROH2BQ7Z745 1585 aa36.41■■■■□ 3.42
NHLRC4-201ENST00000424439 PELP1Q8IZL8 1130 aaKnown RBP36.38■■■■□ 3.41
NHLRC4-201ENST00000424439 DNAJC5BQ9UF47 199 aa36.36■■■■□ 3.41
NHLRC4-201ENST00000424439 FAM9AQ8IZU1 332 aaPredicted RBP36.29■■■■□ 3.4
NHLRC4-201ENST00000424439 BAZ1AQ9NRL2 1556 aaPredicted RBP36.28■■■■□ 3.4
NHLRC4-201ENST00000424439 WIZO95785 1651 aa36.16■■■■□ 3.38
NHLRC4-201ENST00000424439 EIF4G1Q04637 1599 aaKnown RBP36.08■■■■□ 3.37
NHLRC4-201ENST00000424439 SMARCA4P51532 1647 aa36.05■■■■□ 3.36
NHLRC4-201ENST00000424439 SCAF1Q9H7N4 1312 aaKnown RBP35.99■■■■□ 3.35
NHLRC4-201ENST00000424439 WRNQ14191 1432 aaPredicted RBP eCLIP35.79■■■■□ 3.32
NHLRC4-201ENST00000424439 TOP2AP11388 1531 aaKnown RBP35.78■■■■□ 3.32
NHLRC4-201ENST00000424439 EHMT2Q96KQ7 1210 aa35.75■■■■□ 3.31
NHLRC4-201ENST00000424439 CCER1Q8TC90 406 aaPredicted RBP35.64■■■■□ 3.3
NHLRC4-201ENST00000424439 CC2D2AQ9P2K1 1620 aa35.62■■■■□ 3.29
NHLRC4-201ENST00000424439 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP35.6■■■■□ 3.29
NHLRC4-201ENST00000424439 PEG3Q9GZU2 1588 aa35.59■■■■□ 3.29
NHLRC4-201ENST00000424439 ACIN1Q9UKV3 1341 aaKnown RBP35.56■■■■□ 3.28
NHLRC4-201ENST00000424439 SMARCA2P51531 1590 aa35.48■■■■□ 3.27
NHLRC4-201ENST00000424439 EEA1Q15075 1411 aa35.47■■■■□ 3.27
NHLRC4-201ENST00000424439 TNIKQ9UKE5 1360 aa35.46■■■■□ 3.27
NHLRC4-201ENST00000424439 CCDC88BA6NC98 1476 aa35.45■■■■□ 3.27
NHLRC4-201ENST00000424439 CEP162Q5TB80 1403 aa35.44■■■■□ 3.26
NHLRC4-201ENST00000424439 ABCC8Q09428 1581 aa35.42■■■■□ 3.26
NHLRC4-201ENST00000424439 DIEXFQ68CQ4 756 aaKnown RBP35.35■■■■□ 3.25
NHLRC4-201ENST00000424439 NEUROD1Q13562 356 aa35.32■■■■□ 3.24
NHLRC4-201ENST00000424439 CENPBP07199 599 aaPredicted RBP35.3■■■■□ 3.24
NHLRC4-201ENST00000424439 ATAD2BQ9ULI0 1458 aa35.29■■■■□ 3.24
NHLRC4-201ENST00000424439 SOGA1O94964 1423 aa35.22■■■■□ 3.23
NHLRC4-201ENST00000424439 CSRNP3Q8WYN3 585 aa35.16■■■■□ 3.22
NHLRC4-201ENST00000424439 GOLGA3Q08378 1498 aa35.12■■■■□ 3.21
NHLRC4-201ENST00000424439 BAZ1BQ9UIG0 1483 aaKnown RBP35.12■■■■□ 3.21
NHLRC4-201ENST00000424439 GTF3C3Q9Y5Q9 886 aa35.02■■■■□ 3.2
NHLRC4-201ENST00000424439 ZNF316A6NFI3 1004 aaPredicted RBP35.02■■■■□ 3.2
NHLRC4-201ENST00000424439 RUSC2Q8N2Y8 1516 aa35■■■■□ 3.19
NHLRC4-201ENST00000424439 KIF21BO75037 1637 aa34.92■■■■□ 3.18
NHLRC4-201ENST00000424439 UBTFP17480 764 aaKnown RBP34.91■■■■□ 3.18
NHLRC4-201ENST00000424439 CEP164Q9UPV0 1460 aa34.87■■■■□ 3.17
NHLRC4-201ENST00000424439 HMGXB3Q12766 1538 aa34.87■■■■□ 3.17
NHLRC4-201ENST00000424439 NCAPD3P42695 1498 aa34.87■■■■□ 3.17
NHLRC4-201ENST00000424439 TTBK1Q5TCY1 1321 aaPredicted RBP34.83■■■■□ 3.17
NHLRC4-201ENST00000424439 MYT1Q01538 1121 aa34.82■■■■□ 3.16
NHLRC4-201ENST00000424439 SYNJ1O43426 1573 aa34.68■■■■□ 3.14
NHLRC4-201ENST00000424439 VPS8Q8N3P4 1428 aa34.67■■■■□ 3.14
NHLRC4-201ENST00000424439 CLIP1P30622 1438 aa34.66■■■■□ 3.14
NHLRC4-201ENST00000424439 MIER1Q8N108 512 aa34.46■■■■□ 3.11
NHLRC4-201ENST00000424439 HNRNPUL2Q1KMD3 747 aaKnown RBP34.45■■■■□ 3.1
NHLRC4-201ENST00000424439 CLSPNQ9HAW4 1339 aa34.42■■■■□ 3.1
NHLRC4-201ENST00000424439 RAPGEF2Q9Y4G8 1499 aa34.39■■■■□ 3.1
NHLRC4-201ENST00000424439 APLP2Q06481 763 aa34.37■■■■□ 3.09
NHLRC4-201ENST00000424439 TOP2BQ02880 1626 aa34.32■■■■□ 3.08
NHLRC4-201ENST00000424439 YTHDC1Q96MU7 727 aaKnown RBP34.29■■■■□ 3.08
NHLRC4-201ENST00000424439 CFTRP13569 1480 aa34.29■■■■□ 3.08
NHLRC4-201ENST00000424439 ERICH3Q5RHP9 1530 aa34.27■■■■□ 3.08
NHLRC4-201ENST00000424439 BIVM-ERCC5R4GMW8 1640 aa34.23■■■■□ 3.07
NHLRC4-201ENST00000424439 PRDM2Q13029 1718 aa34.16■■■■□ 3.06
NHLRC4-201ENST00000424439 PRXQ9BXM0 1461 aa34.13■■■■□ 3.05
NHLRC4-201ENST00000424439 DHX57Q6P158 1386 aaKnown RBP34.12■■■■□ 3.05
NHLRC4-201ENST00000424439 ARAP1Q96P48 1450 aa34.07■■■■□ 3.04
NHLRC4-201ENST00000424439 NESP48681 1621 aa34.02■■■■□ 3.04
NHLRC4-201ENST00000424439 CADPSQ9ULU8 1353 aa34.02■■■■□ 3.04
NHLRC4-201ENST00000424439 CUX2O14529 1486 aa34.02■■■■□ 3.04
NHLRC4-201ENST00000424439 RRBP1Q9P2E9 1410 aaKnown RBP34.01■■■■□ 3.04
NHLRC4-201ENST00000424439 CUX1P39880 1505 aa34■■■■□ 3.03
NHLRC4-201ENST00000424439 ERCC6Q03468 1493 aa33.92■■■■□ 3.02
NHLRC4-201ENST00000424439 LAMC3Q9Y6N6 1575 aa33.87■■■■□ 3.01
NHLRC4-201ENST00000424439 KANK4Q5T7N3 995 aaPredicted RBP33.79■■■■□ 3
NHLRC4-201ENST00000424439 KIF27Q86VH2 1401 aa33.77■■■■□ 3
NHLRC4-201ENST00000424439 RANGAP1P46060 587 aaPredicted RBP33.76■■■□□ 2.99
NHLRC4-201ENST00000424439 CCNB3Q8WWL7 1395 aa33.72■■■□□ 2.99
NHLRC4-201ENST00000424439 SUPT16HQ9Y5B9 1047 aaKnown RBP33.68■■■□□ 2.98
NHLRC4-201ENST00000424439 MAP3K1Q13233 1512 aa33.66■■■□□ 2.98
NHLRC4-201ENST00000424439 ARHGAP35Q9NRY4 1499 aa33.66■■■□□ 2.98
NHLRC4-201ENST00000424439 FANCD2Q9BXW9 1451 aa33.65■■■□□ 2.98
NHLRC4-201ENST00000424439 KIF21AQ7Z4S6 1674 aa33.64■■■□□ 2.98
NHLRC4-201ENST00000424439 PDS5BQ9NTI5 1447 aa33.62■■■□□ 2.97
Retrieved 100 of 20,778 RNA–protein pairs in 6.8 ms