RNA–Protein interactions for RNA: ENST00000399538.2

DUSP8P4-201, Transcript of dual specificity phosphatase 8 pseudogene 4, humanhuman

BASIC

Gene DUSP8P4, Length 1,761 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUSP8P4-201ENST00000399538 NISCHQ9Y2I1 1504 aa53.44■■■■■ 6.14
DUSP8P4-201ENST00000399538 CCDC180Q9P1Z9 1646 aa46.34■■■■■ 5.01
DUSP8P4-201ENST00000399538 ZCCHC6Q5VYS8 1495 aaKnown RBP45.07■■■■■ 4.8
DUSP8P4-201ENST00000399538 DCAF1Q9Y4B6 1507 aa44.27■■■■■ 4.68
DUSP8P4-201ENST00000399538 SHROOM4Q9ULL8 1493 aa43.91■■■■■ 4.62
DUSP8P4-201ENST00000399538 DCAF8L2P0C7V8 631 aa43.68■■■■■ 4.58
DUSP8P4-201ENST00000399538 MYO15BQ96JP2 1530 aa43.5■■■■■ 4.55
DUSP8P4-201ENST00000399538 ABCC9O60706 1549 aa43.04■■■■■ 4.48
DUSP8P4-201ENST00000399538 NACADO15069 1562 aa42.97■■■■■ 4.47
DUSP8P4-201ENST00000399538 SCRIBQ14160 1630 aa42.61■■■■■ 4.41
DUSP8P4-201ENST00000399538 SUPT5HO00267 1087 aaKnown RBP42.58■■■■■ 4.41
DUSP8P4-201ENST00000399538 RB1CC1Q8TDY2 1594 aa42.41■■■■■ 4.38
DUSP8P4-201ENST00000399538 RSF1Q96T23 1441 aaPredicted RBP41.7■■■■■ 4.27
DUSP8P4-201ENST00000399538 UNC13AQ9UPW8 1703 aa41.6■■■■■ 4.25
DUSP8P4-201ENST00000399538 CECR2Q9BXF3 1484 aa41.41■■■■■ 4.22
DUSP8P4-201ENST00000399538 MROH2BQ7Z745 1585 aa41.29■■■■■ 4.2
DUSP8P4-201ENST00000399538 CHIC1Q5VXU3 224 aa41.22■■■■■ 4.19
DUSP8P4-201ENST00000399538 BAZ1AQ9NRL2 1556 aaPredicted RBP41.22■■■■■ 4.19
DUSP8P4-201ENST00000399538 BICRAQ9NZM4 1560 aa41.13■■■■■ 4.17
DUSP8P4-201ENST00000399538 WIZO95785 1651 aa40.99■■■■■ 4.15
DUSP8P4-201ENST00000399538 SMARCA4P51532 1647 aa40.95■■■■■ 4.15
DUSP8P4-201ENST00000399538 PABPN1Q86U42 306 aaKnown RBP eCLIP40.67■■■■■ 4.1
DUSP8P4-201ENST00000399538 TOP2AP11388 1531 aaKnown RBP40.63■■■■■ 4.09
DUSP8P4-201ENST00000399538 PEG3Q9GZU2 1588 aa40.47■■■■■ 4.07
DUSP8P4-201ENST00000399538 EIF4G1Q04637 1599 aaKnown RBP40.27■■■■■ 4.04
DUSP8P4-201ENST00000399538 SMARCA2P51531 1590 aa40.26■■■■■ 4.03
DUSP8P4-201ENST00000399538 CCDC88BA6NC98 1476 aa40.17■■■■■ 4.02
DUSP8P4-201ENST00000399538 ATAD2BQ9ULI0 1458 aa40.07■■■■■ 4.01
DUSP8P4-201ENST00000399538 TRIM41Q8WV44 630 aa40.05■■■■■ 4
DUSP8P4-201ENST00000399538 BAZ1BQ9UIG0 1483 aaKnown RBP39.88■■■■□ 3.97
DUSP8P4-201ENST00000399538 HMGXB3Q12766 1538 aa39.67■■■■□ 3.94
DUSP8P4-201ENST00000399538 NCAPD3P42695 1498 aa39.63■■■■□ 3.94
DUSP8P4-201ENST00000399538 LOC105371045A0A1W2PR82 267 aa39.59■■■■□ 3.93
DUSP8P4-201ENST00000399538 ABCC8Q09428 1581 aa39.53■■■■□ 3.92
DUSP8P4-201ENST00000399538 FAM9AQ8IZU1 332 aaPredicted RBP39.25■■■■□ 3.87
DUSP8P4-201ENST00000399538 WRNQ14191 1432 aaPredicted RBP eCLIP39.22■■■■□ 3.87
DUSP8P4-201ENST00000399538 EEA1Q15075 1411 aa39.1■■■■□ 3.85
DUSP8P4-201ENST00000399538 SYNJ1O43426 1573 aa39.05■■■■□ 3.84
DUSP8P4-201ENST00000399538 CC2D2AQ9P2K1 1620 aa39.03■■■■□ 3.84
DUSP8P4-201ENST00000399538 CFTRP13569 1480 aa38.94■■■■□ 3.82
DUSP8P4-201ENST00000399538 SOGA1O94964 1423 aa38.92■■■■□ 3.82
DUSP8P4-201ENST00000399538 TOP2BQ02880 1626 aa38.87■■■■□ 3.81
DUSP8P4-201ENST00000399538 PRDM2Q13029 1718 aa38.86■■■■□ 3.81
DUSP8P4-201ENST00000399538 BIVM-ERCC5R4GMW8 1640 aa38.85■■■■□ 3.81
DUSP8P4-201ENST00000399538 RUSC2Q8N2Y8 1516 aa38.72■■■■□ 3.79
DUSP8P4-201ENST00000399538 CSRNP3Q8WYN3 585 aa38.71■■■■□ 3.79
DUSP8P4-201ENST00000399538 CADPSQ9ULU8 1353 aa38.63■■■■□ 3.77
DUSP8P4-201ENST00000399538 EHMT2Q96KQ7 1210 aa38.59■■■■□ 3.77
DUSP8P4-201ENST00000399538 CUX1P39880 1505 aa38.57■■■■□ 3.76
DUSP8P4-201ENST00000399538 TNIKQ9UKE5 1360 aa38.56■■■■□ 3.76
DUSP8P4-201ENST00000399538 KIF21BO75037 1637 aa38.56■■■■□ 3.76
DUSP8P4-201ENST00000399538 GOLGA3Q08378 1498 aa38.55■■■■□ 3.76
DUSP8P4-201ENST00000399538 PCGF6Q9BYE7 350 aa38.52■■■■□ 3.76
DUSP8P4-201ENST00000399538 CEP164Q9UPV0 1460 aa38.49■■■■□ 3.75
DUSP8P4-201ENST00000399538 TRIM26Q12899 539 aaPredicted RBP38.44■■■■□ 3.74
DUSP8P4-201ENST00000399538 CEP162Q5TB80 1403 aa38.37■■■■□ 3.73
DUSP8P4-201ENST00000399538 UBTFP17480 764 aaKnown RBP38.21■■■■□ 3.71
DUSP8P4-201ENST00000399538 FANCD2Q9BXW9 1451 aa38.2■■■■□ 3.71
DUSP8P4-201ENST00000399538 LAMC3Q9Y6N6 1575 aa38.19■■■■□ 3.7
DUSP8P4-201ENST00000399538 KIF27Q86VH2 1401 aa38.18■■■■□ 3.7
DUSP8P4-201ENST00000399538 ERICH3Q5RHP9 1530 aa38.17■■■■□ 3.7
DUSP8P4-201ENST00000399538 PRXQ9BXM0 1461 aa38.13■■■■□ 3.69
DUSP8P4-201ENST00000399538 RAPGEF2Q9Y4G8 1499 aa38.12■■■■□ 3.69
DUSP8P4-201ENST00000399538 HRCP23327 699 aa38.06■■■■□ 3.68
DUSP8P4-201ENST00000399538 DNMBPQ6XZF7 1577 aa38.04■■■■□ 3.68
DUSP8P4-201ENST00000399538 FGD5Q6ZNL6 1462 aa38.02■■■■□ 3.68
DUSP8P4-201ENST00000399538 NESP48681 1621 aa38.02■■■■□ 3.68
DUSP8P4-201ENST00000399538 CLIP1P30622 1438 aa37.91■■■■□ 3.66
DUSP8P4-201ENST00000399538 TOPBP1Q92547 1522 aa37.89■■■■□ 3.66
DUSP8P4-201ENST00000399538 CUX2O14529 1486 aa37.89■■■■□ 3.66
DUSP8P4-201ENST00000399538 PDS5BQ9NTI5 1447 aa37.82■■■■□ 3.65
DUSP8P4-201ENST00000399538 POLA1P09884 1462 aaPredicted RBP37.75■■■■□ 3.63
DUSP8P4-201ENST00000399538 ABCA10Q8WWZ4 1543 aa37.75■■■■□ 3.63
DUSP8P4-201ENST00000399538 IGF1RP08069 1367 aa37.75■■■■□ 3.63
DUSP8P4-201ENST00000399538 VPS8Q8N3P4 1428 aa37.72■■■■□ 3.63
DUSP8P4-201ENST00000399538 DNAJC5BQ9UF47 199 aa37.7■■■■□ 3.63
DUSP8P4-201ENST00000399538 URB2Q14146 1524 aaKnown RBP37.7■■■■□ 3.63
DUSP8P4-201ENST00000399538 KIF21AQ7Z4S6 1674 aa37.63■■■■□ 3.62
DUSP8P4-201ENST00000399538 PPARGC1BQ86YN6 1023 aaKnown RBP37.6■■■■□ 3.61
DUSP8P4-201ENST00000399538 WDR97A6NE52 1622 aa37.6■■■■□ 3.61
DUSP8P4-201ENST00000399538 RAD54L2Q9Y4B4 1467 aa37.59■■■■□ 3.61
DUSP8P4-201ENST00000399538 CARMIL1Q5VZK9 1371 aa37.57■■■■□ 3.6
DUSP8P4-201ENST00000399538 ARAP1Q96P48 1450 aa37.49■■■■□ 3.59
DUSP8P4-201ENST00000399538 CUL7Q14999 1698 aa37.48■■■■□ 3.59
DUSP8P4-201ENST00000399538 ABCA5Q8WWZ7 1642 aa37.4■■■■□ 3.58
DUSP8P4-201ENST00000399538 ARHGAP35Q9NRY4 1499 aa37.35■■■■□ 3.57
DUSP8P4-201ENST00000399538 MRC2Q9UBG0 1479 aa37.32■■■■□ 3.56
DUSP8P4-201ENST00000399538 ZEB1P37275 1124 aaPredicted RBP37.31■■■■□ 3.56
DUSP8P4-201ENST00000399538 TARBP1Q13395 1621 aaKnown RBP37.29■■■■□ 3.56
DUSP8P4-201ENST00000399538 RANGAP1P46060 587 aaPredicted RBP37.28■■■■□ 3.56
DUSP8P4-201ENST00000399538 APLP2Q06481 763 aa37.26■■■■□ 3.56
DUSP8P4-201ENST00000399538 GAPVD1Q14C86 1478 aa37.23■■■■□ 3.55
DUSP8P4-201ENST00000399538 CTTNBP2Q8WZ74 1663 aa37.15■■■■□ 3.54
DUSP8P4-201ENST00000399538 TTBK1Q5TCY1 1321 aaPredicted RBP37.15■■■■□ 3.54
DUSP8P4-201ENST00000399538 TDRD9Q8NDG6 1382 aaKnown RBP37.13■■■■□ 3.53
DUSP8P4-201ENST00000399538 WDR62O43379 1518 aa37.13■■■■□ 3.53
DUSP8P4-201ENST00000399538 EFCAB5A4FU69 1503 aa37.07■■■■□ 3.53
DUSP8P4-201ENST00000399538 PBRM1Q86U86 1689 aa37.02■■■■□ 3.52
DUSP8P4-201ENST00000399538 MAP3K1Q13233 1512 aa37.01■■■■□ 3.52
DUSP8P4-201ENST00000399538 IFT140Q96RY7 1462 aa36.98■■■■□ 3.51
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms