RNA–Protein interactions for RNA: ENST00000512648.5

SPOCK3-221, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3, humanhuman

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Gene SPOCK3, Length 1,456 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK3-221ENST00000512648 NISCHQ9Y2I1 1504 aa55.16■■■■■ 6.42
SPOCK3-221ENST00000512648 CCDC180Q9P1Z9 1646 aa48.07■■■■■ 5.29
SPOCK3-221ENST00000512648 ZCCHC6Q5VYS8 1495 aaKnown RBP46.33■■■■■ 5.01
SPOCK3-221ENST00000512648 DCAF1Q9Y4B6 1507 aa45.76■■■■■ 4.92
SPOCK3-221ENST00000512648 DCAF8L2P0C7V8 631 aa45.29■■■■■ 4.84
SPOCK3-221ENST00000512648 MYO15BQ96JP2 1530 aa45.26■■■■■ 4.84
SPOCK3-221ENST00000512648 ABCC9O60706 1549 aa45.26■■■■■ 4.84
SPOCK3-221ENST00000512648 NACADO15069 1562 aa44.83■■■■■ 4.77
SPOCK3-221ENST00000512648 SHROOM4Q9ULL8 1493 aa44.7■■■■■ 4.75
SPOCK3-221ENST00000512648 RB1CC1Q8TDY2 1594 aa44.36■■■■■ 4.69
SPOCK3-221ENST00000512648 SCRIBQ14160 1630 aa44■■■■■ 4.63
SPOCK3-221ENST00000512648 UNC13AQ9UPW8 1703 aa43.25■■■■■ 4.51
SPOCK3-221ENST00000512648 SUPT5HO00267 1087 aaKnown RBP43.12■■■■■ 4.49
SPOCK3-221ENST00000512648 BICRAQ9NZM4 1560 aa42.99■■■■■ 4.47
SPOCK3-221ENST00000512648 RSF1Q96T23 1441 aaPredicted RBP42.79■■■■■ 4.44
SPOCK3-221ENST00000512648 CECR2Q9BXF3 1484 aa42.75■■■■■ 4.43
SPOCK3-221ENST00000512648 PABPN1Q86U42 306 aaKnown RBP eCLIP42.68■■■■■ 4.42
SPOCK3-221ENST00000512648 BAZ1AQ9NRL2 1556 aaPredicted RBP42.58■■■■■ 4.41
SPOCK3-221ENST00000512648 MROH2BQ7Z745 1585 aa42.52■■■■■ 4.4
SPOCK3-221ENST00000512648 SMARCA4P51532 1647 aa42.31■■■■■ 4.36
SPOCK3-221ENST00000512648 WIZO95785 1651 aa42.09■■■■■ 4.33
SPOCK3-221ENST00000512648 PEG3Q9GZU2 1588 aa41.94■■■■■ 4.31
SPOCK3-221ENST00000512648 TOP2AP11388 1531 aaKnown RBP41.8■■■■■ 4.28
SPOCK3-221ENST00000512648 ATAD2BQ9ULI0 1458 aa41.69■■■■■ 4.26
SPOCK3-221ENST00000512648 SMARCA2P51531 1590 aa41.68■■■■■ 4.26
SPOCK3-221ENST00000512648 EIF4G1Q04637 1599 aaKnown RBP41.67■■■■■ 4.26
SPOCK3-221ENST00000512648 CHIC1Q5VXU3 224 aa41.47■■■■■ 4.23
SPOCK3-221ENST00000512648 NCAPD3P42695 1498 aa41.42■■■■■ 4.22
SPOCK3-221ENST00000512648 BAZ1BQ9UIG0 1483 aaKnown RBP41.39■■■■■ 4.22
SPOCK3-221ENST00000512648 CCDC88BA6NC98 1476 aa41.36■■■■■ 4.21
SPOCK3-221ENST00000512648 HMGXB3Q12766 1538 aa41.3■■■■■ 4.2
SPOCK3-221ENST00000512648 CC2D2AQ9P2K1 1620 aa41■■■■■ 4.15
SPOCK3-221ENST00000512648 TRIM41Q8WV44 630 aa40.68■■■■■ 4.1
SPOCK3-221ENST00000512648 CFTRP13569 1480 aa40.46■■■■■ 4.07
SPOCK3-221ENST00000512648 ABCC8Q09428 1581 aa40.33■■■■■ 4.05
SPOCK3-221ENST00000512648 CADPSQ9ULU8 1353 aa40.32■■■■■ 4.04
SPOCK3-221ENST00000512648 WRNQ14191 1432 aaPredicted RBP eCLIP40.26■■■■■ 4.03
SPOCK3-221ENST00000512648 PRDM2Q13029 1718 aa40.07■■■■■ 4
SPOCK3-221ENST00000512648 SYNJ1O43426 1573 aa39.98■■■■□ 3.99
SPOCK3-221ENST00000512648 DNAJC5BQ9UF47 199 aa39.93■■■■□ 3.98
SPOCK3-221ENST00000512648 TOP2BQ02880 1626 aa39.91■■■■□ 3.98
SPOCK3-221ENST00000512648 LAMC3Q9Y6N6 1575 aa39.91■■■■□ 3.98
SPOCK3-221ENST00000512648 BIVM-ERCC5R4GMW8 1640 aa39.86■■■■□ 3.97
SPOCK3-221ENST00000512648 EEA1Q15075 1411 aa39.84■■■■□ 3.97
SPOCK3-221ENST00000512648 FANCD2Q9BXW9 1451 aa39.77■■■■□ 3.96
SPOCK3-221ENST00000512648 CUX1P39880 1505 aa39.77■■■■□ 3.96
SPOCK3-221ENST00000512648 LOC105371045A0A1W2PR82 267 aa39.75■■■■□ 3.95
SPOCK3-221ENST00000512648 NESP48681 1621 aa39.74■■■■□ 3.95
SPOCK3-221ENST00000512648 FAM9AQ8IZU1 332 aaPredicted RBP39.73■■■■□ 3.95
SPOCK3-221ENST00000512648 SOGA1O94964 1423 aa39.69■■■■□ 3.94
SPOCK3-221ENST00000512648 PDS5BQ9NTI5 1447 aa39.65■■■■□ 3.94
SPOCK3-221ENST00000512648 CSRNP3Q8WYN3 585 aa39.54■■■■□ 3.92
SPOCK3-221ENST00000512648 CEP164Q9UPV0 1460 aa39.51■■■■□ 3.92
SPOCK3-221ENST00000512648 RUSC2Q8N2Y8 1516 aa39.5■■■■□ 3.91
SPOCK3-221ENST00000512648 DNMBPQ6XZF7 1577 aa39.44■■■■□ 3.9
SPOCK3-221ENST00000512648 TOPBP1Q92547 1522 aa39.35■■■■□ 3.89
SPOCK3-221ENST00000512648 FGD5Q6ZNL6 1462 aa39.32■■■■□ 3.88
SPOCK3-221ENST00000512648 KIF27Q86VH2 1401 aa39.27■■■■□ 3.88
SPOCK3-221ENST00000512648 URB2Q14146 1524 aaKnown RBP39.26■■■■□ 3.87
SPOCK3-221ENST00000512648 KIF21AQ7Z4S6 1674 aa39.2■■■■□ 3.87
SPOCK3-221ENST00000512648 KIF21BO75037 1637 aa39.17■■■■□ 3.86
SPOCK3-221ENST00000512648 POLA1P09884 1462 aaPredicted RBP39.15■■■■□ 3.86
SPOCK3-221ENST00000512648 GOLGA3Q08378 1498 aa39.15■■■■□ 3.86
SPOCK3-221ENST00000512648 TNIKQ9UKE5 1360 aa39.12■■■■□ 3.85
SPOCK3-221ENST00000512648 ABCA10Q8WWZ4 1543 aa39.08■■■■□ 3.85
SPOCK3-221ENST00000512648 CUX2O14529 1486 aa39.07■■■■□ 3.85
SPOCK3-221ENST00000512648 MRC2Q9UBG0 1479 aa39.07■■■■□ 3.85
SPOCK3-221ENST00000512648 PRXQ9BXM0 1461 aa39.05■■■■□ 3.84
SPOCK3-221ENST00000512648 EHMT2Q96KQ7 1210 aa38.99■■■■□ 3.83
SPOCK3-221ENST00000512648 ERICH3Q5RHP9 1530 aa38.96■■■■□ 3.83
SPOCK3-221ENST00000512648 RAD54L2Q9Y4B4 1467 aa38.96■■■■□ 3.83
SPOCK3-221ENST00000512648 IGF1RP08069 1367 aa38.95■■■■□ 3.83
SPOCK3-221ENST00000512648 UBTFP17480 764 aaKnown RBP38.9■■■■□ 3.82
SPOCK3-221ENST00000512648 RAPGEF2Q9Y4G8 1499 aa38.88■■■■□ 3.82
SPOCK3-221ENST00000512648 WDR62O43379 1518 aa38.87■■■■□ 3.81
SPOCK3-221ENST00000512648 ERCC6Q03468 1493 aa38.82■■■■□ 3.81
SPOCK3-221ENST00000512648 WDR97A6NE52 1622 aa38.81■■■■□ 3.8
SPOCK3-221ENST00000512648 CEP162Q5TB80 1403 aa38.78■■■■□ 3.8
SPOCK3-221ENST00000512648 TARBP1Q13395 1621 aaKnown RBP38.75■■■■□ 3.79
SPOCK3-221ENST00000512648 CARMIL1Q5VZK9 1371 aa38.72■■■■□ 3.79
SPOCK3-221ENST00000512648 ABCA5Q8WWZ7 1642 aa38.67■■■■□ 3.78
SPOCK3-221ENST00000512648 THOC2Q8NI27 1593 aaKnown RBP38.66■■■■□ 3.78
SPOCK3-221ENST00000512648 IFT140Q96RY7 1462 aa38.65■■■■□ 3.78
SPOCK3-221ENST00000512648 GAPVD1Q14C86 1478 aa38.62■■■■□ 3.77
SPOCK3-221ENST00000512648 TDRD9Q8NDG6 1382 aaKnown RBP38.6■■■■□ 3.77
SPOCK3-221ENST00000512648 CUL7Q14999 1698 aa38.56■■■■□ 3.76
SPOCK3-221ENST00000512648 CLIP1P30622 1438 aa38.49■■■■□ 3.75
SPOCK3-221ENST00000512648 GRIN2BQ13224 1484 aa38.35■■■■□ 3.73
SPOCK3-221ENST00000512648 AQRO60306 1485 aaKnown RBP eCLIP38.35■■■■□ 3.73
SPOCK3-221ENST00000512648 ZNF608Q9ULD9 1512 aaPredicted RBP38.29■■■■□ 3.72
SPOCK3-221ENST00000512648 FHAD1B1AJZ9 1412 aa38.27■■■■□ 3.72
SPOCK3-221ENST00000512648 PBRM1Q86U86 1689 aa38.25■■■■□ 3.71
SPOCK3-221ENST00000512648 VPS8Q8N3P4 1428 aa38.21■■■■□ 3.71
SPOCK3-221ENST00000512648 ADAMTS12P58397 1594 aa38.14■■■■□ 3.7
SPOCK3-221ENST00000512648 EIF4G3O43432 1585 aaKnown RBP38.14■■■■□ 3.7
SPOCK3-221ENST00000512648 TRIM26Q12899 539 aaPredicted RBP38.11■■■■□ 3.69
SPOCK3-221ENST00000512648 ARHGAP35Q9NRY4 1499 aa38.11■■■■□ 3.69
SPOCK3-221ENST00000512648 ARAP1Q96P48 1450 aa38.09■■■■□ 3.69
SPOCK3-221ENST00000512648 MAGI1Q96QZ7 1491 aaPredicted RBP38.04■■■■□ 3.68
SPOCK3-221ENST00000512648 RANGAP1P46060 587 aaPredicted RBP38.03■■■■□ 3.68
Retrieved 100 of 20,778 RNA–protein pairs in 127.8 ms