RNA–Protein interactions for RNA: ENST00000520161.5

RBPMS-209, Transcript of RNA binding protein, mRNA processing factor, humanhuman

TSL 2 BASIC

Gene RBPMS, Length 842 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBPMS-209ENST00000520161 NISCHQ9Y2I1 1504 aa62.81■■■■■ 7.64
RBPMS-209ENST00000520161 ABCC9O60706 1549 aa57.69■■■■■ 6.83
RBPMS-209ENST00000520161 CCDC180Q9P1Z9 1646 aa56.85■■■■■ 6.69
RBPMS-209ENST00000520161 DNAJC5BQ9UF47 199 aa54.78■■■■■ 6.36
RBPMS-209ENST00000520161 RB1CC1Q8TDY2 1594 aa54.57■■■■■ 6.33
RBPMS-209ENST00000520161 NACADO15069 1562 aa53.95■■■■■ 6.23
RBPMS-209ENST00000520161 PABPN1Q86U42 306 aaKnown RBP eCLIP53.53■■■■■ 6.16
RBPMS-209ENST00000520161 DCAF8L2P0C7V8 631 aa53.51■■■■■ 6.16
RBPMS-209ENST00000520161 UNC13AQ9UPW8 1703 aa53.27■■■■■ 6.12
RBPMS-209ENST00000520161 BICRAQ9NZM4 1560 aa52.88■■■■■ 6.06
RBPMS-209ENST00000520161 MYO15BQ96JP2 1530 aa52.86■■■■■ 6.05
RBPMS-209ENST00000520161 SHROOM4Q9ULL8 1493 aa52.2■■■■■ 5.95
RBPMS-209ENST00000520161 CECR2Q9BXF3 1484 aa52.08■■■■■ 5.93
RBPMS-209ENST00000520161 CC2D2AQ9P2K1 1620 aa52.07■■■■■ 5.93
RBPMS-209ENST00000520161 ZCCHC6Q5VYS8 1495 aaKnown RBP51.86■■■■■ 5.89
RBPMS-209ENST00000520161 DCAF1Q9Y4B6 1507 aa51.84■■■■■ 5.89
RBPMS-209ENST00000520161 EIF4G1Q04637 1599 aaKnown RBP51.74■■■■■ 5.87
RBPMS-209ENST00000520161 SCRIBQ14160 1630 aa51.72■■■■■ 5.87
RBPMS-209ENST00000520161 DNAJC5Q9H3Z4 198 aa51.08■■■■■ 5.77
RBPMS-209ENST00000520161 CUX2O14529 1486 aa50.14■■■■■ 5.62
RBPMS-209ENST00000520161 ERCC6Q03468 1493 aa49.98■■■■■ 5.59
RBPMS-209ENST00000520161 NCAPD3P42695 1498 aa49.75■■■■■ 5.55
RBPMS-209ENST00000520161 ATAD2BQ9ULI0 1458 aa49.47■■■■■ 5.51
RBPMS-209ENST00000520161 SMARCA2P51531 1590 aa49.36■■■■■ 5.49
RBPMS-209ENST00000520161 HMGXB3Q12766 1538 aa49.34■■■■■ 5.49
RBPMS-209ENST00000520161 NESP48681 1621 aa49.24■■■■■ 5.47
RBPMS-209ENST00000520161 SMARCA4P51532 1647 aa49.23■■■■■ 5.47
RBPMS-209ENST00000520161 BAZ1BQ9UIG0 1483 aaKnown RBP49.02■■■■■ 5.44
RBPMS-209ENST00000520161 THOC2Q8NI27 1593 aaKnown RBP48.98■■■■■ 5.43
RBPMS-209ENST00000520161 BAZ1AQ9NRL2 1556 aaPredicted RBP48.88■■■■■ 5.42
RBPMS-209ENST00000520161 LAMC3Q9Y6N6 1575 aa48.85■■■■■ 5.41
RBPMS-209ENST00000520161 PEG3Q9GZU2 1588 aa48.73■■■■■ 5.39
RBPMS-209ENST00000520161 KIF21AQ7Z4S6 1674 aa48.66■■■■■ 5.38
RBPMS-209ENST00000520161 PDS5BQ9NTI5 1447 aa48.62■■■■■ 5.37
RBPMS-209ENST00000520161 TRIM41Q8WV44 630 aa48.56■■■■■ 5.36
RBPMS-209ENST00000520161 MROH2BQ7Z745 1585 aa48.35■■■■■ 5.33
RBPMS-209ENST00000520161 MRC2Q9UBG0 1479 aa48.23■■■■■ 5.31
RBPMS-209ENST00000520161 CADPSQ9ULU8 1353 aa48.21■■■■■ 5.31
RBPMS-209ENST00000520161 WDR62O43379 1518 aa48.12■■■■■ 5.29
RBPMS-209ENST00000520161 CEP164Q9UPV0 1460 aa47.87■■■■■ 5.25
RBPMS-209ENST00000520161 WIZO95785 1651 aa47.77■■■■■ 5.24
RBPMS-209ENST00000520161 OSCARQ8IYS5 282 aa47.7■■■■■ 5.23
RBPMS-209ENST00000520161 FANCD2Q9BXW9 1451 aa47.7■■■■■ 5.23
RBPMS-209ENST00000520161 CFTRP13569 1480 aa47.46■■■■■ 5.19
RBPMS-209ENST00000520161 URB2Q14146 1524 aaKnown RBP47.31■■■■■ 5.16
RBPMS-209ENST00000520161 RIMBP3CA6NJZ7 1639 aa47.16■■■■■ 5.14
RBPMS-209ENST00000520161 RIMBP3BA6NNM3 1639 aa47.16■■■■■ 5.14
RBPMS-209ENST00000520161 RIMBP3Q9UFD9 1639 aa47.16■■■■■ 5.14
RBPMS-209ENST00000520161 TOP2AP11388 1531 aaKnown RBP47.13■■■■■ 5.14
RBPMS-209ENST00000520161 PRDM2Q13029 1718 aa47.02■■■■■ 5.12
RBPMS-209ENST00000520161 RSF1Q96T23 1441 aaPredicted RBP47.01■■■■■ 5.12
RBPMS-209ENST00000520161 IFT140Q96RY7 1462 aa46.93■■■■■ 5.1
RBPMS-209ENST00000520161 ARHGEF11O15085 1522 aa46.91■■■■■ 5.1
RBPMS-209ENST00000520161 ZNF608Q9ULD9 1512 aaPredicted RBP46.87■■■■■ 5.09
RBPMS-209ENST00000520161 TOPBP1Q92547 1522 aa46.67■■■■■ 5.06
RBPMS-209ENST00000520161 EIF4G3O43432 1585 aaKnown RBP46.64■■■■■ 5.06
RBPMS-209ENST00000520161 CYB5RLQ6IPT4 315 aa46.63■■■■■ 5.06
RBPMS-209ENST00000520161 ABCC8Q09428 1581 aa46.59■■■■■ 5.05
RBPMS-209ENST00000520161 CCDC88BA6NC98 1476 aa46.56■■■■■ 5.04
RBPMS-209ENST00000520161 TRHP20396 242 aaPredicted RBP46.5■■■■■ 5.03
RBPMS-209ENST00000520161 CHD1O14646 1710 aa46.48■■■■■ 5.03
RBPMS-209ENST00000520161 DNMBPQ6XZF7 1577 aa46.46■■■■■ 5.03
RBPMS-209ENST00000520161 AQRO60306 1485 aaKnown RBP eCLIP46.35■■■■■ 5.013e-6■■■■□ 25.5
RBPMS-209ENST00000520161 ARAP1Q96P48 1450 aa46.35■■■■■ 5.01
RBPMS-209ENST00000520161 FBLN2P98095 1184 aa46.33■■■■■ 5.01
RBPMS-209ENST00000520161 TARBP1Q13395 1621 aaKnown RBP46.31■■■■■ 5
RBPMS-209ENST00000520161 POLA1P09884 1462 aaPredicted RBP46.12■■■■■ 4.97
RBPMS-209ENST00000520161 RAD54L2Q9Y4B4 1467 aa45.96■■■■■ 4.95
RBPMS-209ENST00000520161 SOGA1O94964 1423 aa45.93■■■■■ 4.94
RBPMS-209ENST00000520161 TDRD9Q8NDG6 1382 aaKnown RBP45.92■■■■■ 4.94
RBPMS-209ENST00000520161 SNAPC4Q5SXM2 1469 aa45.9■■■■■ 4.94
RBPMS-209ENST00000520161 AEBP2Q6ZN18 517 aaPredicted RBP45.88■■■■■ 4.94
RBPMS-209ENST00000520161 WDR97A6NE52 1622 aa45.88■■■■■ 4.93
RBPMS-209ENST00000520161 SYNJ1O43426 1573 aa45.87■■■■■ 4.93
RBPMS-209ENST00000520161 CLASP1Q7Z460 1538 aa45.87■■■■■ 4.93
RBPMS-209ENST00000520161 CHMP7Q8WUX9 453 aaPredicted RBP45.84■■■■■ 4.93
RBPMS-209ENST00000520161 MAGI1Q96QZ7 1491 aaPredicted RBP45.76■■■■■ 4.92
RBPMS-209ENST00000520161 FGD5Q6ZNL6 1462 aa45.73■■■■■ 4.91
RBPMS-209ENST00000520161 GRIN2BQ13224 1484 aa45.66■■■■■ 4.9
RBPMS-209ENST00000520161 SYNJ2O15056 1496 aa45.61■■■■■ 4.89
RBPMS-209ENST00000520161 CUX1P39880 1505 aa45.5■■■■■ 4.87
RBPMS-209ENST00000520161 GAPVD1Q14C86 1478 aa45.49■■■■■ 4.87
RBPMS-209ENST00000520161 PBRM1Q86U86 1689 aa45.44■■■■■ 4.87
RBPMS-209ENST00000520161 ABCA5Q8WWZ7 1642 aa45.17■■■■■ 4.82
RBPMS-209ENST00000520161 ABCA10Q8WWZ4 1543 aa45.15■■■■■ 4.82
RBPMS-209ENST00000520161 GRIN2AQ12879 1464 aa45.05■■■■■ 4.8
RBPMS-209ENST00000520161 ERCC6L2Q5T890 1561 aa45.04■■■■■ 4.8
RBPMS-209ENST00000520161 CEP170Q5SW79 1584 aa44.97■■■■■ 4.79
RBPMS-209ENST00000520161 ADAMTS12P58397 1594 aa44.91■■■■■ 4.78
RBPMS-209ENST00000520161 NUP160Q12769 1436 aa44.9■■■■■ 4.78
RBPMS-209ENST00000520161 WRNQ14191 1432 aaPredicted RBP eCLIP44.83■■■■■ 4.77
RBPMS-209ENST00000520161 SHROOM2Q13796 1616 aa44.83■■■■■ 4.77
RBPMS-209ENST00000520161 FHAD1B1AJZ9 1412 aa44.75■■■■■ 4.76
RBPMS-209ENST00000520161 KIF13AQ9H1H9 1805 aa44.75■■■■■ 4.75
RBPMS-209ENST00000520161 ERICH3Q5RHP9 1530 aa44.6■■■■■ 4.73
RBPMS-209ENST00000520161 BIVM-ERCC5R4GMW8 1640 aa44.59■■■■■ 4.73
RBPMS-209ENST00000520161 PRG4Q92954 1404 aaPredicted RBP44.58■■■■■ 4.73
RBPMS-209ENST00000520161 TOP2BQ02880 1626 aa44.57■■■■■ 4.73
RBPMS-209ENST00000520161 NPM1P06748 294 aaKnown RBP eCLIP44.46■■■■■ 4.71
RBPMS-209ENST00000520161 JPH4Q96JJ6 628 aa44.46■■■■■ 4.71
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms