RNA–Protein interactions for RNA: ENST00000543589.5

PXMP2-205, Transcript of peroxisomal membrane protein 2, humanhuman

TSL 3 BASIC

Gene PXMP2, Length 632 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PXMP2-205ENST00000543589 NISCHQ9Y2I1 1504 aa60.83■■■■■ 7.33
PXMP2-205ENST00000543589 CCDC180Q9P1Z9 1646 aa54.41■■■■■ 6.3
PXMP2-205ENST00000543589 ABCC9O60706 1549 aa53.97■■■■■ 6.23
PXMP2-205ENST00000543589 RB1CC1Q8TDY2 1594 aa51.58■■■■■ 5.85
PXMP2-205ENST00000543589 NACADO15069 1562 aa51.34■■■■■ 5.81
PXMP2-205ENST00000543589 DCAF8L2P0C7V8 631 aa51.1■■■■■ 5.77
PXMP2-205ENST00000543589 MYO15BQ96JP2 1530 aa50.81■■■■■ 5.72
PXMP2-205ENST00000543589 ZCCHC6Q5VYS8 1495 aaKnown RBP50.52■■■■■ 5.68
PXMP2-205ENST00000543589 UNC13AQ9UPW8 1703 aa50.36■■■■■ 5.65
PXMP2-205ENST00000543589 DCAF1Q9Y4B6 1507 aa50.31■■■■■ 5.64
PXMP2-205ENST00000543589 PABPN1Q86U42 306 aaKnown RBP eCLIP50.3■■■■■ 5.64
PXMP2-205ENST00000543589 DNAJC5BQ9UF47 199 aa50.23■■■■■ 5.63
PXMP2-205ENST00000543589 BICRAQ9NZM4 1560 aa50.05■■■■■ 5.6
PXMP2-205ENST00000543589 SCRIBQ14160 1630 aa49.57■■■■■ 5.53
PXMP2-205ENST00000543589 SHROOM4Q9ULL8 1493 aa49.49■■■■■ 5.51
PXMP2-205ENST00000543589 EIF4G1Q04637 1599 aaKnown RBP48.8■■■■■ 5.4
PXMP2-205ENST00000543589 CC2D2AQ9P2K1 1620 aa48.78■■■■■ 5.4
PXMP2-205ENST00000543589 CECR2Q9BXF3 1484 aa48.59■■■■■ 5.37
PXMP2-205ENST00000543589 NCAPD3P42695 1498 aa47.4■■■■■ 5.18
PXMP2-205ENST00000543589 SMARCA4P51532 1647 aa47.35■■■■■ 5.17
PXMP2-205ENST00000543589 ATAD2BQ9ULI0 1458 aa47.3■■■■■ 5.16
PXMP2-205ENST00000543589 SMARCA2P51531 1590 aa47.2■■■■■ 5.15
PXMP2-205ENST00000543589 BAZ1AQ9NRL2 1556 aaPredicted RBP47.2■■■■■ 5.15
PXMP2-205ENST00000543589 HMGXB3Q12766 1538 aa47.09■■■■■ 5.13
PXMP2-205ENST00000543589 PEG3Q9GZU2 1588 aa46.92■■■■■ 5.1
PXMP2-205ENST00000543589 BAZ1BQ9UIG0 1483 aaKnown RBP46.87■■■■■ 5.09
PXMP2-205ENST00000543589 MROH2BQ7Z745 1585 aa46.86■■■■■ 5.09
PXMP2-205ENST00000543589 ERCC6Q03468 1493 aa46.58■■■■■ 5.05
PXMP2-205ENST00000543589 NESP48681 1621 aa46.47■■■■■ 5.03
PXMP2-205ENST00000543589 CUX2O14529 1486 aa46.38■■■■■ 5.01
PXMP2-205ENST00000543589 WIZO95785 1651 aa46.3■■■■■ 5
PXMP2-205ENST00000543589 LAMC3Q9Y6N6 1575 aa46.25■■■■■ 4.99
PXMP2-205ENST00000543589 RSF1Q96T23 1441 aaPredicted RBP46.06■■■■■ 4.96
PXMP2-205ENST00000543589 PDS5BQ9NTI5 1447 aa45.98■■■■■ 4.95
PXMP2-205ENST00000543589 CADPSQ9ULU8 1353 aa45.96■■■■■ 4.95
PXMP2-205ENST00000543589 THOC2Q8NI27 1593 aaKnown RBP45.94■■■■■ 4.94
PXMP2-205ENST00000543589 KIF21AQ7Z4S6 1674 aa45.88■■■■■ 4.94
PXMP2-205ENST00000543589 DNAJC5Q9H3Z4 198 aa45.85■■■■■ 4.93
PXMP2-205ENST00000543589 TOP2AP11388 1531 aaKnown RBP45.78■■■■■ 4.92
PXMP2-205ENST00000543589 MRC2Q9UBG0 1479 aa45.55■■■■■ 4.88
PXMP2-205ENST00000543589 CFTRP13569 1480 aa45.55■■■■■ 4.88
PXMP2-205ENST00000543589 CEP164Q9UPV0 1460 aa45.46■■■■■ 4.87
PXMP2-205ENST00000543589 FANCD2Q9BXW9 1451 aa45.44■■■■■ 4.87
PXMP2-205ENST00000543589 WDR62O43379 1518 aa45.43■■■■■ 4.86
PXMP2-205ENST00000543589 CCDC88BA6NC98 1476 aa45.25■■■■■ 4.83
PXMP2-205ENST00000543589 PRDM2Q13029 1718 aa45.09■■■■■ 4.81
PXMP2-205ENST00000543589 URB2Q14146 1524 aaKnown RBP45.04■■■■■ 4.8
PXMP2-205ENST00000543589 TOPBP1Q92547 1522 aa44.63■■■■■ 4.73
PXMP2-205ENST00000543589 ABCC8Q09428 1581 aa44.58■■■■■ 4.73
PXMP2-205ENST00000543589 IFT140Q96RY7 1462 aa44.54■■■■■ 4.72
PXMP2-205ENST00000543589 DNMBPQ6XZF7 1577 aa44.51■■■■■ 4.72
PXMP2-205ENST00000543589 ZNF608Q9ULD9 1512 aaPredicted RBP44.4■■■■■ 4.7
PXMP2-205ENST00000543589 SUPT5HO00267 1087 aaKnown RBP44.3■■■■■ 4.68
PXMP2-205ENST00000543589 OSCARQ8IYS5 282 aa44.3■■■■■ 4.68
PXMP2-205ENST00000543589 POLA1P09884 1462 aaPredicted RBP44.21■■■■■ 4.67
PXMP2-205ENST00000543589 TARBP1Q13395 1621 aaKnown RBP44.2■■■■■ 4.67
PXMP2-205ENST00000543589 EIF4G3O43432 1585 aaKnown RBP44.19■■■■■ 4.66
PXMP2-205ENST00000543589 AQRO60306 1485 aaKnown RBP eCLIP44.05■■■■■ 4.64
PXMP2-205ENST00000543589 CUX1P39880 1505 aa44.01■■■■■ 4.64
PXMP2-205ENST00000543589 RAD54L2Q9Y4B4 1467 aa44.01■■■■■ 4.64
PXMP2-205ENST00000543589 SOGA1O94964 1423 aa44■■■■■ 4.63
PXMP2-205ENST00000543589 FGD5Q6ZNL6 1462 aa43.98■■■■■ 4.63
PXMP2-205ENST00000543589 TRIM41Q8WV44 630 aa43.98■■■■■ 4.63
PXMP2-205ENST00000543589 TDRD9Q8NDG6 1382 aaKnown RBP43.85■■■■■ 4.61
PXMP2-205ENST00000543589 WDR97A6NE52 1622 aa43.81■■■■■ 4.6
PXMP2-205ENST00000543589 CHD1O14646 1710 aa43.75■■■■■ 4.59
PXMP2-205ENST00000543589 RIMBP3CA6NJZ7 1639 aa43.67■■■■■ 4.58
PXMP2-205ENST00000543589 RIMBP3BA6NNM3 1639 aa43.67■■■■■ 4.58
PXMP2-205ENST00000543589 RIMBP3Q9UFD9 1639 aa43.67■■■■■ 4.58
PXMP2-205ENST00000543589 FBLN2P98095 1184 aa43.67■■■■■ 4.58
PXMP2-205ENST00000543589 SNAPC4Q5SXM2 1469 aa43.63■■■■■ 4.57
PXMP2-205ENST00000543589 ARHGEF11O15085 1522 aa43.6■■■■■ 4.57
PXMP2-205ENST00000543589 GRIN2BQ13224 1484 aa43.59■■■■■ 4.57
PXMP2-205ENST00000543589 MAGI1Q96QZ7 1491 aaPredicted RBP43.56■■■■■ 4.56
PXMP2-205ENST00000543589 ABCA10Q8WWZ4 1543 aa43.53■■■■■ 4.56
PXMP2-205ENST00000543589 GAPVD1Q14C86 1478 aa43.48■■■■■ 4.55
PXMP2-205ENST00000543589 WRNQ14191 1432 aaPredicted RBP eCLIP43.45■■■■■ 4.55
PXMP2-205ENST00000543589 CHMP7Q8WUX9 453 aaPredicted RBP43.44■■■■■ 4.54
PXMP2-205ENST00000543589 TOP2BQ02880 1626 aa43.43■■■■■ 4.54
PXMP2-205ENST00000543589 ABCA5Q8WWZ7 1642 aa43.41■■■■■ 4.54
PXMP2-205ENST00000543589 BIVM-ERCC5R4GMW8 1640 aa43.41■■■■■ 4.54
PXMP2-205ENST00000543589 PBRM1Q86U86 1689 aa43.4■■■■■ 4.54
PXMP2-205ENST00000543589 SYNJ2O15056 1496 aa43.4■■■■■ 4.54
PXMP2-205ENST00000543589 SYNJ1O43426 1573 aa43.37■■■■■ 4.53
PXMP2-205ENST00000543589 CLASP1Q7Z460 1538 aa43.3■■■■■ 4.52
PXMP2-205ENST00000543589 CYB5RLQ6IPT4 315 aa43.23■■■■■ 4.51
PXMP2-205ENST00000543589 ARAP1Q96P48 1450 aa43.2■■■■■ 4.51
PXMP2-205ENST00000543589 ADAMTS12P58397 1594 aa43.05■■■■■ 4.48
PXMP2-205ENST00000543589 GRIN2AQ12879 1464 aa43.02■■■■■ 4.48
PXMP2-205ENST00000543589 ERICH3Q5RHP9 1530 aa42.99■■■■■ 4.47
PXMP2-205ENST00000543589 FHAD1B1AJZ9 1412 aa42.96■■■■■ 4.47
PXMP2-205ENST00000543589 NUP160Q12769 1436 aa42.87■■■■■ 4.45
PXMP2-205ENST00000543589 CEP170Q5SW79 1584 aa42.84■■■■■ 4.45
PXMP2-205ENST00000543589 ERCC6L2Q5T890 1561 aa42.63■■■■■ 4.41
PXMP2-205ENST00000543589 SHROOM2Q13796 1616 aa42.63■■■■■ 4.41
PXMP2-205ENST00000543589 TRHP20396 242 aaPredicted RBP42.6■■■■■ 4.41
PXMP2-205ENST00000543589 KIF27Q86VH2 1401 aa42.6■■■■■ 4.41
PXMP2-205ENST00000543589 IGF1RP08069 1367 aa42.52■■■■■ 4.4
PXMP2-205ENST00000543589 RUSC2Q8N2Y8 1516 aa42.45■■■■■ 4.39
PXMP2-205ENST00000543589 CUL7Q14999 1698 aa42.44■■■■■ 4.39
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms