RNA–Protein interactions for RNA: ENST00000409413.3

PRR35-201, Transcript of proline rich 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRR35, Length 2,216 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRR35-201ENST00000409413 NISCHQ9Y2I1 1504 aa49.32■■■■■ 5.49
PRR35-201ENST00000409413 CCDC180Q9P1Z9 1646 aa42.81■■■■■ 4.44
PRR35-201ENST00000409413 ZCCHC6Q5VYS8 1495 aaKnown RBP41.4■■■■■ 4.22
PRR35-201ENST00000409413 DCAF8L2P0C7V8 631 aa41.03■■■■■ 4.16
PRR35-201ENST00000409413 ABCC9O60706 1549 aa40.78■■■■■ 4.12
PRR35-201ENST00000409413 DCAF1Q9Y4B6 1507 aa40.62■■■■■ 4.09
PRR35-201ENST00000409413 SHROOM4Q9ULL8 1493 aa40.54■■■■■ 4.08
PRR35-201ENST00000409413 MYO15BQ96JP2 1530 aa40.1■■■■■ 4.01
PRR35-201ENST00000409413 NACADO15069 1562 aa39.93■■■■□ 3.98
PRR35-201ENST00000409413 SCRIBQ14160 1630 aa39.62■■■■□ 3.93
PRR35-201ENST00000409413 RB1CC1Q8TDY2 1594 aa39.6■■■■□ 3.93
PRR35-201ENST00000409413 SUPT5HO00267 1087 aaKnown RBP39.02■■■■□ 3.84
PRR35-201ENST00000409413 UNC13AQ9UPW8 1703 aa38.88■■■■□ 3.81
PRR35-201ENST00000409413 HRCP23327 699 aa38.83■■■■□ 3.81
PRR35-201ENST00000409413 PABPN1Q86U42 306 aaKnown RBP eCLIP38.58■■■■□ 3.77
PRR35-201ENST00000409413 BICRAQ9NZM4 1560 aa38.52■■■■□ 3.76
PRR35-201ENST00000409413 CECR2Q9BXF3 1484 aa38.47■■■■□ 3.75
PRR35-201ENST00000409413 RSF1Q96T23 1441 aaPredicted RBP38.35■■■■□ 3.73
PRR35-201ENST00000409413 MROH2BQ7Z745 1585 aa38.19■■■■□ 3.7
PRR35-201ENST00000409413 CHIC1Q5VXU3 224 aa38.17■■■■□ 3.7
PRR35-201ENST00000409413 BAZ1AQ9NRL2 1556 aaPredicted RBP38.02■■■■□ 3.68
PRR35-201ENST00000409413 PCGF6Q9BYE7 350 aa37.88■■■■□ 3.66
PRR35-201ENST00000409413 SMARCA4P51532 1647 aa37.88■■■■□ 3.65
PRR35-201ENST00000409413 WIZO95785 1651 aa37.87■■■■□ 3.65
PRR35-201ENST00000409413 PPARGC1BQ86YN6 1023 aaKnown RBP37.52■■■■□ 3.6
PRR35-201ENST00000409413 TOP2AP11388 1531 aaKnown RBP37.35■■■■□ 3.57
PRR35-201ENST00000409413 PEG3Q9GZU2 1588 aa37.34■■■■□ 3.57
PRR35-201ENST00000409413 EIF4G1Q04637 1599 aaKnown RBP37.33■■■■□ 3.57
PRR35-201ENST00000409413 ATAD2BQ9ULI0 1458 aa37.3■■■■□ 3.56
PRR35-201ENST00000409413 PELP1Q8IZL8 1130 aaKnown RBP37.24■■■■□ 3.55
PRR35-201ENST00000409413 SMARCA2P51531 1590 aa37.18■■■■□ 3.54
PRR35-201ENST00000409413 TRIM26Q12899 539 aaPredicted RBP37.16■■■■□ 3.54
PRR35-201ENST00000409413 CCDC88BA6NC98 1476 aa37.1■■■■□ 3.53
PRR35-201ENST00000409413 BAZ1BQ9UIG0 1483 aaKnown RBP37.08■■■■□ 3.53
PRR35-201ENST00000409413 ZEB1P37275 1124 aaPredicted RBP36.97■■■■□ 3.51
PRR35-201ENST00000409413 NCAPD3P42695 1498 aa36.93■■■■□ 3.5
PRR35-201ENST00000409413 LOC105371045A0A1W2PR82 267 aa36.88■■■■□ 3.49
PRR35-201ENST00000409413 CC2D2AQ9P2K1 1620 aa36.8■■■■□ 3.48
PRR35-201ENST00000409413 HMGXB3Q12766 1538 aa36.8■■■■□ 3.48
PRR35-201ENST00000409413 TRIM41Q8WV44 630 aa36.57■■■■□ 3.44
PRR35-201ENST00000409413 ABCC8Q09428 1581 aa36.38■■■■□ 3.41
PRR35-201ENST00000409413 SCAF1Q9H7N4 1312 aaKnown RBP36.3■■■■□ 3.4
PRR35-201ENST00000409413 DNAJC5BQ9UF47 199 aa36.19■■■■□ 3.38
PRR35-201ENST00000409413 CFTRP13569 1480 aa36.14■■■■□ 3.38
PRR35-201ENST00000409413 WRNQ14191 1432 aaPredicted RBP eCLIP36.06■■■■□ 3.36
PRR35-201ENST00000409413 FAM9AQ8IZU1 332 aaPredicted RBP36.06■■■■□ 3.36
PRR35-201ENST00000409413 CADPSQ9ULU8 1353 aa36.04■■■■□ 3.36
PRR35-201ENST00000409413 SYNJ1O43426 1573 aa35.93■■■■□ 3.34
PRR35-201ENST00000409413 MYT1Q01538 1121 aa35.84■■■■□ 3.33
PRR35-201ENST00000409413 NESP48681 1621 aa35.83■■■■□ 3.33
PRR35-201ENST00000409413 PRDM2Q13029 1718 aa35.79■■■■□ 3.32
PRR35-201ENST00000409413 SOGA1O94964 1423 aa35.74■■■■□ 3.31
PRR35-201ENST00000409413 ACIN1Q9UKV3 1341 aaKnown RBP35.73■■■■□ 3.31
PRR35-201ENST00000409413 TOP2BQ02880 1626 aa35.69■■■■□ 3.3
PRR35-201ENST00000409413 CUX1P39880 1505 aa35.67■■■■□ 3.3
PRR35-201ENST00000409413 EHMT2Q96KQ7 1210 aa35.67■■■■□ 3.3
PRR35-201ENST00000409413 FANCD2Q9BXW9 1451 aa35.64■■■■□ 3.3
PRR35-201ENST00000409413 RUSC2Q8N2Y8 1516 aa35.64■■■■□ 3.3
PRR35-201ENST00000409413 BIVM-ERCC5R4GMW8 1640 aa35.61■■■■□ 3.29
PRR35-201ENST00000409413 LAMC3Q9Y6N6 1575 aa35.6■■■■□ 3.29
PRR35-201ENST00000409413 NEUROD1Q13562 356 aa35.44■■■■□ 3.26
PRR35-201ENST00000409413 CENPBP07199 599 aaPredicted RBP35.43■■■■□ 3.26
PRR35-201ENST00000409413 CSRNP3Q8WYN3 585 aa35.42■■■■□ 3.26
PRR35-201ENST00000409413 EEA1Q15075 1411 aa35.41■■■■□ 3.26
PRR35-201ENST00000409413 PDS5BQ9NTI5 1447 aa35.39■■■■□ 3.26
PRR35-201ENST00000409413 CEP164Q9UPV0 1460 aa35.37■■■■□ 3.25
PRR35-201ENST00000409413 CCER1Q8TC90 406 aaPredicted RBP35.3■■■■□ 3.24
PRR35-201ENST00000409413 FGD5Q6ZNL6 1462 aa35.28■■■■□ 3.24
PRR35-201ENST00000409413 KIF21AQ7Z4S6 1674 aa35.27■■■■□ 3.24
PRR35-201ENST00000409413 TOPBP1Q92547 1522 aa35.25■■■■□ 3.23
PRR35-201ENST00000409413 DIEXFQ68CQ4 756 aaKnown RBP35.25■■■■□ 3.23
PRR35-201ENST00000409413 DNMBPQ6XZF7 1577 aa35.25■■■■□ 3.23
PRR35-201ENST00000409413 URB2Q14146 1524 aaKnown RBP35.22■■■■□ 3.23
PRR35-201ENST00000409413 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP35.22■■■■□ 3.23
PRR35-201ENST00000409413 GTF3C3Q9Y5Q9 886 aa35.21■■■■□ 3.23
PRR35-201ENST00000409413 KIF27Q86VH2 1401 aa35.11■■■■□ 3.21
PRR35-201ENST00000409413 POLA1P09884 1462 aaPredicted RBP35.1■■■■□ 3.21
PRR35-201ENST00000409413 RAD54L2Q9Y4B4 1467 aa35.08■■■■□ 3.21
PRR35-201ENST00000409413 CUX2O14529 1486 aa35.07■■■■□ 3.21
PRR35-201ENST00000409413 UBTFP17480 764 aaKnown RBP35.04■■■■□ 3.2
PRR35-201ENST00000409413 GOLGA3Q08378 1498 aa35.01■■■■□ 3.2
PRR35-201ENST00000409413 KIF21BO75037 1637 aa34.98■■■■□ 3.19
PRR35-201ENST00000409413 RAPGEF2Q9Y4G8 1499 aa34.96■■■■□ 3.19
PRR35-201ENST00000409413 TNIKQ9UKE5 1360 aa34.94■■■■□ 3.18
PRR35-201ENST00000409413 MRC2Q9UBG0 1479 aa34.93■■■■□ 3.18
PRR35-201ENST00000409413 ABCA10Q8WWZ4 1543 aa34.9■■■■□ 3.18
PRR35-201ENST00000409413 PRXQ9BXM0 1461 aa34.9■■■■□ 3.18
PRR35-201ENST00000409413 IGF1RP08069 1367 aa34.89■■■■□ 3.18
PRR35-201ENST00000409413 ERCC6Q03468 1493 aa34.88■■■■□ 3.17
PRR35-201ENST00000409413 CEP162Q5TB80 1403 aa34.81■■■■□ 3.16
PRR35-201ENST00000409413 ZNF316A6NFI3 1004 aaPredicted RBP34.78■■■■□ 3.16
PRR35-201ENST00000409413 TDRD9Q8NDG6 1382 aaKnown RBP34.77■■■■□ 3.16
PRR35-201ENST00000409413 ERICH3Q5RHP9 1530 aa34.73■■■■□ 3.15
PRR35-201ENST00000409413 WDR97A6NE52 1622 aa34.73■■■■□ 3.15
PRR35-201ENST00000409413 WDR62O43379 1518 aa34.72■■■■□ 3.15
PRR35-201ENST00000409413 TARBP1Q13395 1621 aaKnown RBP34.7■■■■□ 3.14
PRR35-201ENST00000409413 CARMIL1Q5VZK9 1371 aa34.69■■■■□ 3.14
PRR35-201ENST00000409413 THOC2Q8NI27 1593 aaKnown RBP34.63■■■■□ 3.13
PRR35-201ENST00000409413 RANGAP1P46060 587 aaPredicted RBP34.63■■■■□ 3.13
PRR35-201ENST00000409413 GAPVD1Q14C86 1478 aa34.59■■■■□ 3.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms