Protein–RNA interactions for Protein: Q9H0D6

XRN2, 5'-3' exoribonuclease 2, humanhuman

Known RBP eCLIP

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN2Q9H0D6 MSH6-214ENST00000616033 3429 ntTSL 5 BASIC12.35□□□□□ -0.434e-8■■□□□ 12.3
XRN2Q9H0D6 GPM6B-209ENST00000493085 558 ntTSL 312.29□□□□□ -0.444e-8■■□□□ 12.3
XRN2Q9H0D6 MSH6-213ENST00000614496 4150 ntTSL 1 (best) BASIC12.28□□□□□ -0.444e-8■■□□□ 12.3
XRN2Q9H0D6 MSH6-204ENST00000445503 4158 ntTSL 1 (best)11.6□□□□□ -0.554e-8■■□□□ 12.3
XRN2Q9H0D6 DBNL-204ENST00000432854 9618 ntTSL 511.6□□□□□ -0.554e-8■■□□□ 12.3
XRN2Q9H0D6 TECR-217ENST00000599101 584 ntTSL 211.56□□□□□ -0.564e-8■■□□□ 12.3
XRN2Q9H0D6 ITM2B-202ENST00000378565 10137 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.644e-8■■□□□ 12.3
XRN2Q9H0D6 MSH6-201ENST00000234420 7476 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.694e-8■■□□□ 12.3
XRN2Q9H0D6 KAT2A-204ENST00000588759 404 ntTSL 510.02□□□□□ -0.814e-8■■□□□ 12.3
XRN2Q9H0D6 MTHFD1L-208ENST00000450635 427 ntTSL 59.21□□□□□ -0.944e-8■■□□□ 12.3
XRN2Q9H0D6 GPM6B-210ENST00000493677 1372 ntTSL 2 BASIC8.73□□□□□ -1.014e-8■■□□□ 12.3
XRN2Q9H0D6 MSH6-211ENST00000606499 833 ntTSL 38.68□□□□□ -1.024e-8■■□□□ 12.3
XRN2Q9H0D6 GPM6B-201ENST00000316715 3275 ntAPPRIS ALT1 TSL 2 BASIC8.54□□□□□ -1.044e-8■■□□□ 12.3
XRN2Q9H0D6 GPM6B-205ENST00000454189 3957 ntTSL 1 (best) BASIC8.09□□□□□ -1.114e-8■■□□□ 12.3
XRN2Q9H0D6 MSH6-209ENST00000538136 4055 ntTSL 2 BASIC8.03□□□□□ -1.124e-8■■□□□ 12.3
XRN2Q9H0D6 TCF7L2-203ENST00000349937 725 ntTSL 47.18□□□□□ -1.264e-8■■□□□ 12.3
XRN2Q9H0D6 CSNK1E-214ENST00000498529 381 ntTSL 37.06□□□□□ -1.284e-8■■□□□ 12.3
XRN2Q9H0D6 MTHFD1L-209ENST00000453602 503 ntTSL 55.07□□□□□ -1.64e-8■■□□□ 12.3
XRN2Q9H0D6 TCF7L2-228ENST00000637321 430 ntTSL 53.36□□□□□ -1.874e-8■■□□□ 12.3
XRN2Q9H0D6 TCF7L2-229ENST00000637416 576 ntTSL 43.06□□□□□ -1.924e-8■■□□□ 12.3
XRN2Q9H0D6 NEU4-207ENST00000420288 845 ntTSL 322.98■■□□□ 1.273e-6■■□□□ 12.2
XRN2Q9H0D6 NEU4-209ENST00000426032 676 ntTSL 320.4■□□□□ 0.863e-6■■□□□ 12.2
XRN2Q9H0D6 MCRIP2-210ENST00000620462 1594 ntTSL 521.37■■□□□ 1.012e-6■■□□□ 12.2
XRN2Q9H0D6 MCRIP2-206ENST00000615744 1379 ntTSL 321.14■□□□□ 0.982e-6■■□□□ 12.2
XRN2Q9H0D6 P4HB-206ENST00000471535 579 ntTSL 427.27■■□□□ 1.963e-6■■□□□ 12.2
XRN2Q9H0D6 ZNF217-203ENST00000431687 779 ntTSL 58.85□□□□□ -0.996e-18■■□□□ 12.2
XRN2Q9H0D6 ZNF217-205ENST00000540425 568 ntTSL 38.7□□□□□ -1.026e-18■■□□□ 12.2
XRN2Q9H0D6 ASPSCR1-203ENST00000344865 1041 ntTSL 227.42■■□□□ 1.982e-8■■□□□ 12.2
XRN2Q9H0D6 ASPSCR1-209ENST00000581484 1001 ntTSL 220.54■□□□□ 0.882e-8■■□□□ 12.2
XRN2Q9H0D6 ZNF276-209ENST00000568295 2206 ntTSL 226.15■■□□□ 1.787e-13■■□□□ 12.2
XRN2Q9H0D6 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.567e-13■■□□□ 12.2
XRN2Q9H0D6 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.145e-8■■□□□ 12.2
XRN2Q9H0D6 CTTN-205ENST00000415461 1021 ntTSL 324.02■■□□□ 1.444e-11■■□□□ 12.2
XRN2Q9H0D6 CTTN-209ENST00000525276 584 ntTSL 313.77□□□□□ -0.214e-11■■□□□ 12.2
XRN2Q9H0D6 ECHDC2-225ENST00000544365 1335 ntTSL 523.8■■□□□ 1.41e-6■■□□□ 12.2
XRN2Q9H0D6 ECHDC2-219ENST00000495920 456 ntTSL 323.03■■□□□ 1.281e-6■■□□□ 12.2
XRN2Q9H0D6 ECHDC2-211ENST00000480312 804 ntTSL 520.07■□□□□ 0.81e-6■■□□□ 12.2
XRN2Q9H0D6 ECHDC2-226ENST00000544531 548 ntTSL 419.14■□□□□ 0.651e-6■■□□□ 12.2
XRN2Q9H0D6 ECHDC2-216ENST00000488268 631 ntTSL 313.1□□□□□ -0.311e-6■■□□□ 12.2
XRN2Q9H0D6 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC21.98■■□□□ 1.116e-7■■□□□ 12.2
XRN2Q9H0D6 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC21.76■■□□□ 1.076e-7■■□□□ 12.2
XRN2Q9H0D6 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC20.6■□□□□ 0.896e-7■■□□□ 12.2
XRN2Q9H0D6 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.776e-7■■□□□ 12.2
XRN2Q9H0D6 C22orf39-202ENST00000399562 3350 ntTSL 1 (best) BASIC11.75□□□□□ -0.536e-7■■□□□ 12.2
XRN2Q9H0D6 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.111e-7■■□□□ 12.2
XRN2Q9H0D6 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC15.15■□□□□ 0.021e-7■■□□□ 12.2
XRN2Q9H0D6 NDRG1-222ENST00000522476 1385 ntTSL 1 (best) BASIC13.66□□□□□ -0.221e-7■■□□□ 12.2
XRN2Q9H0D6 NDRG1-207ENST00000518066 560 ntTSL 5 BASIC13.54□□□□□ -0.241e-7■■□□□ 12.2
XRN2Q9H0D6 NDRG1-204ENST00000517599 2918 ntTSL 212.13□□□□□ -0.471e-7■■□□□ 12.2
XRN2Q9H0D6 NDRG1-201ENST00000323851 3014 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.621e-7■■□□□ 12.2
XRN2Q9H0D6 NDRG1-229ENST00000537882 2975 ntTSL 2 BASIC10.52□□□□□ -0.731e-7■■□□□ 12.2
XRN2Q9H0D6 PROC-208ENST00000442644 600 ntTSL 323.65■■□□□ 1.383e-8■■□□□ 12.2
XRN2Q9H0D6 EPS8L2-215ENST00000530093 414 ntTSL 427.55■■■□□ 27e-8■■□□□ 12.2
XRN2Q9H0D6 EPS8L2-210ENST00000527807 814 ntTSL 526.71■■□□□ 1.877e-8■■□□□ 12.2
XRN2Q9H0D6 EPS8L2-229ENST00000534755 474 ntTSL 425.47■■□□□ 1.677e-8■■□□□ 12.2
XRN2Q9H0D6 EPS8L2-224ENST00000533500 587 ntTSL 325.34■■□□□ 1.657e-8■■□□□ 12.2
XRN2Q9H0D6 EPS8L2-203ENST00000524763 580 ntTSL 322.64■■□□□ 1.217e-8■■□□□ 12.2
XRN2Q9H0D6 ARRB2-214ENST00000574502 709 ntTSL 327.72■■■□□ 2.033e-6■■□□□ 12.2
XRN2Q9H0D6 ARRB2-206ENST00000570739 553 ntTSL 423.65■■□□□ 1.383e-6■■□□□ 12.2
XRN2Q9H0D6 ARRB2-213ENST00000573886 665 ntTSL 217.72■□□□□ 0.433e-6■■□□□ 12.2
XRN2Q9H0D6 ARRB2-208ENST00000571428 864 ntTSL 312.67□□□□□ -0.383e-6■■□□□ 12.2
XRN2Q9H0D6 ACAP3-211ENST00000479108 485 ntTSL 318.7■□□□□ 0.584e-7■■□□□ 12.2
XRN2Q9H0D6 ACAP3-203ENST00000354980 582 ntTSL 516.01■□□□□ 0.154e-7■■□□□ 12.2
XRN2Q9H0D6 ACAP3-205ENST00000438966 265 ntTSL 39.43□□□□□ -0.94e-7■■□□□ 12.2
XRN2Q9H0D6 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC23.88■■□□□ 1.414e-6■■□□□ 12.2
XRN2Q9H0D6 HSPD1-207ENST00000439605 578 ntTSL 420.7■□□□□ 0.99e-15■■□□□ 12.2
XRN2Q9H0D6 HSPD1-203ENST00000418022 533 ntTSL 419.79■□□□□ 0.769e-15■■□□□ 12.2
XRN2Q9H0D6 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.759e-15■■□□□ 12.2
XRN2Q9H0D6 AC068675.1-201ENST00000588996 561 ntTSL 4 BASIC15.12■□□□□ 0.019e-15■■□□□ 12.2
XRN2Q9H0D6 HSPD1-205ENST00000428204 549 ntTSL 413.94□□□□□ -0.189e-15■■□□□ 12.2
XRN2Q9H0D6 HSPD1-201ENST00000345042 2299 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.249e-15■■□□□ 12.2
XRN2Q9H0D6 HSPD1-209ENST00000452200 888 ntTSL 511.62□□□□□ -0.559e-15■■□□□ 12.2
XRN2Q9H0D6 HSPD1-211ENST00000476746 853 ntTSL 211.38□□□□□ -0.599e-15■■□□□ 12.2
XRN2Q9H0D6 HSPD1-208ENST00000440114 619 ntTSL 510.03□□□□□ -0.89e-15■■□□□ 12.2
XRN2Q9H0D6 HSPD1-210ENST00000461097 714 ntTSL 29.75□□□□□ -0.859e-15■■□□□ 12.2
XRN2Q9H0D6 HSPD1-204ENST00000426480 529 ntTSL 46.79□□□□□ -1.329e-15■■□□□ 12.2
XRN2Q9H0D6 HSPD1-206ENST00000430176 754 ntTSL 55.45□□□□□ -1.549e-15■■□□□ 12.2
XRN2Q9H0D6 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.453e-7■■□□□ 12.2
XRN2Q9H0D6 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.43e-7■■□□□ 12.2
XRN2Q9H0D6 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.123e-7■■□□□ 12.2
XRN2Q9H0D6 TMC6-210ENST00000588792 843 ntTSL 221.19■□□□□ 0.981e-9■■□□□ 12.2
XRN2Q9H0D6 TMC6-205ENST00000586126 821 ntTSL 319.62■□□□□ 0.731e-9■■□□□ 12.2
XRN2Q9H0D6 TMC6-211ENST00000589271 1099 ntTSL 519.62■□□□□ 0.731e-9■■□□□ 12.2
XRN2Q9H0D6 TMC6-223ENST00000592594 551 ntTSL 419.05■□□□□ 0.641e-9■■□□□ 12.2
XRN2Q9H0D6 TMC6-207ENST00000586697 571 ntTSL 417.66■□□□□ 0.421e-9■■□□□ 12.2
XRN2Q9H0D6 TMC6-221ENST00000592063 743 ntTSL 517.11■□□□□ 0.331e-9■■□□□ 12.2
XRN2Q9H0D6 SLC22A23-206ENST00000467144 542 ntTSL 416.29■□□□□ 0.24e-6■■□□□ 12.2
XRN2Q9H0D6 LRP1-211ENST00000556356 5114 ntTSL 215.87■□□□□ 0.131e-6■■□□□ 12.1
XRN2Q9H0D6 EIF4G2-207ENST00000525995 592 ntTSL 425.52■■□□□ 1.683e-7■■□□□ 12.1
XRN2Q9H0D6 EIF4G2-203ENST00000524932 1286 ntTSL 524.97■■□□□ 1.593e-7■■□□□ 12.1
XRN2Q9H0D6 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.644e-9■■□□□ 12.1
XRN2Q9H0D6 EIF4G2-210ENST00000527419 571 ntTSL 518.91■□□□□ 0.623e-7■■□□□ 12.1
XRN2Q9H0D6 EIF4G2-228ENST00000534246 523 ntTSL 218.4■□□□□ 0.543e-7■■□□□ 12.1
XRN2Q9H0D6 EIF4G2-216ENST00000530702 563 ntTSL 216.9■□□□□ 0.33e-7■■□□□ 12.1
XRN2Q9H0D6 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.152e-9■■□□□ 12.1
XRN2Q9H0D6 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC14.14□□□□□ -0.152e-9■■□□□ 12.1
XRN2Q9H0D6 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.174e-9■■□□□ 12.1
XRN2Q9H0D6 GCLM-202ENST00000462183 583 ntTSL 313.7□□□□□ -0.222e-9■■□□□ 12.1
XRN2Q9H0D6 EIF4G2-221ENST00000532082 1069 ntTSL 1 (best)13.41□□□□□ -0.263e-7■■□□□ 12.1
XRN2Q9H0D6 EIF4G2-214ENST00000530211 591 ntTSL 212.8□□□□□ -0.363e-7■■□□□ 12.1
Retrieved 100 of 21,068 protein–RNA pairs in 105.4 ms