RNA–Protein interactions for RNA: ENST00000615724.1

GCLM-204, Transcript of glutamate-cysteine ligase modifier subunit, humanhuman

TSL 1 (best) BASIC

Gene GCLM, Length 3,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCLM-204ENST00000615724 NISCHQ9Y2I1 1504 aa28.75■■■□□ 2.19
GCLM-204ENST00000615724 SHROOM4Q9ULL8 1493 aa25.85■■□□□ 1.73
GCLM-204ENST00000615724 SUPT5HO00267 1087 aaKnown RBP25.59■■□□□ 1.69
GCLM-204ENST00000615724 DCAF8L2P0C7V8 631 aa24.86■■□□□ 1.57
GCLM-204ENST00000615724 PCGF6Q9BYE7 350 aa24.81■■□□□ 1.56
GCLM-204ENST00000615724 HRCP23327 699 aa24.78■■□□□ 1.56
GCLM-204ENST00000615724 MYO15BQ96JP2 1530 aa24.73■■□□□ 1.55
GCLM-204ENST00000615724 CHIC1Q5VXU3 224 aa24.72■■□□□ 1.55
GCLM-204ENST00000615724 PPARGC1BQ86YN6 1023 aaKnown RBP24.69■■□□□ 1.54
GCLM-204ENST00000615724 LOC105371045A0A1W2PR82 267 aa24.38■■□□□ 1.49
GCLM-204ENST00000615724 ZCCHC6Q5VYS8 1495 aaKnown RBP24.33■■□□□ 1.49
GCLM-204ENST00000615724 EHMT2Q96KQ7 1210 aa23.94■■□□□ 1.42
GCLM-204ENST00000615724 TRIM26Q12899 539 aaPredicted RBP23.8■■□□□ 1.4
GCLM-204ENST00000615724 FAM9AQ8IZU1 332 aaPredicted RBP23.79■■□□□ 1.4
GCLM-204ENST00000615724 DCAF1Q9Y4B6 1507 aa23.75■■□□□ 1.39
GCLM-204ENST00000615724 CCDC180Q9P1Z9 1646 aa23.71■■□□□ 1.39
GCLM-204ENST00000615724 TRIM41Q8WV44 630 aa23.51■■□□□ 1.35
GCLM-204ENST00000615724 SCAF1Q9H7N4 1312 aaKnown RBP23.34■■□□□ 1.33
GCLM-204ENST00000615724 ZEB1P37275 1124 aaPredicted RBP23.28■■□□□ 1.32
GCLM-204ENST00000615724 TTBK1Q5TCY1 1321 aaPredicted RBP23.21■■□□□ 1.31
GCLM-204ENST00000615724 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.17■■□□□ 1.3
GCLM-204ENST00000615724 RSF1Q96T23 1441 aaPredicted RBP23.15■■□□□ 1.3
GCLM-204ENST00000615724 SCRIBQ14160 1630 aa23.05■■□□□ 1.28
GCLM-204ENST00000615724 CCER1Q8TC90 406 aaPredicted RBP23.01■■□□□ 1.27
GCLM-204ENST00000615724 ABCC9O60706 1549 aa23.01■■□□□ 1.27
GCLM-204ENST00000615724 RB1CC1Q8TDY2 1594 aa23■■□□□ 1.27
GCLM-204ENST00000615724 PELP1Q8IZL8 1130 aaKnown RBP22.94■■□□□ 1.26
GCLM-204ENST00000615724 NEUROD1Q13562 356 aa22.91■■□□□ 1.26
GCLM-204ENST00000615724 ACIN1Q9UKV3 1341 aaKnown RBP22.79■■□□□ 1.24
GCLM-204ENST00000615724 CECR2Q9BXF3 1484 aa22.77■■□□□ 1.24
GCLM-204ENST00000615724 GTF3C3Q9Y5Q9 886 aa22.76■■□□□ 1.23
GCLM-204ENST00000615724 DIEXFQ68CQ4 756 aaKnown RBP22.74■■□□□ 1.23
GCLM-204ENST00000615724 YTHDC1Q96MU7 727 aaKnown RBP22.66■■□□□ 1.22
GCLM-204ENST00000615724 MROH2BQ7Z745 1585 aa22.59■■□□□ 1.21
GCLM-204ENST00000615724 CENPBP07199 599 aaPredicted RBP22.54■■□□□ 1.2
GCLM-204ENST00000615724 WIZO95785 1651 aa22.46■■□□□ 1.19
GCLM-204ENST00000615724 UBTFP17480 764 aaKnown RBP22.46■■□□□ 1.19
GCLM-204ENST00000615724 HNRNPUL2Q1KMD3 747 aaKnown RBP22.39■■□□□ 1.17
GCLM-204ENST00000615724 RANGAP1P46060 587 aaPredicted RBP22.36■■□□□ 1.17
GCLM-204ENST00000615724 ABCC8Q09428 1581 aa22.35■■□□□ 1.17
GCLM-204ENST00000615724 CCDC88BA6NC98 1476 aa22.33■■□□□ 1.17
GCLM-204ENST00000615724 ZNF316A6NFI3 1004 aaPredicted RBP22.31■■□□□ 1.16
GCLM-204ENST00000615724 SOGA1O94964 1423 aa22.3■■□□□ 1.16
GCLM-204ENST00000615724 CEP162Q5TB80 1403 aa22.3■■□□□ 1.16
GCLM-204ENST00000615724 MIER1Q8N108 512 aa22.27■■□□□ 1.16
GCLM-204ENST00000615724 RUSC2Q8N2Y8 1516 aa22.2■■□□□ 1.14
GCLM-204ENST00000615724 CSRNP3Q8WYN3 585 aa22.19■■□□□ 1.14
GCLM-204ENST00000615724 WRNQ14191 1432 aaPredicted RBP eCLIP22.07■■□□□ 1.12
GCLM-204ENST00000615724 TNIKQ9UKE5 1360 aa22.05■■□□□ 1.12
GCLM-204ENST00000615724 BAZ1AQ9NRL2 1556 aaPredicted RBP22.05■■□□□ 1.12
GCLM-204ENST00000615724 NACADO15069 1562 aa22.03■■□□□ 1.12
GCLM-204ENST00000615724 EIF4G1Q04637 1599 aaKnown RBP21.99■■□□□ 1.11
GCLM-204ENST00000615724 PABPN1Q86U42 306 aaKnown RBP eCLIP21.98■■□□□ 1.11
GCLM-204ENST00000615724 APLP2Q06481 763 aa21.94■■□□□ 1.1
GCLM-204ENST00000615724 TOP2AP11388 1531 aaKnown RBP21.85■■□□□ 1.09
GCLM-204ENST00000615724 SMARCA2P51531 1590 aa21.85■■□□□ 1.09
GCLM-204ENST00000615724 GOLGA3Q08378 1498 aa21.83■■□□□ 1.09
GCLM-204ENST00000615724 CLIP1P30622 1438 aa21.79■■□□□ 1.08
GCLM-204ENST00000615724 MYT1Q01538 1121 aa21.76■■□□□ 1.07
GCLM-204ENST00000615724 ITGAEP38570 1179 aa21.75■■□□□ 1.07
GCLM-204ENST00000615724 SMARCA4P51532 1647 aa21.74■■□□□ 1.07
GCLM-204ENST00000615724 EEA1Q15075 1411 aa21.71■■□□□ 1.07
GCLM-204ENST00000615724 SUPT16HQ9Y5B9 1047 aaKnown RBP21.65■■□□□ 1.06
GCLM-204ENST00000615724 RAPGEF2Q9Y4G8 1499 aa21.63■■□□□ 1.05
GCLM-204ENST00000615724 KCNH8Q96L42 1107 aa21.63■■□□□ 1.05
GCLM-204ENST00000615724 KANK4Q5T7N3 995 aaPredicted RBP21.62■■□□□ 1.05
GCLM-204ENST00000615724 CEP164Q9UPV0 1460 aa21.62■■□□□ 1.05
GCLM-204ENST00000615724 VPS8Q8N3P4 1428 aa21.62■■□□□ 1.05
GCLM-204ENST00000615724 BCANQ96GW7 911 aa21.61■■□□□ 1.05
GCLM-204ENST00000615724 SYNJ1O43426 1573 aa21.55■■□□□ 1.04
GCLM-204ENST00000615724 DHX57Q6P158 1386 aaKnown RBP21.53■■□□□ 1.04
GCLM-204ENST00000615724 KIF21BO75037 1637 aa21.44■■□□□ 1.02
GCLM-204ENST00000615724 TSHZ2Q9NRE2 1034 aa21.44■■□□□ 1.02
GCLM-204ENST00000615724 HIRIP3Q9BW71 556 aaPredicted RBP21.42■■□□□ 1.02
GCLM-204ENST00000615724 DDX10Q13206 875 aaKnown RBP21.35■■□□□ 1.01
GCLM-204ENST00000615724 UNC13AQ9UPW8 1703 aa21.32■■□□□ 1
GCLM-204ENST00000615724 FKBP8Q14318 412 aa21.31■■□□□ 1
GCLM-204ENST00000615724 SIN3AQ96ST3 1273 aa21.3■■□□□ 1
GCLM-204ENST00000615724 ATP1B4Q9UN42 357 aaPredicted RBP21.29■■□□□ 1
GCLM-204ENST00000615724 BAZ1BQ9UIG0 1483 aaKnown RBP21.26■□□□□ 0.99
GCLM-204ENST00000615724 CLSPNQ9HAW4 1339 aa21.26■□□□□ 0.99
GCLM-204ENST00000615724 TRIM52Q96A61 297 aa21.26■□□□□ 0.99
GCLM-204ENST00000615724 ARAP1Q96P48 1450 aa21.25■□□□□ 0.99
GCLM-204ENST00000615724 FAM50AQ14320 339 aaKnown RBP21.22■□□□□ 0.99
GCLM-204ENST00000615724 ATAD2BQ9ULI0 1458 aa21.22■□□□□ 0.99
GCLM-204ENST00000615724 P3H3Q8IVL6 736 aa21.21■□□□□ 0.99
GCLM-204ENST00000615724 CCNB3Q8WWL7 1395 aa21.2■□□□□ 0.98
GCLM-204ENST00000615724 ANP32EQ9BTT0 268 aa21.18■□□□□ 0.98
GCLM-204ENST00000615724 RAB3GAP2Q9H2M9 1393 aa21.17■□□□□ 0.98
GCLM-204ENST00000615724 BICRAQ9NZM4 1560 aa21.16■□□□□ 0.98
GCLM-204ENST00000615724 PRXQ9BXM0 1461 aa21.09■□□□□ 0.97
GCLM-204ENST00000615724 RRBP1Q9P2E9 1410 aaKnown RBP21.09■□□□□ 0.97
GCLM-204ENST00000615724 NEFLP07196 543 aa21.04■□□□□ 0.96
GCLM-204ENST00000615724 IRX6P78412 446 aaPredicted RBP21.04■□□□□ 0.96
GCLM-204ENST00000615724 TOP2BQ02880 1626 aa21.02■□□□□ 0.96
GCLM-204ENST00000615724 ARHGAP35Q9NRY4 1499 aa21.01■□□□□ 0.95
GCLM-204ENST00000615724 RBM19Q9Y4C8 960 aaKnown RBP21■□□□□ 0.95
GCLM-204ENST00000615724 PEG3Q9GZU2 1588 aa21■□□□□ 0.95
GCLM-204ENST00000615724 KIF27Q86VH2 1401 aa20.99■□□□□ 0.95
GCLM-204ENST00000615724 MAPKBP1O60336 1514 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms