RNA–Protein interactions for RNA: ENST00000393648.6

FGFR4-203, Transcript of fibroblast growth factor receptor 4, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene FGFR4, Length 2,733 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR4-203ENST00000393648 NISCHQ9Y2I1 1504 aa37.84■■■■□ 3.65
FGFR4-203ENST00000393648 CCDC180Q9P1Z9 1646 aa32.5■■■□□ 2.79
FGFR4-203ENST00000393648 ZCCHC6Q5VYS8 1495 aaKnown RBP31.83■■■□□ 2.69
FGFR4-203ENST00000393648 DCAF8L2P0C7V8 631 aa31.74■■■□□ 2.67
FGFR4-203ENST00000393648 SHROOM4Q9ULL8 1493 aa31.7■■■□□ 2.67
FGFR4-203ENST00000393648 DCAF1Q9Y4B6 1507 aa31.02■■■□□ 2.56
FGFR4-203ENST00000393648 ABCC9O60706 1549 aa30.94■■■□□ 2.54
FGFR4-203ENST00000393648 SUPT5HO00267 1087 aaKnown RBP30.71■■■□□ 2.51
FGFR4-203ENST00000393648 MYO15BQ96JP2 1530 aa30.45■■■□□ 2.46
FGFR4-203ENST00000393648 SCRIBQ14160 1630 aa30.38■■■□□ 2.45
FGFR4-203ENST00000393648 NACADO15069 1562 aa30.3■■■□□ 2.44
FGFR4-203ENST00000393648 RB1CC1Q8TDY2 1594 aa29.99■■■□□ 2.39
FGFR4-203ENST00000393648 RSF1Q96T23 1441 aaPredicted RBP29.64■■■□□ 2.34
FGFR4-203ENST00000393648 CECR2Q9BXF3 1484 aa29.61■■■□□ 2.33
FGFR4-203ENST00000393648 UNC13AQ9UPW8 1703 aa29.46■■■□□ 2.31
FGFR4-203ENST00000393648 PABPN1Q86U42 306 aaKnown RBP eCLIP29.46■■■□□ 2.315e-7■□□□□ 10.2
FGFR4-203ENST00000393648 CHIC1Q5VXU3 224 aa29.42■■■□□ 2.3
FGFR4-203ENST00000393648 MROH2BQ7Z745 1585 aa29.39■■■□□ 2.3
FGFR4-203ENST00000393648 BICRAQ9NZM4 1560 aa29.2■■■□□ 2.27
FGFR4-203ENST00000393648 WIZO95785 1651 aa29.16■■■□□ 2.26
FGFR4-203ENST00000393648 BAZ1AQ9NRL2 1556 aaPredicted RBP29.12■■■□□ 2.25
FGFR4-203ENST00000393648 SMARCA4P51532 1647 aa28.97■■■□□ 2.23
FGFR4-203ENST00000393648 TOP2AP11388 1531 aaKnown RBP28.68■■■□□ 2.18
FGFR4-203ENST00000393648 TRIM41Q8WV44 630 aa28.66■■■□□ 2.18
FGFR4-203ENST00000393648 HRCP23327 699 aa28.64■■■□□ 2.18
FGFR4-203ENST00000393648 CCDC88BA6NC98 1476 aa28.58■■■□□ 2.17
FGFR4-203ENST00000393648 LOC105371045A0A1W2PR82 267 aa28.55■■■□□ 2.16
FGFR4-203ENST00000393648 SMARCA2P51531 1590 aa28.5■■■□□ 2.15
FGFR4-203ENST00000393648 ATAD2BQ9ULI0 1458 aa28.48■■■□□ 2.15
FGFR4-203ENST00000393648 PEG3Q9GZU2 1588 aa28.45■■■□□ 2.14
FGFR4-203ENST00000393648 FAM9AQ8IZU1 332 aaPredicted RBP28.42■■■□□ 2.14
FGFR4-203ENST00000393648 BAZ1BQ9UIG0 1483 aaKnown RBP28.35■■■□□ 2.13
FGFR4-203ENST00000393648 EIF4G1Q04637 1599 aaKnown RBP28.34■■■□□ 2.13
FGFR4-203ENST00000393648 PPARGC1BQ86YN6 1023 aaKnown RBP28.25■■■□□ 2.11
FGFR4-203ENST00000393648 ABCC8Q09428 1581 aa28.23■■■□□ 2.11
FGFR4-203ENST00000393648 EHMT2Q96KQ7 1210 aa28.22■■■□□ 2.11
FGFR4-203ENST00000393648 PCGF6Q9BYE7 350 aa28.1■■■□□ 2.09
FGFR4-203ENST00000393648 NCAPD3P42695 1498 aa28.07■■■□□ 2.08
FGFR4-203ENST00000393648 HMGXB3Q12766 1538 aa27.95■■■□□ 2.07
FGFR4-203ENST00000393648 WRNQ14191 1432 aaPredicted RBP eCLIP27.87■■■□□ 2.05
FGFR4-203ENST00000393648 PELP1Q8IZL8 1130 aaKnown RBP27.83■■■□□ 2.04
FGFR4-203ENST00000393648 SOGA1O94964 1423 aa27.82■■■□□ 2.04
FGFR4-203ENST00000393648 CC2D2AQ9P2K1 1620 aa27.82■■■□□ 2.04
FGFR4-203ENST00000393648 RUSC2Q8N2Y8 1516 aa27.73■■■□□ 2.03
FGFR4-203ENST00000393648 SYNJ1O43426 1573 aa27.73■■■□□ 2.03
FGFR4-203ENST00000393648 CFTRP13569 1480 aa27.61■■■□□ 2.01
FGFR4-203ENST00000393648 CSRNP3Q8WYN3 585 aa27.6■■■□□ 2.01
FGFR4-203ENST00000393648 CADPSQ9ULU8 1353 aa27.49■■□□□ 1.99
FGFR4-203ENST00000393648 DNAJC5BQ9UF47 199 aa27.48■■□□□ 1.99
FGFR4-203ENST00000393648 EEA1Q15075 1411 aa27.46■■□□□ 1.99
FGFR4-203ENST00000393648 TOP2BQ02880 1626 aa27.45■■□□□ 1.98
FGFR4-203ENST00000393648 UBTFP17480 764 aaKnown RBP27.44■■□□□ 1.98
FGFR4-203ENST00000393648 CUX1P39880 1505 aa27.41■■□□□ 1.98
FGFR4-203ENST00000393648 BIVM-ERCC5R4GMW8 1640 aa27.33■■□□□ 1.97
FGFR4-203ENST00000393648 SCAF1Q9H7N4 1312 aaKnown RBP27.31■■□□□ 1.96
FGFR4-203ENST00000393648 NESP48681 1621 aa27.31■■□□□ 1.96
FGFR4-203ENST00000393648 TRIM26Q12899 539 aaPredicted RBP27.27■■□□□ 1.96
FGFR4-203ENST00000393648 TNIKQ9UKE5 1360 aa27.27■■□□□ 1.96
FGFR4-203ENST00000393648 CEP162Q5TB80 1403 aa27.26■■□□□ 1.95
FGFR4-203ENST00000393648 GOLGA3Q08378 1498 aa27.26■■□□□ 1.95
FGFR4-203ENST00000393648 PRDM2Q13029 1718 aa27.21■■□□□ 1.95
FGFR4-203ENST00000393648 FANCD2Q9BXW9 1451 aa27.21■■□□□ 1.95
FGFR4-203ENST00000393648 CEP164Q9UPV0 1460 aa27.2■■□□□ 1.94
FGFR4-203ENST00000393648 RAPGEF2Q9Y4G8 1499 aa27.17■■□□□ 1.94
FGFR4-203ENST00000393648 RANGAP1P46060 587 aaPredicted RBP27.16■■□□□ 1.94
FGFR4-203ENST00000393648 KIF21BO75037 1637 aa27.1■■□□□ 1.93
FGFR4-203ENST00000393648 KIF27Q86VH2 1401 aa27.08■■□□□ 1.93
FGFR4-203ENST00000393648 TTBK1Q5TCY1 1321 aaPredicted RBP27.07■■□□□ 1.92
FGFR4-203ENST00000393648 FGD5Q6ZNL6 1462 aa27.06■■□□□ 1.92
FGFR4-203ENST00000393648 CUX2O14529 1486 aa27.02■■□□□ 1.92
FGFR4-203ENST00000393648 PRXQ9BXM0 1461 aa26.98■■□□□ 1.91
FGFR4-203ENST00000393648 LAMC3Q9Y6N6 1575 aa26.97■■□□□ 1.91
FGFR4-203ENST00000393648 CLIP1P30622 1438 aa26.95■■□□□ 1.9
FGFR4-203ENST00000393648 TOPBP1Q92547 1522 aa26.93■■□□□ 1.9
FGFR4-203ENST00000393648 RAD54L2Q9Y4B4 1467 aa26.92■■□□□ 1.9
FGFR4-203ENST00000393648 IGF1RP08069 1367 aa26.9■■□□□ 1.9
FGFR4-203ENST00000393648 DNMBPQ6XZF7 1577 aa26.89■■□□□ 1.89
FGFR4-203ENST00000393648 PDS5BQ9NTI5 1447 aa26.87■■□□□ 1.89
FGFR4-203ENST00000393648 POLA1P09884 1462 aaPredicted RBP26.87■■□□□ 1.89
FGFR4-203ENST00000393648 URB2Q14146 1524 aaKnown RBP26.86■■□□□ 1.89
FGFR4-203ENST00000393648 ERICH3Q5RHP9 1530 aa26.84■■□□□ 1.89
FGFR4-203ENST00000393648 CARMIL1Q5VZK9 1371 aa26.76■■□□□ 1.88
FGFR4-203ENST00000393648 KIF21AQ7Z4S6 1674 aa26.75■■□□□ 1.87
FGFR4-203ENST00000393648 ZEB1P37275 1124 aaPredicted RBP26.75■■□□□ 1.87
FGFR4-203ENST00000393648 MYT1Q01538 1121 aa26.74■■□□□ 1.87
FGFR4-203ENST00000393648 ABCA10Q8WWZ4 1543 aa26.71■■□□□ 1.87
FGFR4-203ENST00000393648 VPS8Q8N3P4 1428 aa26.69■■□□□ 1.86
FGFR4-203ENST00000393648 TDRD9Q8NDG6 1382 aaKnown RBP26.69■■□□□ 1.86
FGFR4-203ENST00000393648 APLP2Q06481 763 aa26.59■■□□□ 1.85
FGFR4-203ENST00000393648 ARAP1Q96P48 1450 aa26.58■■□□□ 1.85
FGFR4-203ENST00000393648 ARHGAP35Q9NRY4 1499 aa26.53■■□□□ 1.84
FGFR4-203ENST00000393648 ACIN1Q9UKV3 1341 aaKnown RBP26.51■■□□□ 1.83
FGFR4-203ENST00000393648 NEUROD1Q13562 356 aa26.5■■□□□ 1.83
FGFR4-203ENST00000393648 GAPVD1Q14C86 1478 aa26.49■■□□□ 1.83
FGFR4-203ENST00000393648 P3H3Q8IVL6 736 aa26.49■■□□□ 1.83
FGFR4-203ENST00000393648 MRC2Q9UBG0 1479 aa26.49■■□□□ 1.83
FGFR4-203ENST00000393648 WDR97A6NE52 1622 aa26.47■■□□□ 1.83
FGFR4-203ENST00000393648 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.43■■□□□ 1.82
FGFR4-203ENST00000393648 TARBP1Q13395 1621 aaKnown RBP26.41■■□□□ 1.82
FGFR4-203ENST00000393648 KANK4Q5T7N3 995 aaPredicted RBP26.41■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms