RNA–Protein interactions for RNA: ENST00000454189.6

GPM6B-205, Transcript of glycoprotein M6B, humanhuman

TSL 1 (best) BASIC

Gene GPM6B, Length 3,957 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPM6B-205ENST00000454189 NISCHQ9Y2I1 1504 aa15.44■□□□□ 0.06
GPM6B-205ENST00000454189 DCAF8L2P0C7V8 631 aa14.2□□□□□ -0.14
GPM6B-205ENST00000454189 SHROOM4Q9ULL8 1493 aa13.83□□□□□ -0.2
GPM6B-205ENST00000454189 SUPT5HO00267 1087 aaKnown RBP13.75□□□□□ -0.21
GPM6B-205ENST00000454189 CCDC180Q9P1Z9 1646 aa12.91□□□□□ -0.34
GPM6B-205ENST00000454189 ZCCHC6Q5VYS8 1495 aaKnown RBP12.91□□□□□ -0.34
GPM6B-205ENST00000454189 EHMT2Q96KQ7 1210 aa12.88□□□□□ -0.35
GPM6B-205ENST00000454189 FAM9AQ8IZU1 332 aaPredicted RBP12.82□□□□□ -0.36
GPM6B-205ENST00000454189 ABCC9O60706 1549 aa12.8□□□□□ -0.36
GPM6B-205ENST00000454189 CHIC1Q5VXU3 224 aa12.79□□□□□ -0.36
GPM6B-205ENST00000454189 TRIM41Q8WV44 630 aa12.78□□□□□ -0.36
GPM6B-205ENST00000454189 PCGF6Q9BYE7 350 aa12.69□□□□□ -0.38
GPM6B-205ENST00000454189 LOC105371045A0A1W2PR82 267 aa12.57□□□□□ -0.4
GPM6B-205ENST00000454189 SCRIBQ14160 1630 aa12.5□□□□□ -0.41
GPM6B-205ENST00000454189 PABPN1Q86U42 306 aaKnown RBP eCLIP12.46□□□□□ -0.42
GPM6B-205ENST00000454189 DCAF1Q9Y4B6 1507 aa12.43□□□□□ -0.42
GPM6B-205ENST00000454189 TTBK1Q5TCY1 1321 aaPredicted RBP12.42□□□□□ -0.42
GPM6B-205ENST00000454189 UBTFP17480 764 aaKnown RBP12.39□□□□□ -0.43
GPM6B-205ENST00000454189 APLP2Q06481 763 aa12.39□□□□□ -0.43
GPM6B-205ENST00000454189 RANGAP1P46060 587 aaPredicted RBP12.34□□□□□ -0.43
GPM6B-205ENST00000454189 TRIM26Q12899 539 aaPredicted RBP12.34□□□□□ -0.43
GPM6B-205ENST00000454189 PPARGC1BQ86YN6 1023 aaKnown RBP12.31□□□□□ -0.44
GPM6B-205ENST00000454189 NACADO15069 1562 aa12.27□□□□□ -0.44
GPM6B-205ENST00000454189 HRCP23327 699 aa12.27□□□□□ -0.45
GPM6B-205ENST00000454189 RSF1Q96T23 1441 aaPredicted RBP12.27□□□□□ -0.45
GPM6B-205ENST00000454189 ZEB1P37275 1124 aaPredicted RBP12.24□□□□□ -0.45
GPM6B-205ENST00000454189 RB1CC1Q8TDY2 1594 aa12.22□□□□□ -0.45
GPM6B-205ENST00000454189 CCER1Q8TC90 406 aaPredicted RBP12.2□□□□□ -0.46
GPM6B-205ENST00000454189 MYO15BQ96JP2 1530 aa12.18□□□□□ -0.46
GPM6B-205ENST00000454189 CECR2Q9BXF3 1484 aa12.11□□□□□ -0.47
GPM6B-205ENST00000454189 ATP1B4Q9UN42 357 aaPredicted RBP12.06□□□□□ -0.48
GPM6B-205ENST00000454189 CSRNP3Q8WYN3 585 aa12.03□□□□□ -0.48
GPM6B-205ENST00000454189 BAZ1AQ9NRL2 1556 aaPredicted RBP11.99□□□□□ -0.49
GPM6B-205ENST00000454189 MROH2BQ7Z745 1585 aa11.99□□□□□ -0.49
GPM6B-205ENST00000454189 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.95□□□□□ -0.5
GPM6B-205ENST00000454189 HNRNPUL2Q1KMD3 747 aaKnown RBP11.94□□□□□ -0.5
GPM6B-205ENST00000454189 ITGAEP38570 1179 aa11.86□□□□□ -0.51
GPM6B-205ENST00000454189 WIZO95785 1651 aa11.84□□□□□ -0.51
GPM6B-205ENST00000454189 BAZ1BQ9UIG0 1483 aaKnown RBP11.83□□□□□ -0.52
GPM6B-205ENST00000454189 WRNQ14191 1432 aaPredicted RBP eCLIP11.8□□□□□ -0.52
GPM6B-205ENST00000454189 CCDC88BA6NC98 1476 aa11.79□□□□□ -0.52
GPM6B-205ENST00000454189 CENPBP07199 599 aaPredicted RBP11.78□□□□□ -0.52
GPM6B-205ENST00000454189 EEA1Q15075 1411 aa11.76□□□□□ -0.53
GPM6B-205ENST00000454189 TOP2AP11388 1531 aaKnown RBP11.73□□□□□ -0.53
GPM6B-205ENST00000454189 CEP162Q5TB80 1403 aa11.71□□□□□ -0.53
GPM6B-205ENST00000454189 ABCC8Q09428 1581 aa11.71□□□□□ -0.53
GPM6B-205ENST00000454189 SMARCA4P51532 1647 aa11.71□□□□□ -0.54
GPM6B-205ENST00000454189 SOGA1O94964 1423 aa11.7□□□□□ -0.54
GPM6B-205ENST00000454189 GOLGA3Q08378 1498 aa11.68□□□□□ -0.54
GPM6B-205ENST00000454189 TNIKQ9UKE5 1360 aa11.68□□□□□ -0.54
GPM6B-205ENST00000454189 P3H3Q8IVL6 736 aa11.68□□□□□ -0.54
GPM6B-205ENST00000454189 YTHDC1Q96MU7 727 aaKnown RBP11.68□□□□□ -0.54
GPM6B-205ENST00000454189 CLIP1P30622 1438 aa11.67□□□□□ -0.54
GPM6B-205ENST00000454189 FAM50AQ14320 339 aaKnown RBP11.67□□□□□ -0.54
GPM6B-205ENST00000454189 DIEXFQ68CQ4 756 aaKnown RBP11.66□□□□□ -0.54
GPM6B-205ENST00000454189 SMARCA2P51531 1590 aa11.65□□□□□ -0.55
GPM6B-205ENST00000454189 ATAD2BQ9ULI0 1458 aa11.62□□□□□ -0.55
GPM6B-205ENST00000454189 CEP164Q9UPV0 1460 aa11.62□□□□□ -0.55
GPM6B-205ENST00000454189 KIF27Q86VH2 1401 aa11.57□□□□□ -0.56
GPM6B-205ENST00000454189 PELP1Q8IZL8 1130 aaKnown RBP11.57□□□□□ -0.56
GPM6B-205ENST00000454189 ZNF316A6NFI3 1004 aaPredicted RBP11.53□□□□□ -0.56
GPM6B-205ENST00000454189 FBLN2P98095 1184 aa11.52□□□□□ -0.57
GPM6B-205ENST00000454189 NEUROD1Q13562 356 aa11.5□□□□□ -0.57
GPM6B-205ENST00000454189 RUSC2Q8N2Y8 1516 aa11.5□□□□□ -0.57
GPM6B-205ENST00000454189 ARID3CA6NKF2 412 aa11.48□□□□□ -0.57
GPM6B-205ENST00000454189 CUX2O14529 1486 aa11.45□□□□□ -0.58
GPM6B-205ENST00000454189 TRIM52Q96A61 297 aa11.44□□□□□ -0.58
GPM6B-205ENST00000454189 VPS8Q8N3P4 1428 aa11.42□□□□□ -0.58
GPM6B-205ENST00000454189 CADPSQ9ULU8 1353 aa11.42□□□□□ -0.58
GPM6B-205ENST00000454189 CARMIL1Q5VZK9 1371 aa11.41□□□□□ -0.58
GPM6B-205ENST00000454189 BICRAQ9NZM4 1560 aa11.4□□□□□ -0.58
GPM6B-205ENST00000454189 RAPGEF2Q9Y4G8 1499 aa11.39□□□□□ -0.59
GPM6B-205ENST00000454189 NCAPD3P42695 1498 aa11.38□□□□□ -0.59
GPM6B-205ENST00000454189 MTUS2Q5JR59 1369 aa11.36□□□□□ -0.59
GPM6B-205ENST00000454189 EIF4G1Q04637 1599 aaKnown RBP11.36□□□□□ -0.59
GPM6B-205ENST00000454189 CDK11AQ9UQ88 783 aaPredicted RBP11.35□□□□□ -0.59
GPM6B-205ENST00000454189 NEFLP07196 543 aa11.34□□□□□ -0.59
GPM6B-205ENST00000454189 POLR3GLQ9BT43 218 aa11.34□□□□□ -0.59
GPM6B-205ENST00000454189 KANK4Q5T7N3 995 aaPredicted RBP11.33□□□□□ -0.6
GPM6B-205ENST00000454189 UNC13AQ9UPW8 1703 aa11.33□□□□□ -0.6
GPM6B-205ENST00000454189 MYT1LQ9UL68 1186 aa11.32□□□□□ -0.6
GPM6B-205ENST00000454189 GTF3C3Q9Y5Q9 886 aa11.3□□□□□ -0.6
GPM6B-205ENST00000454189 ACIN1Q9UKV3 1341 aaKnown RBP11.3□□□□□ -0.6
GPM6B-205ENST00000454189 CHMP7Q8WUX9 453 aaPredicted RBP11.3□□□□□ -0.6
GPM6B-205ENST00000454189 ZNF777Q9ULD5 760 aaPredicted RBP11.3□□□□□ -0.6
GPM6B-205ENST00000454189 SYNJ1O43426 1573 aa11.29□□□□□ -0.6
GPM6B-205ENST00000454189 CHIC2Q9UKJ5 165 aa11.29□□□□□ -0.6
GPM6B-205ENST00000454189 FHAD1B1AJZ9 1412 aa11.29□□□□□ -0.6
GPM6B-205ENST00000454189 CCNB3Q8WWL7 1395 aa11.28□□□□□ -0.6
GPM6B-205ENST00000454189 TDRD9Q8NDG6 1382 aaKnown RBP11.28□□□□□ -0.6
GPM6B-205ENST00000454189 PDS5BQ9NTI5 1447 aa11.28□□□□□ -0.6
GPM6B-205ENST00000454189 CNGB1Q14028 1251 aaPredicted RBP11.27□□□□□ -0.61
GPM6B-205ENST00000454189 FANCD2Q9BXW9 1451 aa11.26□□□□□ -0.61
GPM6B-205ENST00000454189 TONSLQ96HA7 1378 aa11.25□□□□□ -0.61
GPM6B-205ENST00000454189 CFTRP13569 1480 aa11.25□□□□□ -0.61
GPM6B-205ENST00000454189 ANP32CO43423 234 aa11.23□□□□□ -0.61
GPM6B-205ENST00000454189 HMGXB3Q12766 1538 aa11.23□□□□□ -0.61
GPM6B-205ENST00000454189 PEG3Q9GZU2 1588 aa11.23□□□□□ -0.61
GPM6B-205ENST00000454189 ZNF326Q5BKZ1 582 aaKnown RBP11.23□□□□□ -0.61
GPM6B-205ENST00000454189 CLSPNQ9HAW4 1339 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms