RNA–Protein interactions for RNA: ENST00000544531.5

ECHDC2-226, Transcript of enoyl-CoA hydratase domain containing 2, humanhuman

TSL 4

Gene ECHDC2, Length 548 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC2-226ENST00000544531 NISCHQ9Y2I1 1504 aa39.36■■■■□ 3.89
ECHDC2-226ENST00000544531 ABCC9O60706 1549 aa35.22■■■■□ 3.23
ECHDC2-226ENST00000544531 CCDC180Q9P1Z9 1646 aa35.21■■■■□ 3.23
ECHDC2-226ENST00000544531 RB1CC1Q8TDY2 1594 aa33.48■■■□□ 2.95
ECHDC2-226ENST00000544531 DCAF8L2P0C7V8 631 aa33.33■■■□□ 2.93
ECHDC2-226ENST00000544531 NACADO15069 1562 aa33.27■■■□□ 2.92
ECHDC2-226ENST00000544531 DNAJC5BQ9UF47 199 aa32.97■■■□□ 2.87
ECHDC2-226ENST00000544531 PABPN1Q86U42 306 aaKnown RBP eCLIP32.87■■■□□ 2.85
ECHDC2-226ENST00000544531 MYO15BQ96JP2 1530 aa32.8■■■□□ 2.84
ECHDC2-226ENST00000544531 UNC13AQ9UPW8 1703 aa32.79■■■□□ 2.84
ECHDC2-226ENST00000544531 ZCCHC6Q5VYS8 1495 aaKnown RBP32.63■■■□□ 2.81
ECHDC2-226ENST00000544531 BICRAQ9NZM4 1560 aa32.54■■■□□ 2.8
ECHDC2-226ENST00000544531 DCAF1Q9Y4B6 1507 aa32.45■■■□□ 2.78
ECHDC2-226ENST00000544531 SCRIBQ14160 1630 aa32.2■■■□□ 2.75
ECHDC2-226ENST00000544531 SHROOM4Q9ULL8 1493 aa31.98■■■□□ 2.71
ECHDC2-226ENST00000544531 CC2D2AQ9P2K1 1620 aa31.78■■■□□ 2.68
ECHDC2-226ENST00000544531 EIF4G1Q04637 1599 aaKnown RBP31.73■■■□□ 2.67
ECHDC2-226ENST00000544531 CECR2Q9BXF3 1484 aa31.67■■■□□ 2.66
ECHDC2-226ENST00000544531 NCAPD3P42695 1498 aa30.73■■■□□ 2.51
ECHDC2-226ENST00000544531 ATAD2BQ9ULI0 1458 aa30.69■■■□□ 2.5
ECHDC2-226ENST00000544531 SMARCA4P51532 1647 aa30.69■■■□□ 2.5
ECHDC2-226ENST00000544531 SMARCA2P51531 1590 aa30.57■■■□□ 2.48
ECHDC2-226ENST00000544531 BAZ1AQ9NRL2 1556 aaPredicted RBP30.53■■■□□ 2.48
ECHDC2-226ENST00000544531 HMGXB3Q12766 1538 aa30.48■■■□□ 2.47
ECHDC2-226ENST00000544531 BAZ1BQ9UIG0 1483 aaKnown RBP30.39■■■□□ 2.46
ECHDC2-226ENST00000544531 MROH2BQ7Z745 1585 aa30.38■■■□□ 2.45
ECHDC2-226ENST00000544531 ERCC6Q03468 1493 aa30.37■■■□□ 2.45
ECHDC2-226ENST00000544531 PEG3Q9GZU2 1588 aa30.32■■■□□ 2.45
ECHDC2-226ENST00000544531 NESP48681 1621 aa30.3■■■□□ 2.44
ECHDC2-226ENST00000544531 CUX2O14529 1486 aa30.19■■■□□ 2.42
ECHDC2-226ENST00000544531 DNAJC5Q9H3Z4 198 aa30.11■■■□□ 2.41
ECHDC2-226ENST00000544531 WIZO95785 1651 aa30.04■■■□□ 2.4
ECHDC2-226ENST00000544531 LAMC3Q9Y6N6 1575 aa30.01■■■□□ 2.39
ECHDC2-226ENST00000544531 THOC2Q8NI27 1593 aaKnown RBP29.9■■■□□ 2.38
ECHDC2-226ENST00000544531 KIF21AQ7Z4S6 1674 aa29.88■■■□□ 2.37
ECHDC2-226ENST00000544531 PDS5BQ9NTI5 1447 aa29.85■■■□□ 2.37
ECHDC2-226ENST00000544531 CADPSQ9ULU8 1353 aa29.83■■■□□ 2.37
ECHDC2-226ENST00000544531 RSF1Q96T23 1441 aaPredicted RBP29.79■■■□□ 2.36
ECHDC2-226ENST00000544531 MRC2Q9UBG0 1479 aa29.6■■■□□ 2.33
ECHDC2-226ENST00000544531 TOP2AP11388 1531 aaKnown RBP29.6■■■□□ 2.33
ECHDC2-226ENST00000544531 CEP164Q9UPV0 1460 aa29.51■■■□□ 2.31
ECHDC2-226ENST00000544531 WDR62O43379 1518 aa29.5■■■□□ 2.31
ECHDC2-226ENST00000544531 CFTRP13569 1480 aa29.5■■■□□ 2.31
ECHDC2-226ENST00000544531 FANCD2Q9BXW9 1451 aa29.5■■■□□ 2.31
ECHDC2-226ENST00000544531 CCDC88BA6NC98 1476 aa29.31■■■□□ 2.28
ECHDC2-226ENST00000544531 URB2Q14146 1524 aaKnown RBP29.26■■■□□ 2.27
ECHDC2-226ENST00000544531 PRDM2Q13029 1718 aa29.2■■■□□ 2.26
ECHDC2-226ENST00000544531 TOPBP1Q92547 1522 aa28.96■■■□□ 2.23
ECHDC2-226ENST00000544531 TRIM41Q8WV44 630 aa28.93■■■□□ 2.22
ECHDC2-226ENST00000544531 ZNF608Q9ULD9 1512 aaPredicted RBP28.91■■■□□ 2.22
ECHDC2-226ENST00000544531 OSCARQ8IYS5 282 aa28.91■■■□□ 2.22
ECHDC2-226ENST00000544531 IFT140Q96RY7 1462 aa28.9■■■□□ 2.22
ECHDC2-226ENST00000544531 ABCC8Q09428 1581 aa28.84■■■□□ 2.21
ECHDC2-226ENST00000544531 DNMBPQ6XZF7 1577 aa28.84■■■□□ 2.21
ECHDC2-226ENST00000544531 EIF4G3O43432 1585 aaKnown RBP28.71■■■□□ 2.19
ECHDC2-226ENST00000544531 TARBP1Q13395 1621 aaKnown RBP28.69■■■□□ 2.18
ECHDC2-226ENST00000544531 AQRO60306 1485 aaKnown RBP eCLIP28.67■■■□□ 2.183e-6■■□□□ 13.8
ECHDC2-226ENST00000544531 POLA1P09884 1462 aaPredicted RBP28.67■■■□□ 2.18
ECHDC2-226ENST00000544531 SUPT5HO00267 1087 aaKnown RBP28.67■■■□□ 2.18
ECHDC2-226ENST00000544531 RAD54L2Q9Y4B4 1467 aa28.62■■■□□ 2.17
ECHDC2-226ENST00000544531 SOGA1O94964 1423 aa28.56■■■□□ 2.16
ECHDC2-226ENST00000544531 CUX1P39880 1505 aa28.53■■■□□ 2.16
ECHDC2-226ENST00000544531 FGD5Q6ZNL6 1462 aa28.53■■■□□ 2.16
ECHDC2-226ENST00000544531 TDRD9Q8NDG6 1382 aaKnown RBP28.52■■■□□ 2.16
ECHDC2-226ENST00000544531 RIMBP3CA6NJZ7 1639 aa28.51■■■□□ 2.15
ECHDC2-226ENST00000544531 RIMBP3BA6NNM3 1639 aa28.51■■■□□ 2.15
ECHDC2-226ENST00000544531 RIMBP3Q9UFD9 1639 aa28.51■■■□□ 2.15
ECHDC2-226ENST00000544531 CHD1O14646 1710 aa28.5■■■□□ 2.15
ECHDC2-226ENST00000544531 FBLN2P98095 1184 aa28.5■■■□□ 2.15
ECHDC2-226ENST00000544531 ARHGEF11O15085 1522 aa28.43■■■□□ 2.14
ECHDC2-226ENST00000544531 SNAPC4Q5SXM2 1469 aa28.35■■■□□ 2.13
ECHDC2-226ENST00000544531 WDR97A6NE52 1622 aa28.3■■■□□ 2.12
ECHDC2-226ENST00000544531 CYB5RLQ6IPT4 315 aa28.29■■■□□ 2.12
ECHDC2-226ENST00000544531 GRIN2BQ13224 1484 aa28.27■■■□□ 2.12
ECHDC2-226ENST00000544531 CHMP7Q8WUX9 453 aaPredicted RBP28.26■■■□□ 2.11
ECHDC2-226ENST00000544531 MAGI1Q96QZ7 1491 aaPredicted RBP28.23■■■□□ 2.11
ECHDC2-226ENST00000544531 GAPVD1Q14C86 1478 aa28.21■■■□□ 2.11
ECHDC2-226ENST00000544531 PBRM1Q86U86 1689 aa28.17■■■□□ 2.1
ECHDC2-226ENST00000544531 ARAP1Q96P48 1450 aa28.17■■■□□ 2.1
ECHDC2-226ENST00000544531 ABCA10Q8WWZ4 1543 aa28.17■■■□□ 2.1
ECHDC2-226ENST00000544531 SYNJ2O15056 1496 aa28.15■■■□□ 2.1
ECHDC2-226ENST00000544531 CLASP1Q7Z460 1538 aa28.13■■■□□ 2.09
ECHDC2-226ENST00000544531 SYNJ1O43426 1573 aa28.12■■■□□ 2.09
ECHDC2-226ENST00000544531 ABCA5Q8WWZ7 1642 aa28.12■■■□□ 2.09
ECHDC2-226ENST00000544531 WRNQ14191 1432 aaPredicted RBP eCLIP28.09■■■□□ 2.09
ECHDC2-226ENST00000544531 TOP2BQ02880 1626 aa28.07■■■□□ 2.08
ECHDC2-226ENST00000544531 BIVM-ERCC5R4GMW8 1640 aa28.06■■■□□ 2.08
ECHDC2-226ENST00000544531 TRHP20396 242 aaPredicted RBP27.94■■■□□ 2.06
ECHDC2-226ENST00000544531 GRIN2AQ12879 1464 aa27.91■■■□□ 2.06
ECHDC2-226ENST00000544531 ADAMTS12P58397 1594 aa27.9■■■□□ 2.06
ECHDC2-226ENST00000544531 FHAD1B1AJZ9 1412 aa27.83■■■□□ 2.05
ECHDC2-226ENST00000544531 CEP170Q5SW79 1584 aa27.82■■■□□ 2.04
ECHDC2-226ENST00000544531 ERICH3Q5RHP9 1530 aa27.8■■■□□ 2.04
ECHDC2-226ENST00000544531 ERCC6L2Q5T890 1561 aa27.79■■■□□ 2.04
ECHDC2-226ENST00000544531 NUP160Q12769 1436 aa27.79■■■□□ 2.04
ECHDC2-226ENST00000544531 SHROOM2Q13796 1616 aa27.65■■■□□ 2.02
ECHDC2-226ENST00000544531 JPH4Q96JJ6 628 aa27.57■■■□□ 2
ECHDC2-226ENST00000544531 PRG4Q92954 1404 aaPredicted RBP27.57■■■□□ 2
ECHDC2-226ENST00000544531 IGF1RP08069 1367 aa27.54■■■□□ 2
ECHDC2-226ENST00000544531 KIF27Q86VH2 1401 aa27.54■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms