RNA–Protein interactions for RNA: ENST00000399568.5

C22orf39-203, Transcript of chromosome 22 open reading frame 39, humanhuman

TSL 1 (best) BASIC

Gene C22orf39, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C22orf39-203ENST00000399568 NISCHQ9Y2I1 1504 aa42.39■■■■■ 4.38
C22orf39-203ENST00000399568 ABCC9O60706 1549 aa37.89■■■■□ 3.66
C22orf39-203ENST00000399568 CCDC180Q9P1Z9 1646 aa37.88■■■■□ 3.65
C22orf39-203ENST00000399568 AEBP2Q6ZN18 517 aaPredicted RBP36.25■■■■□ 3.39
C22orf39-203ENST00000399568 RB1CC1Q8TDY2 1594 aa36.09■■■■□ 3.37
C22orf39-203ENST00000399568 NACADO15069 1562 aa35.89■■■■□ 3.34
C22orf39-203ENST00000399568 DCAF8L2P0C7V8 631 aa35.78■■■■□ 3.32
C22orf39-203ENST00000399568 DNAJC5BQ9UF47 199 aa35.62■■■■□ 3.29
C22orf39-203ENST00000399568 MYO15BQ96JP2 1530 aa35.49■■■■□ 3.27
C22orf39-203ENST00000399568 PABPN1Q86U42 306 aaKnown RBP eCLIP35.37■■■■□ 3.25
C22orf39-203ENST00000399568 UNC13AQ9UPW8 1703 aa35.13■■■■□ 3.21
C22orf39-203ENST00000399568 ZCCHC6Q5VYS8 1495 aaKnown RBP35.12■■■■□ 3.21
C22orf39-203ENST00000399568 BICRAQ9NZM4 1560 aa35.05■■■■□ 3.2
C22orf39-203ENST00000399568 DCAF1Q9Y4B6 1507 aa35.05■■■■□ 3.2
C22orf39-203ENST00000399568 SHROOM4Q9ULL8 1493 aa34.62■■■■□ 3.13
C22orf39-203ENST00000399568 SCRIBQ14160 1630 aa34.52■■■■□ 3.12
C22orf39-203ENST00000399568 CHIC1Q5VXU3 224 aa34.34■■■■□ 3.09
C22orf39-203ENST00000399568 CC2D2AQ9P2K1 1620 aa34.2■■■■□ 3.07
C22orf39-203ENST00000399568 EIF4G1Q04637 1599 aaKnown RBP34.17■■■■□ 3.06
C22orf39-203ENST00000399568 CECR2Q9BXF3 1484 aa34.14■■■■□ 3.06
C22orf39-203ENST00000399568 NCAPD3P42695 1498 aa33.22■■■□□ 2.91
C22orf39-203ENST00000399568 ATAD2BQ9ULI0 1458 aa33.08■■■□□ 2.89
C22orf39-203ENST00000399568 SMARCA4P51532 1647 aa32.98■■■□□ 2.87
C22orf39-203ENST00000399568 SMARCA2P51531 1590 aa32.94■■■□□ 2.86
C22orf39-203ENST00000399568 HMGXB3Q12766 1538 aa32.87■■■□□ 2.85
C22orf39-203ENST00000399568 BAZ1AQ9NRL2 1556 aaPredicted RBP32.87■■■□□ 2.85
C22orf39-203ENST00000399568 PEG3Q9GZU2 1588 aa32.71■■■□□ 2.83
C22orf39-203ENST00000399568 BAZ1BQ9UIG0 1483 aaKnown RBP32.71■■■□□ 2.83
C22orf39-203ENST00000399568 ERCC6Q03468 1493 aa32.69■■■□□ 2.82
C22orf39-203ENST00000399568 DNAJC5Q9H3Z4 198 aa32.67■■■□□ 2.82
C22orf39-203ENST00000399568 CUX2O14529 1486 aa32.66■■■□□ 2.82
C22orf39-203ENST00000399568 MROH2BQ7Z745 1585 aa32.65■■■□□ 2.82
C22orf39-203ENST00000399568 NESP48681 1621 aa32.58■■■□□ 2.81
C22orf39-203ENST00000399568 LAMC3Q9Y6N6 1575 aa32.36■■■□□ 2.77
C22orf39-203ENST00000399568 PDS5BQ9NTI5 1447 aa32.24■■■□□ 2.75
C22orf39-203ENST00000399568 CADPSQ9ULU8 1353 aa32.21■■■□□ 2.75
C22orf39-203ENST00000399568 WIZO95785 1651 aa32.18■■■□□ 2.74
C22orf39-203ENST00000399568 THOC2Q8NI27 1593 aaKnown RBP32.16■■■□□ 2.74
C22orf39-203ENST00000399568 RSF1Q96T23 1441 aaPredicted RBP32.06■■■□□ 2.72
C22orf39-203ENST00000399568 KIF21AQ7Z4S6 1674 aa32.03■■■□□ 2.72
C22orf39-203ENST00000399568 MRC2Q9UBG0 1479 aa31.9■■■□□ 2.7
C22orf39-203ENST00000399568 CFTRP13569 1480 aa31.84■■■□□ 2.69
C22orf39-203ENST00000399568 TOP2AP11388 1531 aaKnown RBP31.82■■■□□ 2.68
C22orf39-203ENST00000399568 WDR62O43379 1518 aa31.8■■■□□ 2.68
C22orf39-203ENST00000399568 FANCD2Q9BXW9 1451 aa31.78■■■□□ 2.68
C22orf39-203ENST00000399568 CEP164Q9UPV0 1460 aa31.77■■■□□ 2.68
C22orf39-203ENST00000399568 CCDC88BA6NC98 1476 aa31.53■■■□□ 2.64
C22orf39-203ENST00000399568 URB2Q14146 1524 aaKnown RBP31.5■■■□□ 2.63
C22orf39-203ENST00000399568 OSCARQ8IYS5 282 aa31.28■■■□□ 2.6
C22orf39-203ENST00000399568 PRDM2Q13029 1718 aa31.27■■■□□ 2.6
C22orf39-203ENST00000399568 IFT140Q96RY7 1462 aa31.18■■■□□ 2.58
C22orf39-203ENST00000399568 TOPBP1Q92547 1522 aa31.17■■■□□ 2.58
C22orf39-203ENST00000399568 SENP3Q9H4L4 574 aaPredicted RBP31.16■■■□□ 2.58
C22orf39-203ENST00000399568 ABCC8Q09428 1581 aa31.16■■■□□ 2.58
C22orf39-203ENST00000399568 TRIM41Q8WV44 630 aa31.15■■■□□ 2.58
C22orf39-203ENST00000399568 ZNF608Q9ULD9 1512 aaPredicted RBP31.1■■■□□ 2.57
C22orf39-203ENST00000399568 DNMBPQ6XZF7 1577 aa31.03■■■□□ 2.56
C22orf39-203ENST00000399568 AQRO60306 1485 aaKnown RBP eCLIP30.87■■■□□ 2.531e-7■■□□□ 13.1
C22orf39-203ENST00000399568 TARBP1Q13395 1621 aaKnown RBP30.87■■■□□ 2.53
C22orf39-203ENST00000399568 POLA1P09884 1462 aaPredicted RBP30.86■■■□□ 2.53
C22orf39-203ENST00000399568 EIF4G3O43432 1585 aaKnown RBP30.84■■■□□ 2.53
C22orf39-203ENST00000399568 SOGA1O94964 1423 aa30.78■■■□□ 2.52
C22orf39-203ENST00000399568 RAD54L2Q9Y4B4 1467 aa30.76■■■□□ 2.51
C22orf39-203ENST00000399568 TDRD9Q8NDG6 1382 aaKnown RBP30.7■■■□□ 2.51
C22orf39-203ENST00000399568 RIMBP3CA6NJZ7 1639 aa30.69■■■□□ 2.5
C22orf39-203ENST00000399568 RIMBP3BA6NNM3 1639 aa30.69■■■□□ 2.5
C22orf39-203ENST00000399568 RIMBP3Q9UFD9 1639 aa30.69■■■□□ 2.5
C22orf39-203ENST00000399568 SUPT5HO00267 1087 aaKnown RBP30.67■■■□□ 2.5
C22orf39-203ENST00000399568 FGD5Q6ZNL6 1462 aa30.66■■■□□ 2.5
C22orf39-203ENST00000399568 CUX1P39880 1505 aa30.65■■■□□ 2.5
C22orf39-203ENST00000399568 ARHGEF11O15085 1522 aa30.64■■■□□ 2.5
C22orf39-203ENST00000399568 FBLN2P98095 1184 aa30.64■■■□□ 2.5
C22orf39-203ENST00000399568 PHF23Q9BUL5 403 aaPredicted RBP30.63■■■□□ 2.49
C22orf39-203ENST00000399568 WDR97A6NE52 1622 aa30.56■■■□□ 2.48
C22orf39-203ENST00000399568 CHD1O14646 1710 aa30.54■■■□□ 2.48
C22orf39-203ENST00000399568 CYB5RLQ6IPT4 315 aa30.51■■■□□ 2.47
C22orf39-203ENST00000399568 SNAPC4Q5SXM2 1469 aa30.5■■■□□ 2.47
C22orf39-203ENST00000399568 GRIN2BQ13224 1484 aa30.47■■■□□ 2.47
C22orf39-203ENST00000399568 CHMP7Q8WUX9 453 aaPredicted RBP30.47■■■□□ 2.47
C22orf39-203ENST00000399568 MAGI1Q96QZ7 1491 aaPredicted RBP30.44■■■□□ 2.46
C22orf39-203ENST00000399568 GAPVD1Q14C86 1478 aa30.37■■■□□ 2.45
C22orf39-203ENST00000399568 ARAP1Q96P48 1450 aa30.36■■■□□ 2.45
C22orf39-203ENST00000399568 ABCA10Q8WWZ4 1543 aa30.36■■■□□ 2.45
C22orf39-203ENST00000399568 SYNJ2O15056 1496 aa30.35■■■□□ 2.45
C22orf39-203ENST00000399568 CLASP1Q7Z460 1538 aa30.32■■■□□ 2.44
C22orf39-203ENST00000399568 SYNJ1O43426 1573 aa30.28■■■□□ 2.44
C22orf39-203ENST00000399568 WRNQ14191 1432 aaPredicted RBP eCLIP30.27■■■□□ 2.445e-6■■□□□ 12.5
C22orf39-203ENST00000399568 ABCA5Q8WWZ7 1642 aa30.22■■■□□ 2.43
C22orf39-203ENST00000399568 PBRM1Q86U86 1689 aa30.18■■■□□ 2.42
C22orf39-203ENST00000399568 TOP2BQ02880 1626 aa30.16■■■□□ 2.42
C22orf39-203ENST00000399568 BIVM-ERCC5R4GMW8 1640 aa30.13■■■□□ 2.41
C22orf39-203ENST00000399568 TRHP20396 242 aaPredicted RBP30.1■■■□□ 2.41
C22orf39-203ENST00000399568 GRIN2AQ12879 1464 aa30.06■■■□□ 2.4
C22orf39-203ENST00000399568 FHAD1B1AJZ9 1412 aa30.01■■■□□ 2.39
C22orf39-203ENST00000399568 NUP160Q12769 1436 aa29.99■■■□□ 2.39
C22orf39-203ENST00000399568 ADAMTS12P58397 1594 aa29.98■■■□□ 2.39
C22orf39-203ENST00000399568 ERICH3Q5RHP9 1530 aa29.96■■■□□ 2.39
C22orf39-203ENST00000399568 CEP170Q5SW79 1584 aa29.9■■■□□ 2.38
C22orf39-203ENST00000399568 ERCC6L2Q5T890 1561 aa29.84■■■□□ 2.37
C22orf39-203ENST00000399568 SHROOM2Q13796 1616 aa29.77■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms