RNA–Protein interactions for RNA: ENST00000440114.1

HSPD1-208, Transcript of heat shock protein family D (Hsp60) member 1, humanhuman

TSL 5

Gene HSPD1, Length 619 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPD1-208ENST00000440114 NISCHQ9Y2I1 1504 aa20.31■□□□□ 0.84
HSPD1-208ENST00000440114 ABCC9O60706 1549 aa18.96■□□□□ 0.63
HSPD1-208ENST00000440114 CCDC180Q9P1Z9 1646 aa18.4■□□□□ 0.54
HSPD1-208ENST00000440114 DNAJC5BQ9UF47 199 aa18.34■□□□□ 0.53
HSPD1-208ENST00000440114 RB1CC1Q8TDY2 1594 aa17.78■□□□□ 0.44
HSPD1-208ENST00000440114 PABPN1Q86U42 306 aaKnown RBP eCLIP17.63■□□□□ 0.41
HSPD1-208ENST00000440114 NACADO15069 1562 aa17.53■□□□□ 0.4
HSPD1-208ENST00000440114 UNC13AQ9UPW8 1703 aa17.47■□□□□ 0.39
HSPD1-208ENST00000440114 DCAF8L2P0C7V8 631 aa17.45■□□□□ 0.38
HSPD1-208ENST00000440114 BICRAQ9NZM4 1560 aa17.33■□□□□ 0.37
HSPD1-208ENST00000440114 DNAJC5Q9H3Z4 198 aa17.16■□□□□ 0.34
HSPD1-208ENST00000440114 CECR2Q9BXF3 1484 aa17.12■□□□□ 0.33
HSPD1-208ENST00000440114 CC2D2AQ9P2K1 1620 aa17.1■□□□□ 0.33
HSPD1-208ENST00000440114 MYO15BQ96JP2 1530 aa17.08■□□□□ 0.32
HSPD1-208ENST00000440114 SHROOM4Q9ULL8 1493 aa16.91■□□□□ 0.3
HSPD1-208ENST00000440114 EIF4G1Q04637 1599 aaKnown RBP16.9■□□□□ 0.3
HSPD1-208ENST00000440114 SCRIBQ14160 1630 aa16.78■□□□□ 0.28
HSPD1-208ENST00000440114 DCAF1Q9Y4B6 1507 aa16.7■□□□□ 0.26
HSPD1-208ENST00000440114 ZCCHC6Q5VYS8 1495 aaKnown RBP16.68■□□□□ 0.26
HSPD1-208ENST00000440114 CUX2O14529 1486 aa16.48■□□□□ 0.23
HSPD1-208ENST00000440114 ERCC6Q03468 1493 aa16.36■□□□□ 0.21
HSPD1-208ENST00000440114 NCAPD3P42695 1498 aa16.21■□□□□ 0.19
HSPD1-208ENST00000440114 TRIM41Q8WV44 630 aa16.2■□□□□ 0.18
HSPD1-208ENST00000440114 NESP48681 1621 aa16.16■□□□□ 0.18
HSPD1-208ENST00000440114 ATAD2BQ9ULI0 1458 aa16.1■□□□□ 0.17
HSPD1-208ENST00000440114 THOC2Q8NI27 1593 aaKnown RBP16.04■□□□□ 0.16
HSPD1-208ENST00000440114 HMGXB3Q12766 1538 aa15.99■□□□□ 0.15
HSPD1-208ENST00000440114 SMARCA2P51531 1590 aa15.98■□□□□ 0.15
HSPD1-208ENST00000440114 SMARCA4P51532 1647 aa15.94■□□□□ 0.14
HSPD1-208ENST00000440114 KIF21AQ7Z4S6 1674 aa15.93■□□□□ 0.14
HSPD1-208ENST00000440114 LAMC3Q9Y6N6 1575 aa15.9■□□□□ 0.14
HSPD1-208ENST00000440114 BAZ1BQ9UIG0 1483 aaKnown RBP15.88■□□□□ 0.13
HSPD1-208ENST00000440114 PDS5BQ9NTI5 1447 aa15.83■□□□□ 0.12
HSPD1-208ENST00000440114 PEG3Q9GZU2 1588 aa15.76■□□□□ 0.11
HSPD1-208ENST00000440114 BAZ1AQ9NRL2 1556 aaPredicted RBP15.75■□□□□ 0.11
HSPD1-208ENST00000440114 OSCARQ8IYS5 282 aa15.73■□□□□ 0.11
HSPD1-208ENST00000440114 MRC2Q9UBG0 1479 aa15.72■□□□□ 0.11
HSPD1-208ENST00000440114 CADPSQ9ULU8 1353 aa15.7■□□□□ 0.1
HSPD1-208ENST00000440114 WDR62O43379 1518 aa15.69■□□□□ 0.1
HSPD1-208ENST00000440114 MROH2BQ7Z745 1585 aa15.66■□□□□ 0.1
HSPD1-208ENST00000440114 RIMBP3CA6NJZ7 1639 aa15.57■□□□□ 0.08
HSPD1-208ENST00000440114 RIMBP3BA6NNM3 1639 aa15.57■□□□□ 0.08
HSPD1-208ENST00000440114 RIMBP3Q9UFD9 1639 aa15.57■□□□□ 0.08
HSPD1-208ENST00000440114 CEP164Q9UPV0 1460 aa15.55■□□□□ 0.08
HSPD1-208ENST00000440114 FANCD2Q9BXW9 1451 aa15.52■□□□□ 0.07
HSPD1-208ENST00000440114 WIZO95785 1651 aa15.48■□□□□ 0.07
HSPD1-208ENST00000440114 URB2Q14146 1524 aaKnown RBP15.44■□□□□ 0.06
HSPD1-208ENST00000440114 ARHGEF11O15085 1522 aa15.43■□□□□ 0.06
HSPD1-208ENST00000440114 CYB5RLQ6IPT4 315 aa15.42■□□□□ 0.06
HSPD1-208ENST00000440114 CFTRP13569 1480 aa15.4■□□□□ 0.06
HSPD1-208ENST00000440114 TRHP20396 242 aaPredicted RBP15.4■□□□□ 0.06
HSPD1-208ENST00000440114 ZNF608Q9ULD9 1512 aaPredicted RBP15.34■□□□□ 0.05
HSPD1-208ENST00000440114 AEBP2Q6ZN18 517 aaPredicted RBP15.31■□□□□ 0.04
HSPD1-208ENST00000440114 IFT140Q96RY7 1462 aa15.27■□□□□ 0.03
HSPD1-208ENST00000440114 ARAP1Q96P48 1450 aa15.26■□□□□ 0.03
HSPD1-208ENST00000440114 CHD1O14646 1710 aa15.23■□□□□ 0.03
HSPD1-208ENST00000440114 PRDM2Q13029 1718 aa15.22■□□□□ 0.03
HSPD1-208ENST00000440114 EIF4G3O43432 1585 aaKnown RBP15.19■□□□□ 0.02
HSPD1-208ENST00000440114 TOP2AP11388 1531 aaKnown RBP15.17■□□□□ 0.02
HSPD1-208ENST00000440114 TOPBP1Q92547 1522 aa15.17■□□□□ 0.02
HSPD1-208ENST00000440114 FBLN2P98095 1184 aa15.17■□□□□ 0.02
HSPD1-208ENST00000440114 AQRO60306 1485 aaKnown RBP eCLIP15.16■□□□□ 0.022e-11■■■■■ 28.4
HSPD1-208ENST00000440114 RSF1Q96T23 1441 aaPredicted RBP15.15■□□□□ 0.02
HSPD1-208ENST00000440114 TARBP1Q13395 1621 aaKnown RBP15.09■□□□□ 0.01
HSPD1-208ENST00000440114 ABCC8Q09428 1581 aa15.07■□□□□ 0
HSPD1-208ENST00000440114 CCDC88BA6NC98 1476 aa15.07■□□□□ 0
HSPD1-208ENST00000440114 DNMBPQ6XZF7 1577 aa15.04■□□□□ -0
HSPD1-208ENST00000440114 CLASP1Q7Z460 1538 aa14.99□□□□□ -0.01
HSPD1-208ENST00000440114 TDRD9Q8NDG6 1382 aaKnown RBP14.98□□□□□ -0.01
HSPD1-208ENST00000440114 POLA1P09884 1462 aaPredicted RBP14.97□□□□□ -0.01
HSPD1-208ENST00000440114 RAD54L2Q9Y4B4 1467 aa14.97□□□□□ -0.01
HSPD1-208ENST00000440114 CHMP7Q8WUX9 453 aaPredicted RBP14.95□□□□□ -0.02
HSPD1-208ENST00000440114 SNAPC4Q5SXM2 1469 aa14.94□□□□□ -0.02
HSPD1-208ENST00000440114 SOGA1O94964 1423 aa14.92□□□□□ -0.02
HSPD1-208ENST00000440114 SYNJ1O43426 1573 aa14.91□□□□□ -0.02
HSPD1-208ENST00000440114 GAPVD1Q14C86 1478 aa14.88□□□□□ -0.03
HSPD1-208ENST00000440114 MAGI1Q96QZ7 1491 aaPredicted RBP14.84□□□□□ -0.03
HSPD1-208ENST00000440114 SYNJ2O15056 1496 aa14.82□□□□□ -0.04
HSPD1-208ENST00000440114 GRIN2BQ13224 1484 aa14.82□□□□□ -0.04
HSPD1-208ENST00000440114 WDR97A6NE52 1622 aa14.81□□□□□ -0.04
HSPD1-208ENST00000440114 FGD5Q6ZNL6 1462 aa14.81□□□□□ -0.04
HSPD1-208ENST00000440114 ERCC6L2Q5T890 1561 aa14.78□□□□□ -0.04
HSPD1-208ENST00000440114 KIF13AQ9H1H9 1805 aa14.76□□□□□ -0.05
HSPD1-208ENST00000440114 ILDR1Q86SU0 546 aaPredicted RBP14.75□□□□□ -0.05
HSPD1-208ENST00000440114 PBRM1Q86U86 1689 aa14.74□□□□□ -0.05
HSPD1-208ENST00000440114 CUX1P39880 1505 aa14.74□□□□□ -0.05
HSPD1-208ENST00000440114 CEP170Q5SW79 1584 aa14.66□□□□□ -0.06
HSPD1-208ENST00000440114 KDM4FA0A1W2PPD8 638 aa14.66□□□□□ -0.06
HSPD1-208ENST00000440114 GRIN2AQ12879 1464 aa14.63□□□□□ -0.07
HSPD1-208ENST00000440114 ABCA5Q8WWZ7 1642 aa14.63□□□□□ -0.07
HSPD1-208ENST00000440114 FAM69CQ0P6D2 419 aa14.61□□□□□ -0.07
HSPD1-208ENST00000440114 SHROOM2Q13796 1616 aa14.6□□□□□ -0.07
HSPD1-208ENST00000440114 ABCA10Q8WWZ4 1543 aa14.6□□□□□ -0.07
HSPD1-208ENST00000440114 NUP160Q12769 1436 aa14.59□□□□□ -0.07
HSPD1-208ENST00000440114 ABCC10Q5T3U5 1492 aa14.55□□□□□ -0.08
HSPD1-208ENST00000440114 ADAMTS12P58397 1594 aa14.54□□□□□ -0.08
HSPD1-208ENST00000440114 PRG4Q92954 1404 aaPredicted RBP14.53□□□□□ -0.08
HSPD1-208ENST00000440114 TSPOAP1O95153 1857 aa14.52□□□□□ -0.09
HSPD1-208ENST00000440114 NPM1P06748 294 aaKnown RBP eCLIP14.51□□□□□ -0.09
HSPD1-208ENST00000440114 JPH4Q96JJ6 628 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms