RNA–Protein interactions for RNA: ENST00000378565.9

ITM2B-202, Transcript of integral membrane protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ITM2B, Length 10,137 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2B-202ENST00000378565 PELP1Q8IZL8 1130 aaKnown RBP18.86■□□□□ 0.61
ITM2B-202ENST00000378565 MYT1Q01538 1121 aa18.3■□□□□ 0.52
ITM2B-202ENST00000378565 DCAF8L2P0C7V8 631 aa18.21■□□□□ 0.51
ITM2B-202ENST00000378565 ERICH6Q7L0X2 663 aa17.97■□□□□ 0.47
ITM2B-202ENST00000378565 CCER1Q8TC90 406 aaPredicted RBP17.9■□□□□ 0.46
ITM2B-202ENST00000378565 CENPBP07199 599 aaPredicted RBP17.79■□□□□ 0.44
ITM2B-202ENST00000378565 SUPT5HO00267 1087 aaKnown RBP17.78■□□□□ 0.44
ITM2B-202ENST00000378565 APLP2Q06481 763 aa17.44■□□□□ 0.38
ITM2B-202ENST00000378565 ZEB1P37275 1124 aaPredicted RBP17.43■□□□□ 0.38
ITM2B-202ENST00000378565 PCGF6Q9BYE7 350 aa17.39■□□□□ 0.37
ITM2B-202ENST00000378565 EHMT2Q96KQ7 1210 aa17.38■□□□□ 0.37
ITM2B-202ENST00000378565 NEFLP07196 543 aa17.35■□□□□ 0.37
ITM2B-202ENST00000378565 YTHDC1Q96MU7 727 aaKnown RBP17.23■□□□□ 0.35
ITM2B-202ENST00000378565 SHROOM4Q9ULL8 1493 aa17.2■□□□□ 0.34
ITM2B-202ENST00000378565 TTBK1Q5TCY1 1321 aaPredicted RBP17.18■□□□□ 0.34
ITM2B-202ENST00000378565 DAXXQ9UER7 740 aaPredicted RBP17.04■□□□□ 0.32
ITM2B-202ENST00000378565 FAM9AQ8IZU1 332 aaPredicted RBP16.89■□□□□ 0.29
ITM2B-202ENST00000378565 NISCHQ9Y2I1 1504 aa16.8■□□□□ 0.28
ITM2B-202ENST00000378565 RTL5Q5HYW3 569 aaPredicted RBP16.79■□□□□ 0.28
ITM2B-202ENST00000378565 ZNF316A6NFI3 1004 aaPredicted RBP16.62■□□□□ 0.25
ITM2B-202ENST00000378565 HRCP23327 699 aa16.58■□□□□ 0.25
ITM2B-202ENST00000378565 TRIM26Q12899 539 aaPredicted RBP16.51■□□□□ 0.23
ITM2B-202ENST00000378565 RANGAP1P46060 587 aaPredicted RBP16.49■□□□□ 0.23
ITM2B-202ENST00000378565 TRIM41Q8WV44 630 aa16.48■□□□□ 0.23
ITM2B-202ENST00000378565 ATP1B4Q9UN42 357 aaPredicted RBP16.41■□□□□ 0.22
ITM2B-202ENST00000378565 UBTFP17480 764 aaKnown RBP16.4■□□□□ 0.22
ITM2B-202ENST00000378565 CLSPNQ9HAW4 1339 aa16.32■□□□□ 0.2
ITM2B-202ENST00000378565 GLIPR1L2Q4G1C9 344 aa16.27■□□□□ 0.19
ITM2B-202ENST00000378565 DIEXFQ68CQ4 756 aaKnown RBP16.26■□□□□ 0.19
ITM2B-202ENST00000378565 POLR3GLQ9BT43 218 aa16.18■□□□□ 0.18
ITM2B-202ENST00000378565 PPARGC1BQ86YN6 1023 aaKnown RBP16.18■□□□□ 0.18
ITM2B-202ENST00000378565 GTF3C3Q9Y5Q9 886 aa16.16■□□□□ 0.18
ITM2B-202ENST00000378565 CDK11AQ9UQ88 783 aaPredicted RBP16.15■□□□□ 0.18
ITM2B-202ENST00000378565 EIF5BO60841 1220 aaKnown RBP16.14■□□□□ 0.17
ITM2B-202ENST00000378565 ANP32AP39687 249 aaKnown RBP16.02■□□□□ 0.15
ITM2B-202ENST00000378565 BCANQ96GW7 911 aa16.02■□□□□ 0.15
ITM2B-202ENST00000378565 MYT1LQ9UL68 1186 aa16.01■□□□□ 0.15
ITM2B-202ENST00000378565 CNGB1Q14028 1251 aaPredicted RBP15.98■□□□□ 0.15
ITM2B-202ENST00000378565 ITGAEP38570 1179 aa15.96■□□□□ 0.15
ITM2B-202ENST00000378565 ANP32BQ92688 251 aaKnown RBP15.95■□□□□ 0.14
ITM2B-202ENST00000378565 HNRNPUL2Q1KMD3 747 aaKnown RBP15.91■□□□□ 0.14
ITM2B-202ENST00000378565 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.88■□□□□ 0.13
ITM2B-202ENST00000378565 ZBTB47Q9UFB7 747 aaPredicted RBP15.87■□□□□ 0.13
ITM2B-202ENST00000378565 ACIN1Q9UKV3 1341 aaKnown RBP15.85■□□□□ 0.13
ITM2B-202ENST00000378565 SLC4A1APQ9BWU0 796 aaKnown RBP15.84■□□□□ 0.13
ITM2B-202ENST00000378565 ANP32CO43423 234 aa15.82■□□□□ 0.12
ITM2B-202ENST00000378565 CANXP27824 592 aaKnown RBP15.72■□□□□ 0.11
ITM2B-202ENST00000378565 LOC105371045A0A1W2PR82 267 aa15.71■□□□□ 0.11
ITM2B-202ENST00000378565 NPM2Q86SE8 214 aaKnown RBP15.69■□□□□ 0.1
ITM2B-202ENST00000378565 HSP90AA1P07900 732 aaKnown RBP15.66■□□□□ 0.1
ITM2B-202ENST00000378565 NBR1Q14596 966 aa15.61■□□□□ 0.09
ITM2B-202ENST00000378565 UPF2Q9HAU5 1272 aaKnown RBP15.6■□□□□ 0.09
ITM2B-202ENST00000378565 TNNT2P45379 298 aaPredicted RBP15.58■□□□□ 0.09
ITM2B-202ENST00000378565 CHIC1Q5VXU3 224 aa15.56■□□□□ 0.08
ITM2B-202ENST00000378565 NEUROD1Q13562 356 aa15.54■□□□□ 0.08
ITM2B-202ENST00000378565 BCL11AQ9H165 835 aa15.52■□□□□ 0.07
ITM2B-202ENST00000378565 FAM50AQ14320 339 aaKnown RBP15.51■□□□□ 0.07
ITM2B-202ENST00000378565 FKBP8Q14318 412 aa15.5■□□□□ 0.07
ITM2B-202ENST00000378565 TRIM52Q96A61 297 aa15.45■□□□□ 0.06
ITM2B-202ENST00000378565 NEFMP07197 916 aa15.44■□□□□ 0.06
ITM2B-202ENST00000378565 ARXQ96QS3 562 aa15.43■□□□□ 0.06
ITM2B-202ENST00000378565 ZNF326Q5BKZ1 582 aaKnown RBP15.41■□□□□ 0.06
ITM2B-202ENST00000378565 TRIM44Q96DX7 344 aaPredicted RBP15.38■□□□□ 0.05
ITM2B-202ENST00000378565 SLC24A1O60721 1099 aa15.35■□□□□ 0.05
ITM2B-202ENST00000378565 ANP32EQ9BTT0 268 aa15.35■□□□□ 0.05
ITM2B-202ENST00000378565 CCDC136Q96JN2 1154 aa15.33■□□□□ 0.05
ITM2B-202ENST00000378565 CDK11BP21127 795 aaKnown RBP15.33■□□□□ 0.04
ITM2B-202ENST00000378565 SCAF1Q9H7N4 1312 aaKnown RBP15.32■□□□□ 0.04
ITM2B-202ENST00000378565 ERICH6BQ5W0A0 696 aa15.31■□□□□ 0.04
ITM2B-202ENST00000378565 HNRNPUQ00839 825 aaKnown RBP eCLIP15.28■□□□□ 0.04
ITM2B-202ENST00000378565 DDRGK1Q96HY6 314 aa15.27■□□□□ 0.03
ITM2B-202ENST00000378565 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.26■□□□□ 0.03
ITM2B-202ENST00000378565 BECN1Q14457 450 aa15.25■□□□□ 0.03
ITM2B-202ENST00000378565 NAP1L5Q96NT1 182 aaPredicted RBP15.22■□□□□ 0.03
ITM2B-202ENST00000378565 GOLGA6L22H0YM25 854 aa15.19■□□□□ 0.02
ITM2B-202ENST00000378565 NCLP19338 710 aaKnown RBP15.17■□□□□ 0.02
ITM2B-202ENST00000378565 DNTTIP2Q5QJE6 756 aaKnown RBP15.16■□□□□ 0.02
ITM2B-202ENST00000378565 PTMAP06454 111 aaKnown RBP15.14■□□□□ 0.01
ITM2B-202ENST00000378565 TONSLQ96HA7 1378 aa15.12■□□□□ 0.01
ITM2B-202ENST00000378565 FAM9BQ8IZU0 186 aa15.12■□□□□ 0.01
ITM2B-202ENST00000378565 DCAF1Q9Y4B6 1507 aa15.11■□□□□ 0.01
ITM2B-202ENST00000378565 RTN4Q9NQC3 1192 aaKnown RBP15.1■□□□□ 0.01
ITM2B-202ENST00000378565 PPM1GO15355 546 aaPredicted RBP15.07■□□□□ 0
ITM2B-202ENST00000378565 MYH16Q9H6N6 1097 aa15.07■□□□□ 0
ITM2B-202ENST00000378565 TMC1Q8TDI8 760 aa15.04■□□□□ -0
ITM2B-202ENST00000378565 DDX10Q13206 875 aaKnown RBP15.03■□□□□ -0
ITM2B-202ENST00000378565 ZRSR1Q15695 479 aaKnown RBP15.02■□□□□ -0
ITM2B-202ENST00000378565 CCDC180Q9P1Z9 1646 aa15.01□□□□□ -0.01
ITM2B-202ENST00000378565 CHAF1AQ13111 956 aaPredicted RBP15□□□□□ -0.01
ITM2B-202ENST00000378565 NOP58Q9Y2X3 529 aaKnown RBP15□□□□□ -0.01
ITM2B-202ENST00000378565 IRX6P78412 446 aaPredicted RBP14.99□□□□□ -0.01
ITM2B-202ENST00000378565 SALL2Q9Y467 1007 aaPredicted RBP14.96□□□□□ -0.01
ITM2B-202ENST00000378565 MRS2Q9HD23 443 aa14.96□□□□□ -0.01
ITM2B-202ENST00000378565 GOLGA6L6A8MZA4 724 aa14.95□□□□□ -0.02
ITM2B-202ENST00000378565 WDR43Q15061 677 aaKnown RBP eCLIP14.95□□□□□ -0.02
ITM2B-202ENST00000378565 AMER1Q5JTC6 1135 aaPredicted RBP14.93□□□□□ -0.02
ITM2B-202ENST00000378565 MIER1Q8N108 512 aa14.92□□□□□ -0.02
ITM2B-202ENST00000378565 LAS1LQ9Y4W2 734 aaKnown RBP14.91□□□□□ -0.02
ITM2B-202ENST00000378565 MSNP26038 577 aaKnown RBP14.91□□□□□ -0.02
ITM2B-202ENST00000378565 DEKP35659 375 aaKnown RBP14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 6.6 ms