RNA–Protein interactions for RNA: ENST00000498529.5

CSNK1E-214, Transcript of casein kinase 1 epsilon, humanhuman

TSL 3

Gene CSNK1E, Length 381 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-214ENST00000498529 AEBP2Q6ZN18 517 aaPredicted RBP16.23■□□□□ 0.19
CSNK1E-214ENST00000498529 CHIC1Q5VXU3 224 aa15.31■□□□□ 0.04
CSNK1E-214ENST00000498529 NISCHQ9Y2I1 1504 aa14.9□□□□□ -0.02
CSNK1E-214ENST00000498529 SENP3Q9H4L4 574 aaPredicted RBP14.09□□□□□ -0.15
CSNK1E-214ENST00000498529 PHF23Q9BUL5 403 aaPredicted RBP13.75□□□□□ -0.21
CSNK1E-214ENST00000498529 CCDC180Q9P1Z9 1646 aa13.62□□□□□ -0.23
CSNK1E-214ENST00000498529 POTEDQ86YR6 584 aa13.59□□□□□ -0.23
CSNK1E-214ENST00000498529 ABCC9O60706 1549 aa13.54□□□□□ -0.24
CSNK1E-214ENST00000498529 FOXD1Q16676 465 aa13.14□□□□□ -0.31
CSNK1E-214ENST00000498529 RB1CC1Q8TDY2 1594 aa12.9□□□□□ -0.34
CSNK1E-214ENST00000498529 DNAJC5BQ9UF47 199 aa12.87□□□□□ -0.35
CSNK1E-214ENST00000498529 UNC13AQ9UPW8 1703 aa12.86□□□□□ -0.35
CSNK1E-214ENST00000498529 NACADO15069 1562 aa12.79□□□□□ -0.36
CSNK1E-214ENST00000498529 MSH5O43196 834 aa12.69□□□□□ -0.38
CSNK1E-214ENST00000498529 BICRAQ9NZM4 1560 aa12.67□□□□□ -0.38
CSNK1E-214ENST00000498529 MYO15BQ96JP2 1530 aa12.62□□□□□ -0.39
CSNK1E-214ENST00000498529 SHROOM4Q9ULL8 1493 aa12.45□□□□□ -0.42
CSNK1E-214ENST00000498529 PABPN1Q86U42 306 aaKnown RBP eCLIP12.42□□□□□ -0.42
CSNK1E-214ENST00000498529 DCAF1Q9Y4B6 1507 aa12.38□□□□□ -0.43
CSNK1E-214ENST00000498529 ZCCHC6Q5VYS8 1495 aaKnown RBP12.37□□□□□ -0.43
CSNK1E-214ENST00000498529 CC2D2AQ9P2K1 1620 aa12.35□□□□□ -0.43
CSNK1E-214ENST00000498529 EIF4G1Q04637 1599 aaKnown RBP12.29□□□□□ -0.44
CSNK1E-214ENST00000498529 SCRIBQ14160 1630 aa12.23□□□□□ -0.45
CSNK1E-214ENST00000498529 CECR2Q9BXF3 1484 aa12.23□□□□□ -0.45
CSNK1E-214ENST00000498529 PLPPR3Q6T4P5 718 aa12.23□□□□□ -0.45
CSNK1E-214ENST00000498529 PIAS4Q8N2W9 510 aaPredicted RBP12.18□□□□□ -0.46
CSNK1E-214ENST00000498529 DCAF8L2P0C7V8 631 aa12.17□□□□□ -0.46
CSNK1E-214ENST00000498529 DNAJC5Q9H3Z4 198 aa11.91□□□□□ -0.5
CSNK1E-214ENST00000498529 CUX2O14529 1486 aa11.83□□□□□ -0.52
CSNK1E-214ENST00000498529 NCAPD3P42695 1498 aa11.77□□□□□ -0.52
CSNK1E-214ENST00000498529 HMGXB3Q12766 1538 aa11.76□□□□□ -0.53
CSNK1E-214ENST00000498529 THOC2Q8NI27 1593 aaKnown RBP11.74□□□□□ -0.53
CSNK1E-214ENST00000498529 SMARCA4P51532 1647 aa11.72□□□□□ -0.53
CSNK1E-214ENST00000498529 ATAD2BQ9ULI0 1458 aa11.7□□□□□ -0.54
CSNK1E-214ENST00000498529 PEG3Q9GZU2 1588 aa11.69□□□□□ -0.54
CSNK1E-214ENST00000498529 SMARCA2P51531 1590 aa11.67□□□□□ -0.54
CSNK1E-214ENST00000498529 PPP6R1Q9UPN7 881 aa11.66□□□□□ -0.54
CSNK1E-214ENST00000498529 NESP48681 1621 aa11.64□□□□□ -0.55
CSNK1E-214ENST00000498529 ADRA2BP18089 450 aa11.63□□□□□ -0.55
CSNK1E-214ENST00000498529 ERCC6Q03468 1493 aa11.63□□□□□ -0.55
CSNK1E-214ENST00000498529 KIF21AQ7Z4S6 1674 aa11.62□□□□□ -0.55
CSNK1E-214ENST00000498529 LAMC3Q9Y6N6 1575 aa11.58□□□□□ -0.55
CSNK1E-214ENST00000498529 BAZ1AQ9NRL2 1556 aaPredicted RBP11.57□□□□□ -0.56
CSNK1E-214ENST00000498529 BAZ1BQ9UIG0 1483 aaKnown RBP11.52□□□□□ -0.56
CSNK1E-214ENST00000498529 MROH2BQ7Z745 1585 aa11.47□□□□□ -0.57
CSNK1E-214ENST00000498529 WDR62O43379 1518 aa11.45□□□□□ -0.58
CSNK1E-214ENST00000498529 MRC2Q9UBG0 1479 aa11.38□□□□□ -0.59
CSNK1E-214ENST00000498529 CACNB1Q02641 598 aaPredicted RBP11.36□□□□□ -0.59
CSNK1E-214ENST00000498529 WIZO95785 1651 aa11.36□□□□□ -0.59
CSNK1E-214ENST00000498529 PDS5BQ9NTI5 1447 aa11.35□□□□□ -0.59
CSNK1E-214ENST00000498529 PRDM2Q13029 1718 aa11.35□□□□□ -0.59
CSNK1E-214ENST00000498529 CADPSQ9ULU8 1353 aa11.31□□□□□ -0.6
CSNK1E-214ENST00000498529 CEP164Q9UPV0 1460 aa11.26□□□□□ -0.61
CSNK1E-214ENST00000498529 CFTRP13569 1480 aa11.24□□□□□ -0.61
CSNK1E-214ENST00000498529 URB2Q14146 1524 aaKnown RBP11.22□□□□□ -0.61
CSNK1E-214ENST00000498529 FANCD2Q9BXW9 1451 aa11.22□□□□□ -0.61
CSNK1E-214ENST00000498529 TOP2AP11388 1531 aaKnown RBP11.2□□□□□ -0.62
CSNK1E-214ENST00000498529 RIMBP3CA6NJZ7 1639 aa11.19□□□□□ -0.62
CSNK1E-214ENST00000498529 RIMBP3BA6NNM3 1639 aa11.19□□□□□ -0.62
CSNK1E-214ENST00000498529 RIMBP3Q9UFD9 1639 aa11.19□□□□□ -0.62
CSNK1E-214ENST00000498529 TRIM41Q8WV44 630 aa11.13□□□□□ -0.63
CSNK1E-214ENST00000498529 EIF4G3O43432 1585 aaKnown RBP11.11□□□□□ -0.63
CSNK1E-214ENST00000498529 RSF1Q96T23 1441 aaPredicted RBP11.1□□□□□ -0.63
CSNK1E-214ENST00000498529 CHD1O14646 1710 aa11.09□□□□□ -0.63
CSNK1E-214ENST00000498529 ARHGEF11O15085 1522 aa11.09□□□□□ -0.63
CSNK1E-214ENST00000498529 ZNF608Q9ULD9 1512 aaPredicted RBP11.08□□□□□ -0.64
CSNK1E-214ENST00000498529 TARBP1Q13395 1621 aaKnown RBP11.06□□□□□ -0.64
CSNK1E-214ENST00000498529 IFT140Q96RY7 1462 aa11.05□□□□□ -0.64
CSNK1E-214ENST00000498529 TOPBP1Q92547 1522 aa11.04□□□□□ -0.64
CSNK1E-214ENST00000498529 DNMBPQ6XZF7 1577 aa11.02□□□□□ -0.65
CSNK1E-214ENST00000498529 OSCARQ8IYS5 282 aa11.01□□□□□ -0.65
CSNK1E-214ENST00000498529 DMRT2Q9Y5R5 561 aa11.01□□□□□ -0.65
CSNK1E-214ENST00000498529 CCDC88BA6NC98 1476 aa10.99□□□□□ -0.65
CSNK1E-214ENST00000498529 ARAP1Q96P48 1450 aa10.98□□□□□ -0.65
CSNK1E-214ENST00000498529 WDR97A6NE52 1622 aa10.96□□□□□ -0.65
CSNK1E-214ENST00000498529 CLASP1Q7Z460 1538 aa10.95□□□□□ -0.66
CSNK1E-214ENST00000498529 ABCC8Q09428 1581 aa10.94□□□□□ -0.66
CSNK1E-214ENST00000498529 POLA1P09884 1462 aaPredicted RBP10.92□□□□□ -0.66
CSNK1E-214ENST00000498529 KCNA4P22459 653 aa10.89□□□□□ -0.67
CSNK1E-214ENST00000498529 MAPK8IP2Q13387 824 aaPredicted RBP10.88□□□□□ -0.67
CSNK1E-214ENST00000498529 PBRM1Q86U86 1689 aa10.86□□□□□ -0.67
CSNK1E-214ENST00000498529 AQRO60306 1485 aaKnown RBP eCLIP10.86□□□□□ -0.677e-13■■■■■ 37
CSNK1E-214ENST00000498529 SNAPC4Q5SXM2 1469 aa10.81□□□□□ -0.68
CSNK1E-214ENST00000498529 ABCA5Q8WWZ7 1642 aa10.81□□□□□ -0.68
CSNK1E-214ENST00000498529 SYNJ1O43426 1573 aa10.81□□□□□ -0.68
CSNK1E-214ENST00000498529 RAD54L2Q9Y4B4 1467 aa10.81□□□□□ -0.68
CSNK1E-214ENST00000498529 CUX1P39880 1505 aa10.8□□□□□ -0.68
CSNK1E-214ENST00000498529 FGD5Q6ZNL6 1462 aa10.8□□□□□ -0.68
CSNK1E-214ENST00000498529 MAGI1Q96QZ7 1491 aaPredicted RBP10.8□□□□□ -0.68
CSNK1E-214ENST00000498529 PPP4R3CPQ6ZMV5 832 aa10.79□□□□□ -0.68
CSNK1E-214ENST00000498529 SCAF1Q9H7N4 1312 aaKnown RBP10.77□□□□□ -0.69
CSNK1E-214ENST00000498529 SYNJ2O15056 1496 aa10.74□□□□□ -0.69
CSNK1E-214ENST00000498529 SHROOM2Q13796 1616 aa10.74□□□□□ -0.69
CSNK1E-214ENST00000498529 CYB5RLQ6IPT4 315 aa10.74□□□□□ -0.69
CSNK1E-214ENST00000498529 KIF13AQ9H1H9 1805 aa10.74□□□□□ -0.69
CSNK1E-214ENST00000498529 GRIN2BQ13224 1484 aa10.73□□□□□ -0.69
CSNK1E-214ENST00000498529 SOGA1O94964 1423 aa10.72□□□□□ -0.69
CSNK1E-214ENST00000498529 ERCC6L2Q5T890 1561 aa10.72□□□□□ -0.69
CSNK1E-214ENST00000498529 DCAF8L1A6NGE4 600 aa10.71□□□□□ -0.69
CSNK1E-214ENST00000498529 ADAMTS12P58397 1594 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms