RNA–Protein interactions for RNA: ENST00000370238.7

GCLM-201, Transcript of glutamate-cysteine ligase modifier subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCLM, Length 4,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCLM-201ENST00000370238 DCAF8L2P0C7V8 631 aa27.87■■■□□ 2.05
GCLM-201ENST00000370238 NISCHQ9Y2I1 1504 aa26.8■■□□□ 1.88
GCLM-201ENST00000370238 SUPT5HO00267 1087 aaKnown RBP26.66■■□□□ 1.86
GCLM-201ENST00000370238 SHROOM4Q9ULL8 1493 aa26.16■■□□□ 1.78
GCLM-201ENST00000370238 EHMT2Q96KQ7 1210 aa25.77■■□□□ 1.72
GCLM-201ENST00000370238 PELP1Q8IZL8 1130 aaKnown RBP25.3■■□□□ 1.64
GCLM-201ENST00000370238 PCGF6Q9BYE7 350 aa25.16■■□□□ 1.62
GCLM-201ENST00000370238 FAM9AQ8IZU1 332 aaPredicted RBP25.14■■□□□ 1.62
GCLM-201ENST00000370238 APLP2Q06481 763 aa24.93■■□□□ 1.58
GCLM-201ENST00000370238 TTBK1Q5TCY1 1321 aaPredicted RBP24.92■■□□□ 1.58
GCLM-201ENST00000370238 CENPBP07199 599 aaPredicted RBP24.63■■□□□ 1.53
GCLM-201ENST00000370238 TRIM41Q8WV44 630 aa24.57■■□□□ 1.52
GCLM-201ENST00000370238 ZEB1P37275 1124 aaPredicted RBP24.51■■□□□ 1.51
GCLM-201ENST00000370238 RANGAP1P46060 587 aaPredicted RBP24.5■■□□□ 1.51
GCLM-201ENST00000370238 CCER1Q8TC90 406 aaPredicted RBP24.46■■□□□ 1.51
GCLM-201ENST00000370238 ERICH6Q7L0X2 663 aa24.31■■□□□ 1.48
GCLM-201ENST00000370238 UBTFP17480 764 aaKnown RBP24.21■■□□□ 1.47
GCLM-201ENST00000370238 MYT1Q01538 1121 aa24.21■■□□□ 1.47
GCLM-201ENST00000370238 PPARGC1BQ86YN6 1023 aaKnown RBP24.17■■□□□ 1.46
GCLM-201ENST00000370238 ATP1B4Q9UN42 357 aaPredicted RBP24.1■■□□□ 1.45
GCLM-201ENST00000370238 YTHDC1Q96MU7 727 aaKnown RBP24.08■■□□□ 1.45
GCLM-201ENST00000370238 HRCP23327 699 aa23.97■■□□□ 1.43
GCLM-201ENST00000370238 TRIM26Q12899 539 aaPredicted RBP23.96■■□□□ 1.43
GCLM-201ENST00000370238 LOC105371045A0A1W2PR82 267 aa23.91■■□□□ 1.42
GCLM-201ENST00000370238 NEFLP07196 543 aa23.89■■□□□ 1.42
GCLM-201ENST00000370238 CHIC1Q5VXU3 224 aa23.85■■□□□ 1.41
GCLM-201ENST00000370238 ITGAEP38570 1179 aa23.54■■□□□ 1.36
GCLM-201ENST00000370238 HNRNPUL2Q1KMD3 747 aaKnown RBP23.49■■□□□ 1.35
GCLM-201ENST00000370238 ABCC9O60706 1549 aa23.38■■□□□ 1.33
GCLM-201ENST00000370238 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.37■■□□□ 1.33
GCLM-201ENST00000370238 PABPN1Q86U42 306 aaKnown RBP eCLIP23.27■■□□□ 1.32
GCLM-201ENST00000370238 MYT1LQ9UL68 1186 aa23.22■■□□□ 1.31
GCLM-201ENST00000370238 POLR3GLQ9BT43 218 aa23.21■■□□□ 1.31
GCLM-201ENST00000370238 DIEXFQ68CQ4 756 aaKnown RBP23.19■■□□□ 1.3
GCLM-201ENST00000370238 CNGB1Q14028 1251 aaPredicted RBP23.14■■□□□ 1.3
GCLM-201ENST00000370238 DAXXQ9UER7 740 aaPredicted RBP23.12■■□□□ 1.29
GCLM-201ENST00000370238 GTF3C3Q9Y5Q9 886 aa22.97■■□□□ 1.27
GCLM-201ENST00000370238 RTL5Q5HYW3 569 aaPredicted RBP22.85■■□□□ 1.25
GCLM-201ENST00000370238 FAM50AQ14320 339 aaKnown RBP22.84■■□□□ 1.25
GCLM-201ENST00000370238 NEUROD1Q13562 356 aa22.76■■□□□ 1.23
GCLM-201ENST00000370238 BCANQ96GW7 911 aa22.74■■□□□ 1.23
GCLM-201ENST00000370238 TRIM52Q96A61 297 aa22.65■■□□□ 1.22
GCLM-201ENST00000370238 FBLN2P98095 1184 aa22.63■■□□□ 1.21
GCLM-201ENST00000370238 ACIN1Q9UKV3 1341 aaKnown RBP22.62■■□□□ 1.21
GCLM-201ENST00000370238 ZNF316A6NFI3 1004 aaPredicted RBP22.62■■□□□ 1.21
GCLM-201ENST00000370238 CLSPNQ9HAW4 1339 aa22.57■■□□□ 1.2
GCLM-201ENST00000370238 SLC4A1APQ9BWU0 796 aaKnown RBP22.56■■□□□ 1.2
GCLM-201ENST00000370238 ANP32CO43423 234 aa22.49■■□□□ 1.19
GCLM-201ENST00000370238 CSRNP3Q8WYN3 585 aa22.47■■□□□ 1.19
GCLM-201ENST00000370238 CDK11AQ9UQ88 783 aaPredicted RBP22.47■■□□□ 1.19
GCLM-201ENST00000370238 ZNF326Q5BKZ1 582 aaKnown RBP22.46■■□□□ 1.19
GCLM-201ENST00000370238 P3H3Q8IVL6 736 aa22.36■■□□□ 1.17
GCLM-201ENST00000370238 SCRIBQ14160 1630 aa22.3■■□□□ 1.16
GCLM-201ENST00000370238 ARID3CA6NKF2 412 aa22.24■■□□□ 1.15
GCLM-201ENST00000370238 DCAF1Q9Y4B6 1507 aa22.17■■□□□ 1.14
GCLM-201ENST00000370238 ZCCHC6Q5VYS8 1495 aaKnown RBP22.12■■□□□ 1.13
GCLM-201ENST00000370238 ANP32AP39687 249 aaKnown RBP22.09■■□□□ 1.13
GCLM-201ENST00000370238 FKBP8Q14318 412 aa22.08■■□□□ 1.13
GCLM-201ENST00000370238 ZNF777Q9ULD5 760 aaPredicted RBP22.05■■□□□ 1.12
GCLM-201ENST00000370238 SCAF1Q9H7N4 1312 aaKnown RBP22.04■■□□□ 1.12
GCLM-201ENST00000370238 DDX10Q13206 875 aaKnown RBP22.03■■□□□ 1.12
GCLM-201ENST00000370238 NPM2Q86SE8 214 aaKnown RBP21.98■■□□□ 1.11
GCLM-201ENST00000370238 BCL11AQ9H165 835 aa21.96■■□□□ 1.11
GCLM-201ENST00000370238 CANXP27824 592 aaKnown RBP21.95■■□□□ 1.1
GCLM-201ENST00000370238 HNRNPUQ00839 825 aaKnown RBP eCLIP21.95■■□□□ 1.1
GCLM-201ENST00000370238 TONSLQ96HA7 1378 aa21.94■■□□□ 1.1
GCLM-201ENST00000370238 EIF5BO60841 1220 aaKnown RBP21.93■■□□□ 1.1
GCLM-201ENST00000370238 ZBTB47Q9UFB7 747 aaPredicted RBP21.89■■□□□ 1.09
GCLM-201ENST00000370238 MYO15BQ96JP2 1530 aa21.88■■□□□ 1.09
GCLM-201ENST00000370238 CCDC180Q9P1Z9 1646 aa21.88■■□□□ 1.09
GCLM-201ENST00000370238 NPM1P06748 294 aaKnown RBP eCLIP21.88■■□□□ 1.09
GCLM-201ENST00000370238 MIER1Q8N108 512 aa21.88■■□□□ 1.09
GCLM-201ENST00000370238 FAM9BQ8IZU0 186 aa21.87■■□□□ 1.09
GCLM-201ENST00000370238 ESF1Q9H501 851 aaKnown RBP21.83■■□□□ 1.08
GCLM-201ENST00000370238 CHIC2Q9UKJ5 165 aa21.8■■□□□ 1.08
GCLM-201ENST00000370238 SALL2Q9Y467 1007 aaPredicted RBP21.78■■□□□ 1.08
GCLM-201ENST00000370238 HIRIP3Q9BW71 556 aaPredicted RBP21.77■■□□□ 1.07
GCLM-201ENST00000370238 RB1CC1Q8TDY2 1594 aa21.74■■□□□ 1.07
GCLM-201ENST00000370238 SLC24A1O60721 1099 aa21.73■■□□□ 1.07
GCLM-201ENST00000370238 NBR1Q14596 966 aa21.72■■□□□ 1.07
GCLM-201ENST00000370238 NEFMP07197 916 aa21.71■■□□□ 1.07
GCLM-201ENST00000370238 CHMP7Q8WUX9 453 aaPredicted RBP21.71■■□□□ 1.07
GCLM-201ENST00000370238 CHGAP10645 457 aaKnown RBP21.68■■□□□ 1.06
GCLM-201ENST00000370238 CLIP1P30622 1438 aa21.66■■□□□ 1.06
GCLM-201ENST00000370238 STAG3Q9UJ98 1225 aa21.66■■□□□ 1.06
GCLM-201ENST00000370238 IRX6P78412 446 aaPredicted RBP21.64■■□□□ 1.06
GCLM-201ENST00000370238 CCDC136Q96JN2 1154 aa21.64■■□□□ 1.05
GCLM-201ENST00000370238 MRS2Q9HD23 443 aa21.64■■□□□ 1.05
GCLM-201ENST00000370238 TMC1Q8TDI8 760 aa21.63■■□□□ 1.05
GCLM-201ENST00000370238 PLPPR3Q6T4P5 718 aa21.61■■□□□ 1.05
GCLM-201ENST00000370238 ANP32BQ92688 251 aaKnown RBP21.58■■□□□ 1.04
GCLM-201ENST00000370238 RSF1Q96T23 1441 aaPredicted RBP21.55■■□□□ 1.04
GCLM-201ENST00000370238 KDM2AQ9Y2K7 1162 aa21.55■■□□□ 1.04
GCLM-201ENST00000370238 MTUS2Q5JR59 1369 aa21.55■■□□□ 1.04
GCLM-201ENST00000370238 TSPY4P0CV99 314 aa21.55■■□□□ 1.04
GCLM-201ENST00000370238 TSPY10P0CW01 314 aa21.55■■□□□ 1.04
GCLM-201ENST00000370238 CEP162Q5TB80 1403 aa21.55■■□□□ 1.04
GCLM-201ENST00000370238 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.54■■□□□ 1.04
GCLM-201ENST00000370238 HSP90AA1P07900 732 aaKnown RBP21.54■■□□□ 1.04
GCLM-201ENST00000370238 UPF2Q9HAU5 1272 aaKnown RBP21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms