RNA–Protein interactions for RNA: ENST00000316715.8

GPM6B-201, Transcript of glycoprotein M6B, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene GPM6B, Length 3,275 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPM6B-201ENST00000316715 NISCHQ9Y2I1 1504 aa18.86■□□□□ 0.61
GPM6B-201ENST00000316715 CCDC180Q9P1Z9 1646 aa16.43■□□□□ 0.22
GPM6B-201ENST00000316715 ZCCHC6Q5VYS8 1495 aaKnown RBP15.93■□□□□ 0.14
GPM6B-201ENST00000316715 DCAF1Q9Y4B6 1507 aa15.68■□□□□ 0.1
GPM6B-201ENST00000316715 MYO15BQ96JP2 1530 aa15.41■□□□□ 0.06
GPM6B-201ENST00000316715 SHROOM4Q9ULL8 1493 aa15.26■□□□□ 0.03
GPM6B-201ENST00000316715 NACADO15069 1562 aa15.14■□□□□ 0.01
GPM6B-201ENST00000316715 ABCC9O60706 1549 aa15.07■□□□□ 0
GPM6B-201ENST00000316715 SCRIBQ14160 1630 aa15□□□□□ -0.01
GPM6B-201ENST00000316715 DCAF8L2P0C7V8 631 aa14.99□□□□□ -0.01
GPM6B-201ENST00000316715 RB1CC1Q8TDY2 1594 aa14.91□□□□□ -0.02
GPM6B-201ENST00000316715 UNC13AQ9UPW8 1703 aa14.87□□□□□ -0.03
GPM6B-201ENST00000316715 SUPT5HO00267 1087 aaKnown RBP14.7□□□□□ -0.06
GPM6B-201ENST00000316715 RSF1Q96T23 1441 aaPredicted RBP14.68□□□□□ -0.06
GPM6B-201ENST00000316715 BICRAQ9NZM4 1560 aa14.64□□□□□ -0.07
GPM6B-201ENST00000316715 CECR2Q9BXF3 1484 aa14.61□□□□□ -0.07
GPM6B-201ENST00000316715 MROH2BQ7Z745 1585 aa14.58□□□□□ -0.08
GPM6B-201ENST00000316715 WIZO95785 1651 aa14.5□□□□□ -0.09
GPM6B-201ENST00000316715 BAZ1AQ9NRL2 1556 aaPredicted RBP14.49□□□□□ -0.09
GPM6B-201ENST00000316715 SMARCA4P51532 1647 aa14.47□□□□□ -0.09
GPM6B-201ENST00000316715 EIF4G1Q04637 1599 aaKnown RBP14.4□□□□□ -0.1
GPM6B-201ENST00000316715 PEG3Q9GZU2 1588 aa14.38□□□□□ -0.11
GPM6B-201ENST00000316715 CHIC1Q5VXU3 224 aa14.38□□□□□ -0.11
GPM6B-201ENST00000316715 TOP2AP11388 1531 aaKnown RBP14.33□□□□□ -0.12
GPM6B-201ENST00000316715 SMARCA2P51531 1590 aa14.24□□□□□ -0.13
GPM6B-201ENST00000316715 PABPN1Q86U42 306 aaKnown RBP eCLIP14.16□□□□□ -0.14
GPM6B-201ENST00000316715 CCDC88BA6NC98 1476 aa14.14□□□□□ -0.15
GPM6B-201ENST00000316715 ATAD2BQ9ULI0 1458 aa14.11□□□□□ -0.15
GPM6B-201ENST00000316715 HMGXB3Q12766 1538 aa14.02□□□□□ -0.17
GPM6B-201ENST00000316715 NCAPD3P42695 1498 aa13.97□□□□□ -0.17
GPM6B-201ENST00000316715 BAZ1BQ9UIG0 1483 aaKnown RBP13.96□□□□□ -0.17
GPM6B-201ENST00000316715 ABCC8Q09428 1581 aa13.92□□□□□ -0.18
GPM6B-201ENST00000316715 PRDM2Q13029 1718 aa13.84□□□□□ -0.19
GPM6B-201ENST00000316715 TRIM41Q8WV44 630 aa13.82□□□□□ -0.2
GPM6B-201ENST00000316715 SYNJ1O43426 1573 aa13.81□□□□□ -0.2
GPM6B-201ENST00000316715 CC2D2AQ9P2K1 1620 aa13.79□□□□□ -0.2
GPM6B-201ENST00000316715 LOC105371045A0A1W2PR82 267 aa13.77□□□□□ -0.2
GPM6B-201ENST00000316715 BIVM-ERCC5R4GMW8 1640 aa13.77□□□□□ -0.2
GPM6B-201ENST00000316715 TOP2BQ02880 1626 aa13.73□□□□□ -0.21
GPM6B-201ENST00000316715 CFTRP13569 1480 aa13.73□□□□□ -0.21
GPM6B-201ENST00000316715 WRNQ14191 1432 aaPredicted RBP eCLIP13.71□□□□□ -0.21
GPM6B-201ENST00000316715 SOGA1O94964 1423 aa13.67□□□□□ -0.22
GPM6B-201ENST00000316715 RUSC2Q8N2Y8 1516 aa13.65□□□□□ -0.22
GPM6B-201ENST00000316715 EEA1Q15075 1411 aa13.63□□□□□ -0.23
GPM6B-201ENST00000316715 CUX1P39880 1505 aa13.63□□□□□ -0.23
GPM6B-201ENST00000316715 KIF21BO75037 1637 aa13.6□□□□□ -0.23
GPM6B-201ENST00000316715 CADPSQ9ULU8 1353 aa13.53□□□□□ -0.24
GPM6B-201ENST00000316715 FAM9AQ8IZU1 332 aaPredicted RBP13.52□□□□□ -0.25
GPM6B-201ENST00000316715 TNIKQ9UKE5 1360 aa13.48□□□□□ -0.25
GPM6B-201ENST00000316715 LAMC3Q9Y6N6 1575 aa13.46□□□□□ -0.26
GPM6B-201ENST00000316715 GOLGA3Q08378 1498 aa13.45□□□□□ -0.26
GPM6B-201ENST00000316715 CSRNP3Q8WYN3 585 aa13.44□□□□□ -0.26
GPM6B-201ENST00000316715 CEP164Q9UPV0 1460 aa13.44□□□□□ -0.26
GPM6B-201ENST00000316715 ERICH3Q5RHP9 1530 aa13.44□□□□□ -0.26
GPM6B-201ENST00000316715 PRXQ9BXM0 1461 aa13.43□□□□□ -0.26
GPM6B-201ENST00000316715 WDR97A6NE52 1622 aa13.41□□□□□ -0.26
GPM6B-201ENST00000316715 CEP162Q5TB80 1403 aa13.41□□□□□ -0.26
GPM6B-201ENST00000316715 NESP48681 1621 aa13.4□□□□□ -0.26
GPM6B-201ENST00000316715 DNMBPQ6XZF7 1577 aa13.4□□□□□ -0.26
GPM6B-201ENST00000316715 FANCD2Q9BXW9 1451 aa13.4□□□□□ -0.26
GPM6B-201ENST00000316715 RAPGEF2Q9Y4G8 1499 aa13.39□□□□□ -0.27
GPM6B-201ENST00000316715 FGD5Q6ZNL6 1462 aa13.35□□□□□ -0.27
GPM6B-201ENST00000316715 KIF21AQ7Z4S6 1674 aa13.35□□□□□ -0.27
GPM6B-201ENST00000316715 TOPBP1Q92547 1522 aa13.34□□□□□ -0.27
GPM6B-201ENST00000316715 DNAJC5BQ9UF47 199 aa13.33□□□□□ -0.28
GPM6B-201ENST00000316715 URB2Q14146 1524 aaKnown RBP13.32□□□□□ -0.28
GPM6B-201ENST00000316715 ABCA10Q8WWZ4 1543 aa13.3□□□□□ -0.28
GPM6B-201ENST00000316715 KIF27Q86VH2 1401 aa13.3□□□□□ -0.28
GPM6B-201ENST00000316715 POLA1P09884 1462 aaPredicted RBP13.29□□□□□ -0.28
GPM6B-201ENST00000316715 TRIM26Q12899 539 aaPredicted RBP13.28□□□□□ -0.28
GPM6B-201ENST00000316715 PCGF6Q9BYE7 350 aa13.28□□□□□ -0.28
GPM6B-201ENST00000316715 ABCA5Q8WWZ7 1642 aa13.26□□□□□ -0.29
GPM6B-201ENST00000316715 IGF1RP08069 1367 aa13.25□□□□□ -0.29
GPM6B-201ENST00000316715 EHMT2Q96KQ7 1210 aa13.25□□□□□ -0.29
GPM6B-201ENST00000316715 TARBP1Q13395 1621 aaKnown RBP13.24□□□□□ -0.29
GPM6B-201ENST00000316715 CUX2O14529 1486 aa13.23□□□□□ -0.29
GPM6B-201ENST00000316715 ARAP1Q96P48 1450 aa13.21□□□□□ -0.29
GPM6B-201ENST00000316715 RAD54L2Q9Y4B4 1467 aa13.21□□□□□ -0.3
GPM6B-201ENST00000316715 CUL7Q14999 1698 aa13.2□□□□□ -0.3
GPM6B-201ENST00000316715 CLIP1P30622 1438 aa13.2□□□□□ -0.3
GPM6B-201ENST00000316715 HRCP23327 699 aa13.2□□□□□ -0.3
GPM6B-201ENST00000316715 PDS5BQ9NTI5 1447 aa13.19□□□□□ -0.3
GPM6B-201ENST00000316715 VPS8Q8N3P4 1428 aa13.18□□□□□ -0.3
GPM6B-201ENST00000316715 CTTNBP2Q8WZ74 1663 aa13.14□□□□□ -0.31
GPM6B-201ENST00000316715 ARHGAP35Q9NRY4 1499 aa13.14□□□□□ -0.31
GPM6B-201ENST00000316715 WDR62O43379 1518 aa13.13□□□□□ -0.31
GPM6B-201ENST00000316715 UBTFP17480 764 aaKnown RBP13.13□□□□□ -0.31
GPM6B-201ENST00000316715 PBRM1Q86U86 1689 aa13.12□□□□□ -0.31
GPM6B-201ENST00000316715 THOC2Q8NI27 1593 aaKnown RBP13.1□□□□□ -0.31
GPM6B-201ENST00000316715 MRC2Q9UBG0 1479 aa13.09□□□□□ -0.31
GPM6B-201ENST00000316715 CARMIL1Q5VZK9 1371 aa13.09□□□□□ -0.31
GPM6B-201ENST00000316715 SAMD9Q5K651 1589 aa13.04□□□□□ -0.32
GPM6B-201ENST00000316715 GAPVD1Q14C86 1478 aa13.03□□□□□ -0.32
GPM6B-201ENST00000316715 MAP3K1Q13233 1512 aa13.02□□□□□ -0.32
GPM6B-201ENST00000316715 ADAMTS12P58397 1594 aa13.02□□□□□ -0.33
GPM6B-201ENST00000316715 CFAP43Q8NDM7 1665 aa13.02□□□□□ -0.33
GPM6B-201ENST00000316715 EFCAB5A4FU69 1503 aa13.01□□□□□ -0.33
GPM6B-201ENST00000316715 PPARGC1BQ86YN6 1023 aaKnown RBP13□□□□□ -0.33
GPM6B-201ENST00000316715 LRRIQ1Q96JM4 1722 aa12.99□□□□□ -0.33
GPM6B-201ENST00000316715 IFT140Q96RY7 1462 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms