RNA–Protein interactions for RNA: ENST00000415461.2

CTTN-205, Transcript of cortactin, humanhuman

TSL 3

Gene CTTN, Length 1,021 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-205ENST00000415461 NISCHQ9Y2I1 1504 aa49.76■■■■■ 5.56
CTTN-205ENST00000415461 CCDC180Q9P1Z9 1646 aa44.39■■■■■ 4.7
CTTN-205ENST00000415461 ABCC9O60706 1549 aa43.96■■■■■ 4.63
CTTN-205ENST00000415461 RB1CC1Q8TDY2 1594 aa42.01■■■■■ 4.32
CTTN-205ENST00000415461 NACADO15069 1562 aa41.85■■■■■ 4.29
CTTN-205ENST00000415461 DCAF8L2P0C7V8 631 aa41.76■■■■■ 4.28
CTTN-205ENST00000415461 MYO15BQ96JP2 1530 aa41.44■■■■■ 4.23
CTTN-205ENST00000415461 ZCCHC6Q5VYS8 1495 aaKnown RBP41.39■■■■■ 4.22
CTTN-205ENST00000415461 DCAF1Q9Y4B6 1507 aa41.11■■■■■ 4.17
CTTN-205ENST00000415461 UNC13AQ9UPW8 1703 aa41.03■■■■■ 4.16
CTTN-205ENST00000415461 PABPN1Q86U42 306 aaKnown RBP eCLIP41.01■■■■■ 4.16
CTTN-205ENST00000415461 BICRAQ9NZM4 1560 aa40.81■■■■■ 4.12
CTTN-205ENST00000415461 DNAJC5BQ9UF47 199 aa40.76■■■■■ 4.12
CTTN-205ENST00000415461 SCRIBQ14160 1630 aa40.56■■■■■ 4.08
CTTN-205ENST00000415461 SHROOM4Q9ULL8 1493 aa40.29■■■■■ 4.04
CTTN-205ENST00000415461 EIF4G1Q04637 1599 aaKnown RBP39.76■■■■□ 3.96
CTTN-205ENST00000415461 CC2D2AQ9P2K1 1620 aa39.71■■■■□ 3.95
CTTN-205ENST00000415461 CECR2Q9BXF3 1484 aa39.54■■■■□ 3.92
CTTN-205ENST00000415461 SMARCA4P51532 1647 aa38.71■■■■□ 3.79
CTTN-205ENST00000415461 NCAPD3P42695 1498 aa38.65■■■■□ 3.78
CTTN-205ENST00000415461 ATAD2BQ9ULI0 1458 aa38.63■■■■□ 3.77
CTTN-205ENST00000415461 BAZ1AQ9NRL2 1556 aaPredicted RBP38.58■■■■□ 3.77
CTTN-205ENST00000415461 SMARCA2P51531 1590 aa38.52■■■■□ 3.76
CTTN-205ENST00000415461 HMGXB3Q12766 1538 aa38.43■■■■□ 3.74
CTTN-205ENST00000415461 MROH2BQ7Z745 1585 aa38.37■■■■□ 3.73
CTTN-205ENST00000415461 PEG3Q9GZU2 1588 aa38.32■■■■□ 3.73
CTTN-205ENST00000415461 BAZ1BQ9UIG0 1483 aaKnown RBP38.28■■■■□ 3.72
CTTN-205ENST00000415461 WIZO95785 1651 aa37.92■■■■□ 3.66
CTTN-205ENST00000415461 ERCC6Q03468 1493 aa37.91■■■■□ 3.66
CTTN-205ENST00000415461 NESP48681 1621 aa37.91■■■■□ 3.66
CTTN-205ENST00000415461 RSF1Q96T23 1441 aaPredicted RBP37.76■■■■□ 3.63
CTTN-205ENST00000415461 LAMC3Q9Y6N6 1575 aa37.68■■■■□ 3.62
CTTN-205ENST00000415461 CUX2O14529 1486 aa37.64■■■■□ 3.62
CTTN-205ENST00000415461 CADPSQ9ULU8 1353 aa37.51■■■■□ 3.59
CTTN-205ENST00000415461 TOP2AP11388 1531 aaKnown RBP37.49■■■■□ 3.59
CTTN-205ENST00000415461 PDS5BQ9NTI5 1447 aa37.46■■■■□ 3.59
CTTN-205ENST00000415461 THOC2Q8NI27 1593 aaKnown RBP37.42■■■■□ 3.58
CTTN-205ENST00000415461 KIF21AQ7Z4S6 1674 aa37.4■■■■□ 3.58
CTTN-205ENST00000415461 CFTRP13569 1480 aa37.2■■■■□ 3.54
CTTN-205ENST00000415461 MRC2Q9UBG0 1479 aa37.13■■■■□ 3.54
CTTN-205ENST00000415461 FANCD2Q9BXW9 1451 aa37.09■■■■□ 3.53
CTTN-205ENST00000415461 CEP164Q9UPV0 1460 aa37.08■■■■□ 3.53
CTTN-205ENST00000415461 CCDC88BA6NC98 1476 aa37.06■■■■□ 3.52
CTTN-205ENST00000415461 WDR62O43379 1518 aa37.03■■■■□ 3.52
CTTN-205ENST00000415461 DNAJC5Q9H3Z4 198 aa37■■■■□ 3.51
CTTN-205ENST00000415461 PRDM2Q13029 1718 aa36.79■■■■□ 3.48
CTTN-205ENST00000415461 URB2Q14146 1524 aaKnown RBP36.77■■■■□ 3.48
CTTN-205ENST00000415461 SUPT5HO00267 1087 aaKnown RBP36.46■■■■□ 3.43
CTTN-205ENST00000415461 TOPBP1Q92547 1522 aa36.45■■■■□ 3.43
CTTN-205ENST00000415461 DNMBPQ6XZF7 1577 aa36.36■■■■□ 3.41
CTTN-205ENST00000415461 ABCC8Q09428 1581 aa36.34■■■■□ 3.41
CTTN-205ENST00000415461 IFT140Q96RY7 1462 aa36.31■■■■□ 3.4
CTTN-205ENST00000415461 ZNF608Q9ULD9 1512 aaPredicted RBP36.24■■■■□ 3.39
CTTN-205ENST00000415461 POLA1P09884 1462 aaPredicted RBP36.12■■■■□ 3.37
CTTN-205ENST00000415461 TARBP1Q13395 1621 aaKnown RBP36.07■■■■□ 3.36
CTTN-205ENST00000415461 EIF4G3O43432 1585 aaKnown RBP36.06■■■■□ 3.36
CTTN-205ENST00000415461 CUX1P39880 1505 aa36.03■■■■□ 3.36
CTTN-205ENST00000415461 RAD54L2Q9Y4B4 1467 aa35.99■■■■□ 3.35
CTTN-205ENST00000415461 FGD5Q6ZNL6 1462 aa35.98■■■■□ 3.35
CTTN-205ENST00000415461 OSCARQ8IYS5 282 aa35.97■■■■□ 3.35
CTTN-205ENST00000415461 AQRO60306 1485 aaKnown RBP eCLIP35.97■■■■□ 3.353e-9■■■■■ 26.9
CTTN-205ENST00000415461 SOGA1O94964 1423 aa35.93■■■■□ 3.34
CTTN-205ENST00000415461 TDRD9Q8NDG6 1382 aaKnown RBP35.82■■■■□ 3.32
CTTN-205ENST00000415461 WDR97A6NE52 1622 aa35.72■■■■□ 3.31
CTTN-205ENST00000415461 TRIM41Q8WV44 630 aa35.65■■■■□ 3.3
CTTN-205ENST00000415461 CHD1O14646 1710 aa35.64■■■■□ 3.3
CTTN-205ENST00000415461 SNAPC4Q5SXM2 1469 aa35.63■■■■□ 3.29
CTTN-205ENST00000415461 WRNQ14191 1432 aaPredicted RBP eCLIP35.61■■■■□ 3.29
CTTN-205ENST00000415461 FBLN2P98095 1184 aa35.6■■■■□ 3.29
CTTN-205ENST00000415461 ABCA10Q8WWZ4 1543 aa35.58■■■■□ 3.29
CTTN-205ENST00000415461 SYNJ1O43426 1573 aa35.57■■■■□ 3.28
CTTN-205ENST00000415461 GRIN2BQ13224 1484 aa35.57■■■■□ 3.28
CTTN-205ENST00000415461 TOP2BQ02880 1626 aa35.56■■■■□ 3.28
CTTN-205ENST00000415461 BIVM-ERCC5R4GMW8 1640 aa35.54■■■■□ 3.28
CTTN-205ENST00000415461 MAGI1Q96QZ7 1491 aaPredicted RBP35.53■■■■□ 3.28
CTTN-205ENST00000415461 GAPVD1Q14C86 1478 aa35.52■■■■□ 3.28
CTTN-205ENST00000415461 RIMBP3CA6NJZ7 1639 aa35.49■■■■□ 3.27
CTTN-205ENST00000415461 RIMBP3BA6NNM3 1639 aa35.49■■■■□ 3.27
CTTN-205ENST00000415461 RIMBP3Q9UFD9 1639 aa35.49■■■■□ 3.27
CTTN-205ENST00000415461 ABCA5Q8WWZ7 1642 aa35.48■■■■□ 3.27
CTTN-205ENST00000415461 ARHGEF11O15085 1522 aa35.46■■■■□ 3.27
CTTN-205ENST00000415461 PBRM1Q86U86 1689 aa35.45■■■■□ 3.27
CTTN-205ENST00000415461 CHMP7Q8WUX9 453 aaPredicted RBP35.41■■■■□ 3.26
CTTN-205ENST00000415461 SYNJ2O15056 1496 aa35.41■■■■□ 3.26
CTTN-205ENST00000415461 CLASP1Q7Z460 1538 aa35.3■■■■□ 3.24
CTTN-205ENST00000415461 ADAMTS12P58397 1594 aa35.2■■■■□ 3.23
CTTN-205ENST00000415461 ARAP1Q96P48 1450 aa35.16■■■■□ 3.22
CTTN-205ENST00000415461 GRIN2AQ12879 1464 aa35.14■■■■□ 3.22
CTTN-205ENST00000415461 ERICH3Q5RHP9 1530 aa35.13■■■■□ 3.21
CTTN-205ENST00000415461 CYB5RLQ6IPT4 315 aa35.12■■■■□ 3.21
CTTN-205ENST00000415461 FHAD1B1AJZ9 1412 aa35.09■■■■□ 3.21
CTTN-205ENST00000415461 NUP160Q12769 1436 aa35■■■■□ 3.19
CTTN-205ENST00000415461 CEP170Q5SW79 1584 aa35■■■■□ 3.19
CTTN-205ENST00000415461 KIF27Q86VH2 1401 aa34.89■■■■□ 3.18
CTTN-205ENST00000415461 ERCC6L2Q5T890 1561 aa34.81■■■■□ 3.16
CTTN-205ENST00000415461 IGF1RP08069 1367 aa34.8■■■■□ 3.16
CTTN-205ENST00000415461 SHROOM2Q13796 1616 aa34.76■■■■□ 3.15
CTTN-205ENST00000415461 CUL7Q14999 1698 aa34.71■■■■□ 3.15
CTTN-205ENST00000415461 RUSC2Q8N2Y8 1516 aa34.69■■■■□ 3.14
CTTN-205ENST00000415461 PRG4Q92954 1404 aaPredicted RBP34.61■■■■□ 3.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms