RNA–Protein interactions for RNA: ENST00000450635.1

MTHFD1L-208, Transcript of methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1 like, humanhuman

TSL 5

Gene MTHFD1L, Length 427 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1L-208ENST00000450635 AEBP2Q6ZN18 517 aaPredicted RBP22.83■■□□□ 1.25
MTHFD1L-208ENST00000450635 CHIC1Q5VXU3 224 aa22.2■■□□□ 1.14
MTHFD1L-208ENST00000450635 PHF23Q9BUL5 403 aaPredicted RBP19.54■□□□□ 0.72
MTHFD1L-208ENST00000450635 SENP3Q9H4L4 574 aaPredicted RBP19.35■□□□□ 0.69
MTHFD1L-208ENST00000450635 NISCHQ9Y2I1 1504 aa18.96■□□□□ 0.63
MTHFD1L-208ENST00000450635 FOXD1Q16676 465 aa17.99■□□□□ 0.47
MTHFD1L-208ENST00000450635 PLPPR3Q6T4P5 718 aa17.99■□□□□ 0.47
MTHFD1L-208ENST00000450635 ADRA2BP18089 450 aa17.28■□□□□ 0.36
MTHFD1L-208ENST00000450635 PPP6R1Q9UPN7 881 aa17.28■□□□□ 0.36
MTHFD1L-208ENST00000450635 CCDC180Q9P1Z9 1646 aa17.08■□□□□ 0.32
MTHFD1L-208ENST00000450635 ABCC9O60706 1549 aa17.03■□□□□ 0.32
MTHFD1L-208ENST00000450635 PIAS4Q8N2W9 510 aaPredicted RBP16.98■□□□□ 0.31
MTHFD1L-208ENST00000450635 MSH5O43196 834 aa16.57■□□□□ 0.24
MTHFD1L-208ENST00000450635 RB1CC1Q8TDY2 1594 aa16.21■□□□□ 0.19
MTHFD1L-208ENST00000450635 NACADO15069 1562 aa16.08■□□□□ 0.16
MTHFD1L-208ENST00000450635 DCAF8L2P0C7V8 631 aa16.02■□□□□ 0.16
MTHFD1L-208ENST00000450635 UNC13AQ9UPW8 1703 aa15.99■□□□□ 0.15
MTHFD1L-208ENST00000450635 DNAJC5BQ9UF47 199 aa15.9■□□□□ 0.14
MTHFD1L-208ENST00000450635 PPP4R3CPQ6ZMV5 832 aa15.87■□□□□ 0.13
MTHFD1L-208ENST00000450635 PABPN1Q86U42 306 aaKnown RBP eCLIP15.82■□□□□ 0.12
MTHFD1L-208ENST00000450635 MYO15BQ96JP2 1530 aa15.81■□□□□ 0.12
MTHFD1L-208ENST00000450635 BICRAQ9NZM4 1560 aa15.75■□□□□ 0.11
MTHFD1L-208ENST00000450635 SCAF1Q9H7N4 1312 aaKnown RBP15.73■□□□□ 0.11
MTHFD1L-208ENST00000450635 ZCCHC6Q5VYS8 1495 aaKnown RBP15.72■□□□□ 0.11
MTHFD1L-208ENST00000450635 MAPK8IP2Q13387 824 aaPredicted RBP15.71■□□□□ 0.11
MTHFD1L-208ENST00000450635 DCAF1Q9Y4B6 1507 aa15.63■□□□□ 0.09
MTHFD1L-208ENST00000450635 SCRIBQ14160 1630 aa15.58■□□□□ 0.09
MTHFD1L-208ENST00000450635 KCNA4P22459 653 aa15.47■□□□□ 0.07
MTHFD1L-208ENST00000450635 SHROOM4Q9ULL8 1493 aa15.46■□□□□ 0.07
MTHFD1L-208ENST00000450635 DMRT2Q9Y5R5 561 aa15.43■□□□□ 0.06
MTHFD1L-208ENST00000450635 NCBP3Q53F19 620 aaKnown RBP15.41■□□□□ 0.06
MTHFD1L-208ENST00000450635 CNKSR2Q8WXI2 1034 aa15.41■□□□□ 0.06
MTHFD1L-208ENST00000450635 CC2D2AQ9P2K1 1620 aa15.4■□□□□ 0.06
MTHFD1L-208ENST00000450635 EIF4G1Q04637 1599 aaKnown RBP15.36■□□□□ 0.05
MTHFD1L-208ENST00000450635 CECR2Q9BXF3 1484 aa15.31■□□□□ 0.04
MTHFD1L-208ENST00000450635 POTEDQ86YR6 584 aa15.25■□□□□ 0.03
MTHFD1L-208ENST00000450635 NPM3O75607 178 aaKnown RBP15.21■□□□□ 0.03
MTHFD1L-208ENST00000450635 RNF216Q9NWF9 866 aaPredicted RBP15.11■□□□□ 0.01
MTHFD1L-208ENST00000450635 HOXD11P31277 338 aaPredicted RBP15.06■□□□□ 0
MTHFD1L-208ENST00000450635 DCAF8L1A6NGE4 600 aa14.88□□□□□ -0.03
MTHFD1L-208ENST00000450635 SMARCA4P51532 1647 aa14.84□□□□□ -0.03
MTHFD1L-208ENST00000450635 NCAPD3P42695 1498 aa14.8□□□□□ -0.04
MTHFD1L-208ENST00000450635 ATAD2BQ9ULI0 1458 aa14.78□□□□□ -0.04
MTHFD1L-208ENST00000450635 SMARCA2P51531 1590 aa14.77□□□□□ -0.04
MTHFD1L-208ENST00000450635 HMGXB3Q12766 1538 aa14.74□□□□□ -0.05
MTHFD1L-208ENST00000450635 BAZ1AQ9NRL2 1556 aaPredicted RBP14.73□□□□□ -0.05
MTHFD1L-208ENST00000450635 SLC4A1APQ9BWU0 796 aaKnown RBP14.71□□□□□ -0.05
MTHFD1L-208ENST00000450635 ERCC6Q03468 1493 aa14.7□□□□□ -0.06
MTHFD1L-208ENST00000450635 BAZ1BQ9UIG0 1483 aaKnown RBP14.68□□□□□ -0.06
MTHFD1L-208ENST00000450635 PEG3Q9GZU2 1588 aa14.65□□□□□ -0.06
MTHFD1L-208ENST00000450635 NESP48681 1621 aa14.64□□□□□ -0.07
MTHFD1L-208ENST00000450635 MROH2BQ7Z745 1585 aa14.64□□□□□ -0.07
MTHFD1L-208ENST00000450635 CUX2O14529 1486 aa14.63□□□□□ -0.07
MTHFD1L-208ENST00000450635 DNAJC5Q9H3Z4 198 aa14.56□□□□□ -0.08
MTHFD1L-208ENST00000450635 KIF21AQ7Z4S6 1674 aa14.54□□□□□ -0.08
MTHFD1L-208ENST00000450635 LAMC3Q9Y6N6 1575 aa14.53□□□□□ -0.08
MTHFD1L-208ENST00000450635 WIZO95785 1651 aa14.52□□□□□ -0.09
MTHFD1L-208ENST00000450635 THOC2Q8NI27 1593 aaKnown RBP14.51□□□□□ -0.09
MTHFD1L-208ENST00000450635 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.43□□□□□ -0.1
MTHFD1L-208ENST00000450635 PDS5BQ9NTI5 1447 aa14.4□□□□□ -0.1
MTHFD1L-208ENST00000450635 SLC4A2P04920 1241 aa14.38□□□□□ -0.11
MTHFD1L-208ENST00000450635 CADPSQ9ULU8 1353 aa14.35□□□□□ -0.11
MTHFD1L-208ENST00000450635 RSF1Q96T23 1441 aaPredicted RBP14.3□□□□□ -0.12
MTHFD1L-208ENST00000450635 MRC2Q9UBG0 1479 aa14.3□□□□□ -0.12
MTHFD1L-208ENST00000450635 EHMT2Q96KQ7 1210 aa14.29□□□□□ -0.12
MTHFD1L-208ENST00000450635 WDR62O43379 1518 aa14.28□□□□□ -0.12
MTHFD1L-208ENST00000450635 TOP2AP11388 1531 aaKnown RBP14.28□□□□□ -0.12
MTHFD1L-208ENST00000450635 CEP164Q9UPV0 1460 aa14.26□□□□□ -0.13
MTHFD1L-208ENST00000450635 PRDM2Q13029 1718 aa14.25□□□□□ -0.13
MTHFD1L-208ENST00000450635 ZBTB22O15209 634 aa14.23□□□□□ -0.13
MTHFD1L-208ENST00000450635 FANCD2Q9BXW9 1451 aa14.23□□□□□ -0.13
MTHFD1L-208ENST00000450635 FOXD4L1Q9NU39 408 aa14.22□□□□□ -0.13
MTHFD1L-208ENST00000450635 CFTRP13569 1480 aa14.21□□□□□ -0.13
MTHFD1L-208ENST00000450635 RNF39Q9H2S5 420 aa14.21□□□□□ -0.13
MTHFD1L-208ENST00000450635 U3KPZ7 1027 aaPredicted RBP14.18□□□□□ -0.14
MTHFD1L-208ENST00000450635 URB2Q14146 1524 aaKnown RBP14.13□□□□□ -0.15
MTHFD1L-208ENST00000450635 CCDC88BA6NC98 1476 aa14.1□□□□□ -0.15
MTHFD1L-208ENST00000450635 CSRNP3Q8WYN3 585 aa14.07□□□□□ -0.16
MTHFD1L-208ENST00000450635 MYCNP04198 464 aaPredicted RBP14.04□□□□□ -0.16
MTHFD1L-208ENST00000450635 C1QBPQ07021 282 aaKnown RBP14.01□□□□□ -0.17
MTHFD1L-208ENST00000450635 TRIM41Q8WV44 630 aa14□□□□□ -0.17
MTHFD1L-208ENST00000450635 TOPBP1Q92547 1522 aa13.98□□□□□ -0.17
MTHFD1L-208ENST00000450635 ZNF608Q9ULD9 1512 aaPredicted RBP13.95□□□□□ -0.18
MTHFD1L-208ENST00000450635 DNMBPQ6XZF7 1577 aa13.95□□□□□ -0.18
MTHFD1L-208ENST00000450635 IFT140Q96RY7 1462 aa13.94□□□□□ -0.18
MTHFD1L-208ENST00000450635 CACNB1Q02641 598 aaPredicted RBP13.94□□□□□ -0.18
MTHFD1L-208ENST00000450635 OSCARQ8IYS5 282 aa13.93□□□□□ -0.18
MTHFD1L-208ENST00000450635 EIF4G3O43432 1585 aaKnown RBP13.92□□□□□ -0.18
MTHFD1L-208ENST00000450635 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.92□□□□□ -0.18
MTHFD1L-208ENST00000450635 HNRNPUL2Q1KMD3 747 aaKnown RBP13.92□□□□□ -0.18
MTHFD1L-208ENST00000450635 ABCC8Q09428 1581 aa13.91□□□□□ -0.18
MTHFD1L-208ENST00000450635 SAMD1Q6SPF0 538 aaPredicted RBP13.89□□□□□ -0.19
MTHFD1L-208ENST00000450635 CHD1O14646 1710 aa13.88□□□□□ -0.19
MTHFD1L-208ENST00000450635 TARBP1Q13395 1621 aaKnown RBP13.88□□□□□ -0.19
MTHFD1L-208ENST00000450635 RIMBP3CA6NJZ7 1639 aa13.86□□□□□ -0.19
MTHFD1L-208ENST00000450635 RIMBP3BA6NNM3 1639 aa13.86□□□□□ -0.19
MTHFD1L-208ENST00000450635 RIMBP3Q9UFD9 1639 aa13.86□□□□□ -0.19
MTHFD1L-208ENST00000450635 POLA1P09884 1462 aaPredicted RBP13.83□□□□□ -0.2
MTHFD1L-208ENST00000450635 SPINK5Q9NQ38 1064 aaPredicted RBP13.83□□□□□ -0.2
MTHFD1L-208ENST00000450635 AQRO60306 1485 aaKnown RBP eCLIP13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms