RNA–Protein interactions for RNA: ENST00000399562.8

C22orf39-202, Transcript of chromosome 22 open reading frame 39, humanhuman

TSL 1 (best) BASIC

Gene C22orf39, Length 3,350 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C22orf39-202ENST00000399562 NISCHQ9Y2I1 1504 aa22.48■■□□□ 1.19
C22orf39-202ENST00000399562 PELP1Q8IZL8 1130 aaKnown RBP21.49■■□□□ 1.03
C22orf39-202ENST00000399562 MYT1Q01538 1121 aa21.06■□□□□ 0.96
C22orf39-202ENST00000399562 PRKCSHP14314 528 aaPredicted RBP20.38■□□□□ 0.85
C22orf39-202ENST00000399562 DCAF8L2P0C7V8 631 aa20.23■□□□□ 0.83
C22orf39-202ENST00000399562 TTBK1Q5TCY1 1321 aaPredicted RBP20.03■□□□□ 0.8
C22orf39-202ENST00000399562 PPARGC1BQ86YN6 1023 aaKnown RBP19.95■□□□□ 0.78
C22orf39-202ENST00000399562 HRCP23327 699 aa19.93■□□□□ 0.78
C22orf39-202ENST00000399562 BCL11AQ9H165 835 aa19.91■□□□□ 0.78
C22orf39-202ENST00000399562 SCAF1Q9H7N4 1312 aaKnown RBP19.89■□□□□ 0.77
C22orf39-202ENST00000399562 ERICH6Q7L0X2 663 aa19.69■□□□□ 0.74
C22orf39-202ENST00000399562 FAM9AQ8IZU1 332 aaPredicted RBP19.67■□□□□ 0.74
C22orf39-202ENST00000399562 SLC24A1O60721 1099 aa19.62■□□□□ 0.73
C22orf39-202ENST00000399562 SHROOM4Q9ULL8 1493 aa19.62■□□□□ 0.73
C22orf39-202ENST00000399562 APLP2Q06481 763 aa19.33■□□□□ 0.69
C22orf39-202ENST00000399562 PCGF6Q9BYE7 350 aa19.25■□□□□ 0.67
C22orf39-202ENST00000399562 SUPT5HO00267 1087 aaKnown RBP19.24■□□□□ 0.67
C22orf39-202ENST00000399562 CENPBP07199 599 aaPredicted RBP19.21■□□□□ 0.67
C22orf39-202ENST00000399562 GTF3C3Q9Y5Q9 886 aa19.06■□□□□ 0.64
C22orf39-202ENST00000399562 CCDC180Q9P1Z9 1646 aa18.93■□□□□ 0.62
C22orf39-202ENST00000399562 NEUROD1Q13562 356 aa18.86■□□□□ 0.61
C22orf39-202ENST00000399562 ACIN1Q9UKV3 1341 aaKnown RBP18.86■□□□□ 0.61
C22orf39-202ENST00000399562 ZCCHC6Q5VYS8 1495 aaKnown RBP18.82■□□□□ 0.6
C22orf39-202ENST00000399562 EIF5BO60841 1220 aaKnown RBP18.79■□□□□ 0.6
C22orf39-202ENST00000399562 ABCC9O60706 1549 aa18.75■□□□□ 0.59
C22orf39-202ENST00000399562 CSRNP3Q8WYN3 585 aa18.72■□□□□ 0.59
C22orf39-202ENST00000399562 PLEKHG5O94827 1062 aa18.68■□□□□ 0.58
C22orf39-202ENST00000399562 ANP32EQ9BTT0 268 aa18.68■□□□□ 0.58
C22orf39-202ENST00000399562 ANO8Q9HCE9 1232 aaPredicted RBP18.64■□□□□ 0.58
C22orf39-202ENST00000399562 DAXXQ9UER7 740 aaPredicted RBP18.56■□□□□ 0.56
C22orf39-202ENST00000399562 CCDC136Q96JN2 1154 aa18.44■□□□□ 0.54
C22orf39-202ENST00000399562 CHIC1Q5VXU3 224 aa18.34■□□□□ 0.53
C22orf39-202ENST00000399562 YTHDC1Q96MU7 727 aaKnown RBP18.32■□□□□ 0.52
C22orf39-202ENST00000399562 MYO15BQ96JP2 1530 aa18.29■□□□□ 0.52
C22orf39-202ENST00000399562 PODXL2Q9NZ53 605 aa18.25■□□□□ 0.51
C22orf39-202ENST00000399562 ZEB1P37275 1124 aaPredicted RBP18.22■□□□□ 0.51
C22orf39-202ENST00000399562 PABPN1Q86U42 306 aaKnown RBP eCLIP18.21■□□□□ 0.51
C22orf39-202ENST00000399562 LOC105371045A0A1W2PR82 267 aa18.19■□□□□ 0.5
C22orf39-202ENST00000399562 SCRIBQ14160 1630 aa18.18■□□□□ 0.5
C22orf39-202ENST00000399562 SALL2Q9Y467 1007 aaPredicted RBP18.16■□□□□ 0.5
C22orf39-202ENST00000399562 EHMT2Q96KQ7 1210 aa18.16■□□□□ 0.5
C22orf39-202ENST00000399562 DCAF1Q9Y4B6 1507 aa18.14■□□□□ 0.49
C22orf39-202ENST00000399562 UBE2Q2Q8WVN8 375 aa18.11■□□□□ 0.49
C22orf39-202ENST00000399562 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.1■□□□□ 0.49
C22orf39-202ENST00000399562 PKNOX2Q96KN3 472 aa18.07■□□□□ 0.48
C22orf39-202ENST00000399562 AEBP2Q6ZN18 517 aaPredicted RBP17.89■□□□□ 0.45
C22orf39-202ENST00000399562 NACADO15069 1562 aa17.87■□□□□ 0.45
C22orf39-202ENST00000399562 TSHZ2Q9NRE2 1034 aa17.86■□□□□ 0.45
C22orf39-202ENST00000399562 DIEXFQ68CQ4 756 aaKnown RBP17.85■□□□□ 0.45
C22orf39-202ENST00000399562 RTN4Q9NQC3 1192 aaKnown RBP17.84■□□□□ 0.45
C22orf39-202ENST00000399562 RSF1Q96T23 1441 aaPredicted RBP17.77■□□□□ 0.43
C22orf39-202ENST00000399562 RB1CC1Q8TDY2 1594 aa17.76■□□□□ 0.43
C22orf39-202ENST00000399562 TRIM41Q8WV44 630 aa17.76■□□□□ 0.43
C22orf39-202ENST00000399562 CECR2Q9BXF3 1484 aa17.75■□□□□ 0.43
C22orf39-202ENST00000399562 TRIM26Q12899 539 aaPredicted RBP17.74■□□□□ 0.43
C22orf39-202ENST00000399562 A0A0U1RQG5 324 aaPredicted RBP17.72■□□□□ 0.43
C22orf39-202ENST00000399562 DEKP35659 375 aaKnown RBP17.66■□□□□ 0.42
C22orf39-202ENST00000399562 BCANQ96GW7 911 aa17.59■□□□□ 0.41
C22orf39-202ENST00000399562 MROH2BQ7Z745 1585 aa17.53■□□□□ 0.4
C22orf39-202ENST00000399562 SUPT16HQ9Y5B9 1047 aaKnown RBP17.52■□□□□ 0.39
C22orf39-202ENST00000399562 KLHL34Q8N239 644 aa17.5■□□□□ 0.39
C22orf39-202ENST00000399562 PDE4CQ08493 712 aa17.48■□□□□ 0.39
C22orf39-202ENST00000399562 NEFLP07196 543 aa17.46■□□□□ 0.39
C22orf39-202ENST00000399562 IL27Q8NEV9 243 aa17.43■□□□□ 0.38
C22orf39-202ENST00000399562 RANGAP1P46060 587 aaPredicted RBP17.4■□□□□ 0.38
C22orf39-202ENST00000399562 TIMELESSQ9UNS1 1208 aa17.39■□□□□ 0.37
C22orf39-202ENST00000399562 PDIA4P13667 645 aaKnown RBP17.37■□□□□ 0.37
C22orf39-202ENST00000399562 NBR1Q14596 966 aa17.36■□□□□ 0.37
C22orf39-202ENST00000399562 RBM19Q9Y4C8 960 aaKnown RBP17.36■□□□□ 0.37
C22orf39-202ENST00000399562 VSIG10Q8N0Z9 540 aa17.36■□□□□ 0.37
C22orf39-202ENST00000399562 ERICH6BQ5W0A0 696 aa17.35■□□□□ 0.37
C22orf39-202ENST00000399562 WIZO95785 1651 aa17.35■□□□□ 0.37
C22orf39-202ENST00000399562 BCL11BQ9C0K0 894 aaPredicted RBP17.34■□□□□ 0.37
C22orf39-202ENST00000399562 CCER1Q8TC90 406 aaPredicted RBP17.32■□□□□ 0.36
C22orf39-202ENST00000399562 BAZ1AQ9NRL2 1556 aaPredicted RBP17.31■□□□□ 0.36
C22orf39-202ENST00000399562 MSH5O43196 834 aa17.28■□□□□ 0.36
C22orf39-202ENST00000399562 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.28■□□□□ 0.36
C22orf39-202ENST00000399562 ZMYND15Q9H091 742 aa17.26■□□□□ 0.35
C22orf39-202ENST00000399562 MYT1LQ9UL68 1186 aa17.24■□□□□ 0.35
C22orf39-202ENST00000399562 GLIPR1L2Q4G1C9 344 aa17.23■□□□□ 0.35
C22orf39-202ENST00000399562 MIER1Q8N108 512 aa17.22■□□□□ 0.35
C22orf39-202ENST00000399562 CLSPNQ9HAW4 1339 aa17.18■□□□□ 0.34
C22orf39-202ENST00000399562 ITGAEP38570 1179 aa17.15■□□□□ 0.34
C22orf39-202ENST00000399562 UBTFP17480 764 aaKnown RBP17.14■□□□□ 0.33
C22orf39-202ENST00000399562 SMARCA4P51532 1647 aa17.12■□□□□ 0.33
C22orf39-202ENST00000399562 CCDC88BA6NC98 1476 aa17.12■□□□□ 0.33
C22orf39-202ENST00000399562 FGD1P98174 961 aa17.11■□□□□ 0.33
C22orf39-202ENST00000399562 RBM10P98175 930 aaKnown RBP17.11■□□□□ 0.33
C22orf39-202ENST00000399562 BICRAQ9NZM4 1560 aa17.1■□□□□ 0.33
C22orf39-202ENST00000399562 UNC13AQ9UPW8 1703 aa17.08■□□□□ 0.32
C22orf39-202ENST00000399562 RTL5Q5HYW3 569 aaPredicted RBP17.05■□□□□ 0.32
C22orf39-202ENST00000399562 NCBP3Q53F19 620 aaKnown RBP17.03■□□□□ 0.32
C22orf39-202ENST00000399562 PLPPR3Q6T4P5 718 aa17.03■□□□□ 0.32
C22orf39-202ENST00000399562 BAZ1BQ9UIG0 1483 aaKnown RBP17.02■□□□□ 0.31
C22orf39-202ENST00000399562 FKBP8Q14318 412 aa17.01■□□□□ 0.31
C22orf39-202ENST00000399562 TOP2AP11388 1531 aaKnown RBP17■□□□□ 0.31
C22orf39-202ENST00000399562 PAXIP1Q6ZW49 1069 aaPredicted RBP16.98■□□□□ 0.31
C22orf39-202ENST00000399562 ABCC8Q09428 1581 aa16.98■□□□□ 0.31
C22orf39-202ENST00000399562 AAMPQ13685 434 aa16.98■□□□□ 0.31
C22orf39-202ENST00000399562 ATAD2BQ9ULI0 1458 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms